Array 1 174701-177413 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVNT01000008.1 Leclercia adecarboxylata strain Palotina Contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 174701 29 100.0 32 ............................. AGTGTTGCCAGCTTAACGCCCTTCATCGCTGG 174762 29 100.0 32 ............................. ATGGTGATGATTTCCTGATCGAGACAGCAACC 174823 29 100.0 32 ............................. TCTTTGAACGCGATCAGGTTGATAACCGGAAA 174884 29 100.0 32 ............................. CTCCCGCAATACGGGCAAAGCGGGATAGTGCC 174945 29 100.0 32 ............................. GGACTTGATCGAAATCAGCGCCAGCCCGCAGG 175006 29 100.0 32 ............................. CAATTCCTGTTCTCAGGGTGAACGAATACGCA 175067 29 100.0 32 ............................. CAGGCGCTGGCACTGGCGCAGGGTGGAAAGGC 175128 29 100.0 32 ............................. CGGCTGCGGCTCTCGCCTTCCTGCATACCGGA 175189 29 100.0 32 ............................. ATATAGGCTGGCCGTGTCGCCGAAAAACGAAG 175250 29 96.6 32 ......T...................... CCCCTTTGAGGACGCAGGCCAACCGGGATCGT 175311 29 100.0 32 ............................. TTGTAAACAACTTTTACTGTCTGCCCCAGAGC 175372 29 100.0 32 ............................. ATGTTTATGCGCAGTACCGTGAGGCGATCCGT 175433 29 100.0 32 ............................. GCGTAGAGCTGTTAAAAAAGGAGGGCCTTGAG 175494 29 100.0 32 ............................. GCGTAGAGCTGTTAAAAAAGGAGGGCCTTGAG 175555 29 96.6 32 .....A....................... AAAATAGTTTGTACGTGCAGCTTTTGCAGTTA 175616 29 100.0 32 ............................. CCCGCACGGACTGGGCACCGGTGCTGCTCGAC 175677 29 100.0 32 ............................. GCGCGTGAATTTATCGACGCCTGCGCAATGTG 175738 29 100.0 32 ............................. AGCACTGAACATCCATGCAGCGTCTCTATCTA 175799 29 100.0 32 ............................. TAACCCACAGGCATCATTGCCCCCATCACATC 175860 29 100.0 32 ............................. CGTTTTTGGGTCGTGATAGCGAGATGGCCATA 175921 29 96.6 32 ............................A CGATCCCTTAGTACGCGGAACAAGTTGACCAC 175982 29 100.0 32 ............................. AGGCTATTCAGGATGACGATGCTGATTTTGTA 176043 29 100.0 32 ............................. CTCACGATATACCGTGACCGGCGCACCGCCGA 176104 29 100.0 32 ............................. CCAGTTTTCAGCACCGTTACGGCGACAGAATC 176165 29 100.0 32 ............................. ACCACTATCGAACTGAACGACCTGCTGCCAAA 176226 29 100.0 32 ............................. AACATGGGCTGTGAGTTAGCTGGAAACGAATT 176287 29 100.0 32 ............................. AACCAGCGTCCCACGGGCGTGCCGGTTGAGGT 176348 29 100.0 32 ............................. CCTCACCAAACGTCAGATGCATTCCGTGCTGA 176409 29 100.0 32 ............................. AAAAAACAATCCAGTGCTTTATTCAATAACGC 176470 29 96.6 32 ............................A ACGTCAGCCGGGTTATTGTTCACCCACGAGCG 176531 29 100.0 32 ............................. CGGTCGGCGCAAAAATCCGCGCGTCGCGGGAA 176592 29 100.0 32 ............................. CTCACCTCTATCGCTATAGTAGAAACATTGAA 176653 29 100.0 32 ............................. GTCGCTGGGTATGGTTTATTTTGCCAGTGGCT 176714 29 100.0 32 ............................. CGTATTTATCTGACAGCGCGGCCACGCCATTG 176775 29 100.0 32 ............................. GTAATATCACCTTGATTCGTCGGCTAAACGGG 176836 29 100.0 32 ............................. CGCAAAGAAATTCATCCGAGCCGTAGCGCTCT 176897 29 100.0 32 ............................. TTCAAACAATTAGCCGGTGCCGTTCGCAAATT 176958 29 96.6 32 ............T................ AAGAATTATACTGATAACTCTTCACGTCAAAC 177019 29 96.6 32 ............T................ TTCCGTATCCTACCCGCGTCCGTTGGTCTGGA 177080 29 96.6 32 ............T................ ACAACCCAGATCGGAGTAAACCAGTTTAGTGA 177141 29 96.6 32 ............T................ AAGCCTTTCGACGAAGTAGAGCAGATGGCAAA 177202 29 96.6 32 ............T................ GATATCGCGCGGTGGGACGCGCGGCAGCGGGA 177263 29 96.6 32 ....................T........ GTATACGCCAGCGCCAGCACCGGAACCATTAC 177324 29 96.6 32 ..A.......................... TAGGATAGTGTAGCGCGGCCTGATACAACGTA 177385 29 79.3 0 ..C........CTT...........C..A | ========== ====== ====== ====== ============================= ================================ ================== 45 29 98.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTTCTGGCTGCCGGTGAGATTGAGCCGCCAAAGCCTGCGCCAGATATGTTGCCCCCCGCAATTCCTGAGCCTCAACCGCTGGGGGATAGTGGCTATCGGGGGCGCGGCTGATGAGTATGGTCGTTGTGGTCACAGAAAATGTACCGCCGCGTTTGCGGGGAAGGCTTGCCATCTGGTTATTGGAGATCCGGGCTGGGGTATATGTTGGTGATGTCTCTAAACGCGTGCGGGAGATGATCTGGCAGCAAATCATCCAGTTGGGTGGGATTGGAAATATCGTTATGGCCTGGGCGACAAACACGGAATCAGGTTTTGAGTTTCAAACCTGGGGGGAAAACAGACGCATGCCGGTAGATTTGGATGGGCTGAGGTTGGTTTCCTTTATTCCTGTTGAAAATCAATAAGTTGAAAGCTCTTTAATAATATGGAAATGTTGGATTAAGGTTGGTAGGTTGTTGGTTGCTGAAAATTTCTATTAAAAACAGCAAGATAAGATTAGT # Right flank : ACGACTAATCTTACTCCGTATAAAAATAAACAGAAAAATGCCCAGGCACCGTTTGGGTGATGCACTTTATCAGGCTTTTTTCCCCGCTTTCGCCAGTTCCTTCACCAGTGGCAGCATAATGCGCACCACGTCCCGGCTGCGGTGTTCAATCCGCTGCGGGAGGGCCTCGTCGATATGCTGCAGATTATCCAGCCTGACGTTATGCCAGCTCGATCCCTGTGGGAAGGCTTTTGATTTTGCCCGCTGCTGATAACCGTCTTTCTTACCTAATGACCAGTTGGTGGCCTCAACATACAGCACCGGGATCCCGGCTTTATCGAAAACTTCACCGTCATTACAGCATCCGGTGCCTTTCGGGTACGCGGCGTTGCCACCCGGGTTGGTCGCGGCAAAAATCCCGTGGGCGCGGGCAATCGCCAGCGCGCGGTCGCGGGTCAATTTACGCACCGGGGCAGGGGTGGTTTTTCCGCTGTTAAAATAGAGTTTATCGCCCACGATTA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //