Array 1 139949-137922 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHQF01000036.1 Bifidobacterium longum subsp. longum strain MCC10025 contig0036, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 139948 36 100.0 28 .................................... AAGAGCCTCGAAGGGTTCAAAGATGATG 139884 36 100.0 28 .................................... CCAGTGACGTGCATGACGCGTCCGGCTC 139820 36 100.0 29 .................................... CATGACATGGCCGCATATGGTGTCGTGAG 139755 36 100.0 28 .................................... AACCTGTTGGCCTGGTCCCAGTCGCTCG 139691 36 100.0 28 .................................... TCCACCGACGTGATGGACAACTACACGA 139627 36 100.0 28 .................................... GAGGCCCGCGACCTGATTTCCAGCGGCG 139563 36 100.0 28 .................................... GCCTCATGATGAAGAGTCGCAAATCATC 139499 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 139434 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 139370 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 139306 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 139242 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 139178 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 139114 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 139050 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 138986 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 138922 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 138858 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 138794 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 138729 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 138665 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 138601 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 138537 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 138472 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 138407 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 138342 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 138278 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 138213 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 138149 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 138085 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 138021 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 137957 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 32 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCGGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //