Array 1 80863-79815 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSKS01000030.1 Streptomyces marokkonensis strain OANH409 Scaffold30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 80862 28 100.0 33 ............................ CCGCCCGGTGCGGCGCCGGGCGGTTCCAGGTGT 80801 28 100.0 33 ............................ CCGGTAGGTGCCGGAGGTGAGTCCGGCGTTGAC 80740 28 100.0 33 ............................ GTGGACGCAGGACCAGAAGGACCGCGCCCTCCT 80679 28 100.0 33 ............................ GCCCGGAGCGGTGAGGCTCCGGGCTTCATCGGC 80618 28 100.0 33 ............................ CTCGGCCATGCGCATCGCCGAGGCCTACGACAT 80557 28 100.0 33 ............................ CGGGAGGGGGACCAGCGGCCCGGGTGCCTGCCC 80496 28 100.0 33 ............................ TGGCACATCGCCACGGACTGACCCCCGAAGCCC 80435 28 100.0 33 ............................ TGCTGTCGGCCAGATGATCAAAACCGGTCTGGC 80374 28 100.0 33 ............................ GCGCTGAGCGGCCGTCTGAGCGCCTGTGAGCCT 80313 28 100.0 33 ............................ CGGCACCAACGTTCCAGGGGTTGGTCACGTCGG 80252 28 100.0 33 ............................ CTCCTCCAGGACCCGGGCGACGACTCGTTCACC 80191 28 100.0 33 ............................ GGCCACCCGGCTGATGCGGGACTGTGCCCAGCG 80130 28 100.0 33 ............................ TCCCAGTACGTCTTCTTGTGCCGACGAGGCTTC 80069 28 96.4 33 ........................A... CACGGACGTCCTCCCCGTCGTGACGCGCGAACC 80008 28 82.1 14 ..............C.....A..A.AC. ATGCACACGCGTTT CCG [79987] Deletion [79967] 79963 28 96.4 33 ........T................... GTGCGAGGCCGTATGACCACCCCCGTGCTTCCC 79902 28 100.0 33 ............................ GATCTTCGTCAGAGAGCCGGTCGTCGTTCTGAA 79841 27 92.9 0 .....................-.C.... | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.2 32 GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Left flank : TGCGGGGGTTGCTCGTCAGGCAGTGGCAGGGCGCCATGAGGTCGCA # Right flank : TATGAACGCCTTCCAGCGGGACTCCGCAACTCGACGCCCAGTACTCAGTCAGCCTTCGGTCGCATGCCGGTGCGGAGGCCATCGCTCGGTTGCGGAGAGCGGGTCTGTTGGAGAGCTGGCTGGGTGCTCCACGCGATGTGCCGCAACTCCTGTTGTAGCGCGGCGCGAGTTGCCTCGTCGGATGCGTGCCGGCGCGGAGCCTCAGCAATGATCTGCCGACGCAACCGTTGCTCGGATTGAAGCTGCTCAACGACCACACGCAGGTCACTGGCCCTGCTGCGCAGCGCAGCGGCATTGCAACGGGCATGCTGGGCGGCTTCAGTGCGGACCGTGTCGATCTGCATGGCCACCGTGGGCAGGTGAGCGTGCATCGTGGTGAACCACTGCCGCATGGCTGCTGGGTCATCAGGAACTTCGCCGAGCGCGCCGTGGGCGCGGAAGACCTCAGCGTACGGGGAGGTGTGCAGCATCTGCCAGGCCCGCTGGCGGGCAGCGGCGGC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 67731-66971 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSKS01000031.1 Streptomyces marokkonensis strain OANH409 Scaffold31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 67730 28 100.0 33 ............................ CGGTATCCGCGCGTGTCGCATCTGTCCGAGACG 67669 28 100.0 33 ............................ GGTCGCCAGGCGACCGGTGGTGCCCCCGTCGGT 67608 28 100.0 33 ............................ CTTGCCCCCGCAGCACGGAGCGAACGGCTCGCA 67547 28 100.0 33 ............................ GATCTGATAGTTGCGGTTCTGCGCCACTCCGGC 67486 28 100.0 33 ............................ CCGTGGACGACAGCGACCAGAACGACCATCCGG 67425 28 100.0 33 ............................ TCCTGCGGACGCTGCTGACCACACCGGGCGTGC 67364 28 100.0 33 ............................ GCGCCAGAACAACGCCAATGCTCGCTACTTGAG 67303 28 100.0 33 ............................ CTCGCCGAACGCCGCGCCATGCTCGCCGAGGCG 67242 28 100.0 33 ............................ CCAGCCGGCCTCACCGGTCGGCCTGCCGTTCGC 67181 28 100.0 33 ............................ CTTCTTTCGTCTGGTGTGGTCAGGGGCTTCTGG 67120 28 89.3 33 .......................TTT.. CCAGGCCACCTACGGGTTCCGGGGCGCCACGGA 67059 28 71.4 32 CC......T..A.AC..........T.T TTCGGCTCGTGCGCCGCTCCGGGTTCTTCTCT G [67036] 66998 28 71.4 0 ......T.G.GA..C.G...CA...... | ========== ====== ====== ====== ============================ ================================= ================== 13 28 94.8 33 GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Left flank : ATGCCGGACGAGGACCTCGGCGCCCTCTGGGACGACGGCGACACCGTCGTCAGCAGCGGCCGTAACTGGAGCGCCACGCACCACCTCGACATCATCCCGGAACCCACCGACCCCGCCCCCGCAGGGACGGCCCCGTGAGTGCCGGAACGACTGTGGTCGTGCTCATCGCGGCCCCACCTGGGCTCCGCGGACACCTCACCCGCTGGTTCGTCGAAGTGGCCGCCGGCGTCTACGTCGGGAACCCCAACCCTCGGATCCGTGAACGCCTCTGGAGTGTCCTTGCCGAGCGCATCCACGATGGACAGGTGGTCATGATCGAACCAGCGACCACGGAACAGGGCTGGACCGCCCGCACCGCCGGGCGTGACCGCTGGACCCCCGTCGACTTCGACGGCCTGACCCTCATTGCCCGCCCGCGCCAGAGCGGACAGCCCTGGCGGCCCGCGAACGAGGTAAAGCAAAATGGCATGATCACCTAACAACACCGCAGGTCACGAAGT # Right flank : CATTGAGGGGCACTCATGTCGCTCACAAGGGTCGCTTCCGTCGGTGCCTACGGTCCCCGAAGTCCTGTATTCACCGGTGAGGTCACGCGTTGCCCAGCTGCTTGGCCGAGGCGCCAGTGGGCACCGCAAGCGCGTACGACCGTTCCCGGATGTGGCGCACGACCTGTGAGTCGGGGCCGTGGATGTCGCCGGCGATCGTCAGCAGGTCGGCGCCCAAGCGCTGCCGGTCGGCCTCCGGCGGCATGGCTCGCCACAAGCTGTAGGCGCGGCGGGTGGCCGCCTCGACGTCGGGGTGCCCGGGGCCCTGGATGGTGACGCGCAGCTGCGCCGCGTGCAGGTACCACGACAGGCCGGACGGATGGTCCCCGGCGAGGGCGGCCAGGTAGCCGCGTACTTCGCGGACCTGGATCGTGTGCAGATGCAGTTCTCCGTACTCCGCGGTGACGTCCTCGTCGAGCCGGGCGGCCAGGGCGGCGGCATCCGCCAGGTGCCCGGTCCGC # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 78232-79175 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSKS01000031.1 Streptomyces marokkonensis strain OANH409 Scaffold31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 78232 28 100.0 33 ............................ GGGGGCTCCCCTCCGTCGGAGTCTGCGGAGCGC 78293 28 100.0 33 ............................ CTACCCCTTCCCGTTCGTCCGCGCGGACGCCGT 78354 28 100.0 33 ............................ CGGGTCCACGGGCACGGTGTGGCTGGCCGACGG 78415 28 100.0 33 ............................ CTCGATCACCTACGCAGGCCCCGACCCCATCAG 78476 28 100.0 33 ............................ CCGGGCAGCAGCGATGGCGATCTCCCGACGGGC 78537 28 100.0 33 ............................ GATGATGTTGCGCACCAGGCCGTCGAAGGTCTG 78598 28 100.0 33 ............................ GTTGCTTGGCGTCCTCGGCCCGGCGCAGGCCGC 78659 28 100.0 33 ............................ CACCACCTCCGCCACCGAGATCACCACCTTCGA 78720 28 100.0 33 ............................ GTGCGCCCATGCGCGCCGTGCACCTCTGGCCAT 78781 28 100.0 33 ............................ GGCGTGCCCCAGGGTGTGCAGAGCGCGCGTAGG 78842 28 100.0 33 ............................ CCAACATCACCGGGATGCCGAGCAGAGCGACCA 78903 28 100.0 34 ............................ TCCGCCGCCAGCTGCATCACCTGCACCCCCGCCG 78965 28 100.0 33 ............................ GCGGGCGCGGGCGGCGCGGTCCTGCTCGGCCTC 79026 28 100.0 33 ............................ CCTCTGGCGGAAGTGGCGGAAGACTCGACGCCA 79087 28 100.0 33 ............................ CATCATCGGCGAGCCCGAGGTGTGCACCCTGCC 79148 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 16 28 100.0 33 GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Left flank : CTGCCGGTCCGTCGAAAGCCGCCCCCACGTCAGCCCCGCTGCCAGCACCGGCGCGGCCTCAGCGGCATCCATGGTCTGGAACGCGGGGCACGCCTTCCCGCAGTCGTGGATGCCGCACACCCACATGAACCACAACCGCCCCCGGCCACCACTGATCTCGTCCAGCCGCCGCCGGAAAGCCGTCGACACGTACCTGTCCCACATCACCCCCGCCACAGCGGCCGTATCCAACAGGTGCCCCAGCAGCAGATGCGTTCGTCCGCCGTTACGCGCGGCTGACTTCCCCCACAGCCGCGACACCCGCTCGACGGCCTCCGGCGACAGCCGCATCGCCTTCATTAACTCGACGATCGAAGCCTCACGATCCACGGAACCCCCCAAATCCAATGTCCCGGCACCATAGGCTCTGCCACTGACATCGCTTGGGGTGAGGACGACAGAACTGAATCCAGGCTAATGAAAAGCGCAGATCTTGGTAGCGTCACTGCAGGTCAAGAAGT # Right flank : GCCGGTGATGTCGATCGATCGGTTGTCGCGGTCGTCGTCCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 54-874 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSKS01000068.1 Streptomyces marokkonensis strain OANH409 Scaffold70, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 54 28 100.0 33 ............................ CACGCCGACCGCCACCCTCGCACCCAACGAGGT 115 28 100.0 33 ............................ CGTGTTCCGGTCCAAGGACGTCGCCGAGCCGCC 176 28 100.0 33 ............................ CTGCGTGCTGCACTACGCGCAGACACACCGGCC 237 28 100.0 33 ............................ CGACGCCCCGCCCCGGTCCGCGGAGTCCTATCG 298 28 100.0 33 ............................ CAGCGGCCCGCCCTCGACGCGGAAAACGAGGGC 359 28 100.0 33 ............................ CGCCGCTCCTCCTTCTACGCCTACCGCGCCGCA 420 28 100.0 33 ............................ ACGGAAACCGGAAACCGTGACGGAACGTAGGGG 481 28 100.0 33 ............................ CTGCCCGAGTGGGTCCCCGAGGCCCGCCGTGCT 542 28 100.0 33 ............................ GCTCGCCGACGGCGGCGTCCTGGCCCTCGTCCC 603 28 100.0 33 ............................ CGCGACCGTGACCACGCCCCCGGGCCTCGGCGC 664 28 100.0 33 ............................ CGTGACCAGGGCGGGCGCGCGGAACACCACCTG 725 28 100.0 33 ............................ GGTGACCGAGCACGTGATGCCCATCTTCACGGG 786 28 100.0 33 ............................ GTCAGGCAGTGGCAGGGCGCCATGAGGTCGCAC 847 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 100.0 33 GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Left flank : CGCGCCTGCGGGGGTTGCTCGCCGAGACGGGATCGCTCCTGCTGGATGTCGTGG # Right flank : CCGCCCGGTGCGGCGCCGGGCGGTTCCAGGTGTGTCGTCCCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [25.0-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //