Array 1 24791-24562 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV820885.1 Nosocomiicoccus sp. HMSC059G07 Scaffold705, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 24790 31 100.0 35 ............................... TATCTCGAAGAACAAGGATTTAAAGTGAATGTTTT 24724 31 100.0 35 ............................... TGTCAGTCGTGCATAAATTAAGAGACGAATGTTTT 24658 31 100.0 35 ............................... CTAGCGAAATTCTCGAAGAAAATGACTCTAGTTTT 24592 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 4 31 100.0 35 ATTGATAAGCAATTATCGAGAGTGCAAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGATAAGCAATTATCGAGAGTGCAAAAACTCATGTACGCAATGATAAAATCGCACGTGAGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACGATATTAGTGGGTTACTAGATAGAGCCAGAGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAATCTTACTTTACACAGATATATCACTTATACAGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACTTGGAATTATAGTAGTAATTCTACAAAGCCGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACTACCGTTCGCTTTATCTTCGATAAGTATTTGGTTTTATTGATAAGCAATTATCGAGAGTGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GTAAATTAATATGATTTTAAATTTAAAAAAGTTTTATTGATAAGCAATTATCGAGAGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGATAAGCAATTATCGAGAGTGCAAAAACAACTAACGAACTAGAGACTTATTTAATGCTGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACCTCAAATAGAGGTTTTTACATTCGAAATCCTTTGCTTTTGAGATAGTTTTCTTCTAAAGTTGTAATCTTTCTATTTTCAACTTCAAAATTTGAATCGTCATTCAGTATATCTCTCAATACATACAATAATACCATATCTTTATGCATTAGATAATAATATGTACGATTATAATCTCCTATAAAGTTACATACTCTAAAGAACGAGTTTAAAACGTCGACTTTACTTTCCACTAATTTACATG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGATAAGCAATTATCGAGAGTGCAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 25189-24888 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV820885.1 Nosocomiicoccus sp. HMSC059G07 Scaffold705, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 25188 36 100.0 30 .................................... GATATTAGTGGGTTACTAGATAGAGCCAGA 25122 36 97.2 30 ...................................T CTTACTTTACACAGATATATCACTTATACA 25056 36 100.0 30 .................................... TTGGAATTATAGTAGTAATTCTACAAAGCC 24990 36 100.0 31 .................................... TACCGTTCGCTTTATCTTCGATAAGTATTTG 24923 36 91.7 0 .................................NNN | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 97.8 30 GTTTTATTGATAAGCAATTATCGAGAGTGCAAAAAC # Left flank : TATCGAGAGTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGATAAGCAATTATCGAGAGTGCAAAAACGATTTAGGTTGTTGGTATTGTCGATAAGATGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACAAGAAGTCATGAAAGAGTACGGTAAATCAGGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACTATTTTCTATTGTCCTTAATGATGGCGAAGGTTTTATTGATAAGCAATTATCGAGAGTGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGATAAGCAATTATCGAGAGTGCAAAAACTCATGTACGCAATGATAAAATCGCACGTGA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGATAAGCAATTATCGAGAGTGCAAAAACTATCTCGAAGAACAAGGATTTAAAGTGAATGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACTGTCAGTCGTGCATAAATTAAGAGACGAATGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACCTAGCGAAATTCTCGAAGAAAATGACTCTAGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACGTAAATTAATATGATTTTAAATTTAAAAAAGTTTTATTGATAAGCAATTATCGAGAGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGATAAGCAAT # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTGATAAGCAATTATCGAGAGTGCAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 26621-26388 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV820885.1 Nosocomiicoccus sp. HMSC059G07 Scaffold705, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26620 35 94.4 30 ....C....-.......................... TACTAGCACTCGGACTATTTGTCGCAGTGC 26555 36 100.0 30 .................................... TCGTTCAGCACGTACTCGAAGTTGTTTTGA 26489 36 100.0 30 .................................... AGGAATCCTTCGCGGACAAAACCGTCTGTT 26423 36 91.7 0 .................................NNN | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 30 GTTTTATTGATAAGCAATTATCGAGAGTGCAAAAAC # Left flank : TTGAGTAGAAAGTCTACAATATTAATCACACCTTAATACTTTTGAACAGGAACGTTGCAATTCTCTACCACATATTTTGTAATATTAACCACCATAAGAACTTAACTTTTTCTCTGTCAGTAAAAATATCAGTATAAATCCAACAACAATGTTTACAGCTTGGAAAATTATAGACCATATAACAATGGTATCTCCTAATAAACCTATTAATGAAAGAATGTCGATTACAACAAAGGGCACCAATAAAGTTGAAATGATAAAGAATATTTTATACATCAATTCAAAAGCTGTTTTTTGTGCGAGATTCCAATTATGATCATTAGCCAAAGCCCTCTTAGTTCTATAACCCACAAAGTTATTTGCTTTTTTAATAGGTTCCTCTTTAAAAAACTTCCCGATTAGACATAAAATGATAGTTGCATTTATTAGCATATCATCTTTCCCCCTCTTCAATGACTTGCGATGTAAGGGTCCTACCGCATAGTACCATTTTAATAGTT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGATAAGCAATTATCGAGAGTGCAAAAACGAATGAACGAACTAGAGACTTATTTAATGCGTTTTATTGATAAGCAATTATCGAGAGTGCAAAAACAGTAAGCCATTTTACCGCTACACCAAAATAAAGAAGAGCATTTAATGCTCTTCCTTATTTTTACTAATCTTTAACTCTAATGAAATATAAGAAATTAGTCCTATTCCTAAAGCTATAAAAGTTAATATATACCATGAGTACATATCAAATTTAAAATTAACAGTATATAAAATTAATAAACAAATTATATATACTAACAACCACAATAATCTTTCTTTCATGACCCAACCAACTTCCTTTTTAATTGTAATGAAAATATACTGCTAGAAAAATAAGAATAAGATCAATAAATAATATTCCTGCCAT # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTGATAAGCAATTATCGAGAGTGCAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //