Array 1 116-2535 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCDX01000027.1 Moorella thermoacetica strain ATCC 33924 MTAT_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 116 30 73.3 35 CAGG.GGAA..................... CAGTTGTTCCAAGCGGCTCCTCAAGAACTTAAACC 181 30 100.0 37 .............................. AATCGATACTCCAAGAGGAAAACGTAAAAAAACGTTT 248 30 100.0 36 .............................. CTTTTAGGTTCCCTCATGCTAATCAAAGTTTTCAAG 314 30 100.0 38 .............................. TAGAATTGAGGTGTTTTTTATGGGAAAAAAGTTATTAG 382 30 100.0 36 .............................. CAAACCTAGGTGGGCCATCAAAATAAAGATTATATT 448 30 100.0 36 .............................. ACGGGATAAGTTTGATCTTAAGTGACGGTATACCTT 514 30 100.0 37 .............................. TAAAGAATTACAGCAAGGTGTCTTTGCGGTCACTGTG 581 30 100.0 35 .............................. GACCCAGGCTGACGACTTCCCAGGCCAGTTCAAGG 646 30 100.0 35 .............................. TTCTAAAAAGAGTGCCATCCGTACCACCGACATAA 711 30 100.0 37 .............................. AGGCTATGTTACATTCTTTTTTATCTATCTCATCTGC 778 30 100.0 35 .............................. TTCGCATCGATTAGTCATCCCTTTCCCGGCTCCTT 843 30 100.0 35 .............................. TACTGGGCGAATGATGAAGGCTGGAGAACTATTGA 908 30 100.0 36 .............................. CTAGGTTAATCCTAGCAGGAAAGAAGGAAGTAAATA 974 30 100.0 35 .............................. TCTGCAATGTCAGCCAGAGCATTACCGTGCTATCT 1039 30 96.7 38 .................A............ GGGTCTGTCGGGAGTGGCAAAAGCTATCATGCTTTAAG 1107 30 100.0 37 .............................. CAGGTGTCCAAAGATTAGATGCATTTTTAAACCACGG 1174 30 100.0 37 .............................. ACCTGGCTTGTTGTTTCGGTTCTGGAGGTCGCTCCGC 1241 30 100.0 35 .............................. TCTCAGTAAATCCCCCGCCACCCCGGCTGTTCGGC 1306 30 100.0 37 .............................. TAGTCACTGGCCGTGAATATGTCAAGCATAAAATTCA 1373 30 100.0 36 .............................. TAGGTATTTCTTGCAACATATCTAGCGTATTTTTGA 1439 30 100.0 35 .............................. TTTGCCCTTAAGCGGAGGGGGCCTTCCGGCCCGGC 1504 30 100.0 37 .............................. AACATTCTATAGTTTACGCTGTTGAGAGACTTTATAC 1571 30 100.0 36 .............................. CAGCTTGCGTAAGTACCTGCTCGATAGAAAGAGAGC 1637 30 100.0 36 .............................. AAGTGCAACCCATACTTCGACAGGTTTAAACCCCAT 1703 30 100.0 36 .............................. TTTCAATAAGTTGATAGATATGAACTATGTGCAAGG 1769 30 100.0 38 .............................. CTCCAGGCGGGTAATCACCCGGACCTGGAGGTCGTCAA 1837 30 100.0 36 .............................. TTAATCTCGTTATAGAGTTTCCAAGCATTGGGATAA 1903 30 100.0 38 .............................. TGCCTTCGGCGTACATCCTCACAAGGGCCGGCGCCCAC 1971 30 100.0 38 .............................. GCGGGCTTTTCGTAGGAGGGATAAACCCTCTTTGCGTT 2039 30 100.0 37 .............................. GCGGGCTTTTTGTAGGAGGGATAAACCCTCTTTGCGT 2106 30 100.0 35 .............................. GTCGCGACTTGGAACGCCTGTATACCCTCTACCGC 2171 30 100.0 37 .............................. TTGATTTGCCGCATTGAACGCAGGAGTATTTATGTTT 2238 30 100.0 38 .............................. GCGGATATAAATTTCTCTTTTCTGCCGCCTGACTTCTG 2306 30 100.0 36 .............................. TATTGCATAGTATAAAACCTCCTTTTTGTTTGCCCT 2372 30 100.0 38 .............................. ACGTAGCGAATGTATGTCTCATAGTATGCGGGTGAACC 2440 30 100.0 36 .............................. ACGGCGTATTGATGGTTTCCGCTTCAACGCCACCTA 2506 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 37 30 99.2 36 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : GTTTTCTTGTTTGCTCCTACTTACAAGATTCGATCCAGAGGATGGTAACTCCTTCTGTTTTGCTAAAAATCTAGTCGGTTTTCTGAGATGCTAAATCTTTTAGCCCTGAGTTTTTC # Right flank : CAAGGCGCTACCGACTCGGCGATTACATAGCCTCCAGTGTAGATCGTAAAATAGAATTGACCCAGGATCGTCAAATAAAACTGACCCACCTTGTGATAAAATCTCCCCTGAGAGGGGGAGGAAAAAGAGGTGGTCAGCATGTACAAATGGCAGCGCATCAAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 5836-169 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCDX01000010.1 Moorella thermoacetica strain ATCC 33924 MTAT_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 5835 30 100.0 35 .............................. AATACCTGGGGCAAGACGTGGGGGGACTTAAATAC 5770 30 100.0 36 .............................. TCCCGCTGATGGGCATTATCCTGGGTGGGTATTTCG 5704 30 100.0 36 .............................. CTAGACGCATGGCGGAAGAAGGGAAGACAGTAGAAG 5638 30 100.0 37 .............................. CCGCCATATAGTGCTGACACTGTAAGACGTACTCATC 5571 30 100.0 35 .............................. TCGACCTGCCGGAAGGCTCCTGGCGCGGTGGCCAT 5506 30 100.0 36 .............................. ACGTCCACCGGCACGGCCCCGCTGGCCACGTTTTTC 5440 30 100.0 36 .............................. CGGTGCATTTTCCCCGGCCTTGGGAAAGGCGGGACC 5374 30 100.0 36 .............................. CAGGCCCGCTGGGAGCCTATCTCGGCAAAAAAACAA 5308 30 100.0 36 .............................. GCATTTCATTTATCCGCATACCGCTATAGATCAAAA 5242 30 100.0 36 .............................. AGATAACAGGTAATGGCTCACCATCCAGGCATTGCG 5176 30 100.0 37 .............................. TAAACTACCTGGGCGTAAATATCCCTGGCACCAGCGA 5109 30 100.0 36 .............................. TGCTGCCATCTTCTGCCGGCTCTTTTTCTCCGCCTT 5043 30 100.0 35 .............................. CCGCTTCCATATCTCCTACGGCGTACCACTCCAGA 4978 30 100.0 35 .............................. CTGGCGCCCAGGAGGCCGTCATTTTGTACCTCAAC 4913 30 100.0 36 .............................. TAAATTTGCCCCTAGCTTCGCGGTCGCCGGGGTAAA 4847 30 100.0 35 .............................. AGTAATTCTACGCCCTTATTCATTATTAAACTCCT 4782 30 100.0 37 .............................. TCAAATCGTTGACGCGCAGATGGCCGCCAGAAAAGAA 4715 30 100.0 36 .............................. TCTCAATAATTTGTTTATGTCACATCCTAAACATTA 4649 30 100.0 34 .............................. ACAGTAACTTTCCCTGTGGAGGGGTCGAACTCTA 4585 30 100.0 35 .............................. TACCAATTCACCCACAGGTTGTAGATTTACTACGG 4520 30 100.0 36 .............................. TATTCCTACATATTCCAGTGCTTCTTCAGCATTCAT 4454 30 100.0 37 .............................. ACACATTTTGTGATAAAAACATATCACATACATATAT 4387 30 100.0 37 .............................. TAGAGAATATCCAACACCGCCCGGTGGTCCACCTGCT 4320 30 100.0 38 .............................. AGCGGCTCCCCTTTCGGGGAGGTACGGGCTTGCACCGT 4252 30 100.0 39 .............................. GAAGTGACGCCACAACTGGCGCAAATGAGGTTGAATATT 4183 30 100.0 36 .............................. CACCTTTAACCTTGAAACTTTTAGCGTTTTCCTCCA 4117 30 100.0 37 .............................. ATCTTCTGCGGCACGTTTGCAGCCGTCGCTCCATAAC 4050 30 100.0 37 .............................. AAAAGGAAATTGGCATTTGGAGCAGGCGACAGAACAA 3983 30 100.0 36 .............................. TACACAAATACAACTTCCTGGGTGGTATTGTAGGGT 3917 30 100.0 37 .............................. TCTGCTCTAAGCGAACGTTTTTTGTTTTTGCGATTAA 3850 30 100.0 38 .............................. GTATATCACGTTGCTACGTTGTTGTCAATGCATTTTCG 3782 30 100.0 37 .............................. TAAATATCTTCGGCGATTTGTAATTCCCCCGACGGCA 3715 30 100.0 35 .............................. TATGCCGCGTGGAATATATTGGCAGGATGGTGGTA 3650 30 100.0 35 .............................. TCGCTTGCGATGACGATTTCCTCATAGCTCCCGTT 3585 30 100.0 35 .............................. CACTCTGGTATAACCTCGATAAGCCGCTGCGCGGC 3520 30 100.0 38 .............................. CCATTTTGGAGACACTGTTAACTTAACCAAACTAAGAA 3452 30 100.0 35 .............................. AAGCATCTTTATTGCCTGTCGCCTTCCAACAAAAA 3387 30 100.0 36 .............................. TCTTTGTAATGTCGCCGATGTCCAGCTCACTCGATG 3321 30 100.0 39 .............................. TTCCCATCCTGGCCGGCCTGGCGGTAGAGTACCTCCGGC 3252 30 100.0 37 .............................. AAGGCGTATAAGTACAGCTCCAAGACCGTACTAGTGC 3185 30 100.0 37 .............................. CCGGCCTCACAGCGGCCTGGTATGAGAAAAAACTTGA 3118 30 100.0 36 .............................. GAATATTATAAAGCGGCTTTGCGCCTGTAATATGCG 3052 30 100.0 38 .............................. AATGCACGCGGGCACGCAGCTTTTGCTTCCTCTTCGGA 2984 30 100.0 38 .............................. TTGTAACGGAACCACTCGTAGGCGCACTTGGTGCTCTG 2916 30 100.0 36 .............................. CTGTTCAACCGCAGTATTTGTTTTTTCGCTCATCTA 2850 30 100.0 36 .............................. AATGCACGCGGGCACGCAGCTTTTGCTTCCTCTTCG 2784 30 100.0 36 .............................. CAAGCTCGGAGTGAGCCTGCGAATACCATTCCGGCC 2718 30 100.0 35 .............................. GATGCAAGCCGCCCATTCAAAGGCGGCTTCTCCTA 2653 30 100.0 36 .............................. ATTTAAGCTATATACCAGTAGAATTATGGGAACAAA 2587 30 100.0 35 .............................. CCCGATACCACGGCAGCTAATGATCTGCGTATCAG 2522 30 100.0 36 .............................. ACGTAGATAAGGAGCTATACTGGAAGATTGTCGCCT 2456 30 100.0 37 .............................. GATGCAAGCCCATTCAAAGGCGGCTTCTCCTACCTCT 2389 30 100.0 38 .............................. TAATTTTCTCCCCTTCAAAGGGGATATAAATTTTTTGG 2321 30 100.0 36 .............................. AGAAAACAAGGAAAGTCTTTTCGAGAAATCGCTGAA 2255 30 100.0 36 .............................. GTGATCTCGTCCACGGTCATATAGAGGTACTTTTCA 2189 30 100.0 36 .............................. CACATATTTTTACCTCCTATTGCCAATAATTTTATA 2123 30 100.0 37 .............................. GGATTCTTACAATACCGGCTACAACATTAAATAAATA 2056 30 100.0 37 .............................. CTCTGGTTCGCCGTCAGAAGGTTCGTCGTTCCCTCTG 1989 30 100.0 38 .............................. CGGGATAGCGCCCACCGGATAAATCACTGCCGCCAGAG 1921 30 100.0 38 .............................. TAGTCAAGGAGGTGTAAGTATAGAGCAACCTTTGTCTG 1853 30 96.7 36 ...........T.................. ACCTAAATATTCTTCAGGAGTGTAAAATCCTTTTGA 1787 30 100.0 36 .............................. GTATATCACGTTGCTACGTTGTAGTCAATAGACTAC 1721 30 100.0 36 .............................. ATAGTATTTGAAGTTTATCATCATGCTCAAAGCTTA 1655 30 100.0 37 .............................. AAGTTCCTCTAAATAACCTGAGTTCTATAGTATTTTC 1588 30 100.0 36 .............................. ATCCTCCTGCCTAGCGGGATAAACCTCTCATCAGTC 1522 30 100.0 37 .............................. TCAGTAAGATCATTATTAGTAGTGTTGGATTTACCGT 1455 30 100.0 38 .............................. TCTCGTCGCGAACATACGCCGGTTCTCCGGCGCGGATT 1387 30 100.0 36 .............................. ATCGCCATTGAATGGAAGTCTTCTTTCCATCGGCTA 1321 30 100.0 35 .............................. TGGAAGAACGCCTTTCCGCTGATTTTGTCTTAGAG 1256 30 100.0 35 .............................. AAGAAACGATTTTGCAGGGAAAAGGGAAAGGTTGA 1191 30 100.0 35 .............................. TTTTAGCTGTTTATATTGCTTTATCAGCTATTATA 1126 30 100.0 35 .............................. ATTTCAAGTAAAGTATTTTGTAATTCTCCTTTTCT 1061 30 100.0 36 .............................. TTGAGTCCTTGCCATTGTTACATACCTCCATTTTAA 995 30 100.0 37 .............................. CAAGAAGCTCAGGCGTTGTCAAAAATAGAAAAAGAAA 928 30 100.0 37 .............................. GCCGGGAGATAACGGCGATTGAGGCCCAGGCCGAGCA 861 30 100.0 36 .............................. ATGTAATAAGTAAGGTAGTTTCTCTTCCTGGTGAGA 795 30 100.0 37 .............................. GATATAAGTCCTTTGAAAAATGTAGGTATATCTTTTA 728 30 100.0 36 .............................. AGAATACCTATCACTACCTACCACCTACCAGATTTC 662 30 100.0 35 .............................. TACGGTCAGCTTCTTCGTTCCCTAGTTCTCCGCGC 597 30 100.0 35 .............................. TTAGTATTGATTATCATTTTCAATGAAATTTCGTA 532 30 100.0 35 .............................. CTTTATCAACCTTAACATATCCTGCATTTTTAAGC 467 30 100.0 37 .............................. TCAGTGTAGAGCCTTATGGGCAAGCTGAAGTATGGGA 400 30 100.0 37 .............................. AGATTTCATTTTCTTGCTTCAATTGCTCTACTACCTG 333 30 100.0 38 .............................. CCGGTTCGCAGGACTTCTTGTTTTGTGGCTTCAATCCA 265 30 100.0 37 .............................. TCTTCTCCTGATTAATACCAGGAGACTTTTGCGCTTT 198 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 86 30 100.0 36 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : TGGGGCTAAAAATAGCCAGGGGTTTGGTATGCTGGAATGTATTTAGTATAGTATAAAGGGACATTTATCCTGGAAATCTGAATGGAAACGCAGGTGTTGCCAGGAAATACTGCTGGAAAATGCTCAAAAGATTTGATCCGCGTTATACCTGCACCAGAGCAATCTGGGAGGCCGATATTCACCACCGCACCCTTAAACGGTGGAAGAAGCGCCTGGAGAACGCGGAGGGGGACTTAAACGCTTTACGGGACCAGTCCCGTCGCCCTACCATATCATGTACAATTTTAGCCCAGAGGTAAAACAGGCGGTCATCAACTAGATAACAATGATATGTTTGGAGTGGGCTTTTTAAAGCTTCTGTCGTCGATAACCAGTAGTGTAAAAATCCCTGAGGATCGACAACAGGAGATTCTAAGAATGAGGCCTTTTTCTTGCCGAGTGGATTGAAGATGATATAATAGTGGGTGAGAAAAAGGTTAATATTTTCAACCACCTAACGG # Right flank : CGTTGAATAATATTTTCCTTTGAAAAGGTAACTATAAGTTTGATGTTGATTGTCAATAGAATTGACCCACTATGTGCAAATAAAATTGACCCACTGGGGAACAAAAATAATAAGCTGCAAGTCATGCGCCAAAGGGAATGAAGGTGTAGCCTCGCTGCCGATTTAACGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 941-179 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCDX01000035.1 Moorella thermoacetica strain ATCC 33924 MTAT_35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 940 30 100.0 37 .............................. AAAATAACAACTAAATATCGACTATATTTAAATGGAG 873 30 100.0 37 .............................. TTCTTCTACGATTTCCCACTTAACTTCGTCTGTTATA 806 30 100.0 36 .............................. TAATGATTCTCGTTACTCGGGTGCATCGCAGAATAA 740 30 100.0 37 .............................. TTTTTAAACCTACAGCCACTAAAGCAGTTAGGACATA 673 30 100.0 38 .............................. TAGCGCAAGATGAACGAATGATAGATAGGCAAATACGC 605 30 100.0 36 .............................. GAGTGGTGGAGAGAGCAAAAATGGCGACCAGATAAC 539 30 100.0 35 .............................. TGAAGCTGGTCATCGATTTTCCGCCCGAACTCAAG 474 30 100.0 35 .............................. TTTTTTTACTCCTTTTTTCTGCCTCTCACTTTCCT 409 30 100.0 36 .............................. CTTCAAGTAGTAATAGTATAAATAACGTTTTAAGTG 343 30 100.0 37 .............................. GTGGATGGGTAGTTTATTTATGTGGCGGGCATATTGG 276 30 100.0 38 .............................. TGTGTTTCTATACAACAACAGTTGGATGGTACTAATAC 208 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 100.0 37 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : CCTTGATGCGCTGCCATTTGTACATGCTGACCACCTCTTTTTCCTCCCCCTCTCAGGGGAGATTTTATCACAAGGTGGGTCAGTTTTATTTGACGATCCTGGGTCAATTCTATTTTACGATCTAC # Right flank : CATGAGAGAGGCCAAGAATTTCAAGCCCAAAAACAAAAGTTTGAAGCCTACCTAGTTCCCCCTGAAAAAGTCCACTTTTTGCATCACATAGGGGAAATGTCATTTCCGGACTGTAGATCGAGTAGAATTCTAACTGTTTCATCCATCTTGTTAAACCATTGTTGCCAACCGGTGTAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 41522-41294 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCDX01000016.1 Moorella thermoacetica strain ATCC 33924 MTAT_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 41521 30 100.0 36 .............................. TATGAGCACTCAGGATATCGTTGCGGCCAATGCTCT 41455 30 100.0 37 .............................. CAGCCCCCGCATGTCCACTCCTTCACGCCGGAGCAAG 41388 30 100.0 35 .............................. CAAAGAACCAACGAAAACGAAAAAGCCAAACATAT 41323 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 36 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : CGTTAAATCGGCAGCGAGGCTACACCTTCATTCCCTTTGGCGCATGACTTGCAGCTTATTATTTTTGTTCCCCAGTGGGTCAATTTTATTTGCACATAGTGGGTCAATTCTATTGACAATCAACACTCC # Right flank : TCACAAATCGTTTTTGCCTACCATTGAACGCGACTTGAAAGATAAAACACCGGAGGAACGCTATCAACTCCGCCAGGTGCGCAGCAAACCCGTGCTGGACGCCTTTTTGGCGTGGCTAAAAACCCAGAAATCCCGGGTGCTGCCCAAAAGCTCCTTTGGTCAGGCGATTAACTACTGCCTGGGCCAGTGGGATAAACTCACCGCCTTTTTACAGGATGGGCGTCTGGAACTCGATAATAACCGCAGCGAACGCTCCATCAAGCCTTTTGTCATCGGCCGCAAGAACTGGTTATTTGCCAACACCCCGCGGGGTGCTAAAGCCAGCGCCATTACCTACAGCATCATAGAAACAGCTAAGGAAAACGGGTTAAATCCCTTCCAGTACCTCATTTACCTCTTTGAAAGACTTCCCAACCTGGACCTCAAGGATAAAGATGCCCTGGATCAACTCCTGCCGTGGTCGGAAACTCTACCTCCTGTTTGCCGGATGAATAATTAAG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 26114-29585 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCDX01000018.1 Moorella thermoacetica strain ATCC 33924 MTAT_18, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 26114 29 100.0 35 ............................. GCGGCTCCAGGCAGGTGACCGGGTGGTAGTGATGG 26178 29 100.0 37 ............................. TTGATCATTTCGTTGAGGTCACCAAAATGGTCCGCAA 26244 29 100.0 35 ............................. CCGAAATCGGTAGCCACTTCCACGCAGCCCTGACA 26308 29 100.0 37 ............................. TTTTGCCTGCCGTCTTTGCGTATTCCGCTGCTACCTG 26374 29 100.0 37 ............................. TACTCTTGCCTGATGTACTCCCATCCGGCTCGGAGCC 26440 29 100.0 35 ............................. AAGATACAGCATAATAGCCTTTCTCGTTCTTGTGG 26504 29 100.0 37 ............................. GAAAACTTCCAGGGCTGCGACTTCGCCGCCGATAAAG 26570 29 100.0 36 ............................. ATATATAATGCGCTTCTACAGCGCTGTAAATCTGCT 26635 29 100.0 35 ............................. ACCTACTTCAACGAGCAGCTTCACTGGCAGGAGCG 26699 29 100.0 35 ............................. TTGCCGTTTTCCTTATAAAGTTGCGATTGCCGCCA 26763 29 100.0 36 ............................. ATGCAGTACAGGAAGAGCTAATTAAAACTCTAGGAC 26828 29 100.0 35 ............................. GATGTAAGAGGAAGCTTACCAATCCGCATTCTATC 26892 29 100.0 36 ............................. CGCTGGAGAGGAGGTAGCTTAGTTGCTAACGACCTA 26957 29 100.0 38 ............................. TGAGGACCATATAGGCGGCCTTGATACCGTAATTAAGA 27024 29 100.0 36 ............................. TAGTTATCTACCCCTACATGGTAAATCCTATTACAT 27089 29 100.0 34 ............................. TATATTAAGTACCGATTGCCTGCCGCATCTGCTA 27152 29 100.0 36 ............................. TATATTAAGTACCGATTGCCTGCCGCATCTGCTACT 27217 29 100.0 35 ............................. CTGCGGCAATTTCTCTTGTATCGTACCAGTGACTT 27281 29 100.0 36 ............................. GGTCTATCACTTGACAGCTAGCGCTCATTGTGGTAC 27346 29 100.0 36 ............................. CAAGCGCAGCTCTACCTTGTTCATGTCCAGCGGCAG 27411 29 100.0 36 ............................. TCGATCTGCGGGACGCCCTGGGCGAGGATGGAGCTG 27476 29 100.0 37 ............................. TATTCAAAAGACCCAGTGTCAATGCAAACACCATAGA 27542 29 100.0 36 ............................. GAGCTAGACGCCTTAAGGCAGAAAAACGTGATTTGG 27607 29 100.0 36 ............................. TCATCGCAAATAACCCCGTCGCGGCAGCGTAAAGCA 27672 29 100.0 36 ............................. CCAATATGGCAGGGGCCTTGGTGTCCCGCAAAATCT 27737 29 100.0 37 ............................. TAGGACTGTATAATCAGTTTGCTGCAATACCCTGGGG 27803 29 100.0 37 ............................. CAGGGCGATAAGCCCCGTGGAAACGCAGAGTATCAGG 27869 29 100.0 36 ............................. ATAACCCCAGGGGCGACGTTATTATGCCGGTAAGTC 27934 29 100.0 35 ............................. AAACTTAGGCCCCATGCCGGGGGCCGTAAATTGTC 27998 29 100.0 36 ............................. AAGTTAATGGAGGTGAGCTAAATGGCTGACGGACGC 28063 29 100.0 36 ............................. TGAGATGCGAGGCGCCGAAGGAATCAGTCTATGAAA 28128 29 100.0 36 ............................. TGAGTATCTTTTAAAACTTTTAATTGGCTTGTTTAA 28193 29 100.0 36 ............................. GCTAAAATTGAACAGGTTAACGGCGGTGGTAAATAA 28258 29 100.0 36 ............................. CGGGATGGCCTGCCGGCAAGATCGTGCCGGGCTTAC 28323 29 100.0 36 ............................. GAGCTCTGACAGCCCGGTCAATGCCTTCGGCACCTA 28388 29 100.0 36 ............................. GGCCCCAGGTGGTTTACAATCAACCTGTTAATTATA 28453 29 100.0 34 ............................. TTTTGTAGCTGTCTGGATGCTTTTTAGAGATGCA 28516 29 100.0 37 ............................. TTGCAGGGTCCCCTTGCTGTCCAAAGCTACTACATAA 28582 29 100.0 35 ............................. CGAGCTAATCTACTCCGACCCTACCTTTCCGGCCT 28646 29 100.0 36 ............................. AGACATCCGGCTTCTGTACTTGCTGGCTTATCCTCG 28711 29 100.0 36 ............................. CGTCATAGCTACTAACCCGGCTGATAAAGCCATTGA 28776 29 100.0 36 ............................. TTATTGGTATTCTATGCAACATGCCATACCGCGAAT 28841 29 100.0 37 ............................. TTAGCCCCTTTGTAGTTATCAAGGATTTCTATGCAGC 28907 29 100.0 38 ............................. TAAATCCTATTGCAAATCCTATCTTCTCCGGCAGCTGA 28974 29 100.0 36 ............................. TAACGTCTGTGAGACGTGCTTCCCACTTGATATAGA 29039 29 100.0 36 ............................. GGGGCAATTGGGAATGTGGCAGCCCACACGCTAACC 29104 29 100.0 36 ............................. TAGTGTCCTGTTTAGCATAAACCTTAAGGGGTAATA 29169 29 100.0 35 ............................. AAACAATGTCGCTCATGCCCATTACGGCATGTTTA 29233 29 100.0 36 ............................. GAGTTAAAGAGTGTTCGCTCGGGCATTGAACGCCGG 29298 29 100.0 36 ............................. TGAGGGTTAAAATTTTAACCAGCATTGCATCGGCGA 29363 29 100.0 35 ............................. CTGCGAGGCGCGACCTAGCTGCTGCTGCTCCAGGC 29427 29 100.0 36 ............................. CTGGTACGACAGCCGGGAAGTTGCCGTAGTGGGGCG 29492 29 100.0 36 ............................. ATCGAGGAGTTAAATTCGCGAACTACTATGTACTCC 29557 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 54 29 100.0 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : CTGGAAAAGACAATTTTGCACCGCAAGCTAAAAAGGAATATTCGCTATAAAAGTCTTGTCCGGTTAGACTTATATAAGCTTATAAAGCACCTCCTTGGTGAAGAAAAATATTCCCCCATGAAGGTGTGGTGGTAAATATAAGAGTGATCCTGATCTATGATATTAATACTGAAGACAACGACGGCAAACGGCGCCTGGTAAAGATCATGAAGACCAGCCGTAAATATTTATCTCATGTGCAAAAATCCGTTTTTGAAGGAGATATTACCGAAGGGCAAATATCCTTACTTAAGAAGGAAATAATGGCCATAGTTAACATGAAAAAAGACTTTGTCATCATTTATAGCCTCAGGGATGGAGTAAAGCTAAACCGTGAAATCTTGACTGACACCCCCGACCCTACAGATAATTTCCTATAGTGTAAGTGCAAACTGGCGGTTTGACGCAGGGGCTTTTAAAAAATTGCTAAAATCCCTGTCGGGACAAGCCTTTCATCTGCG # Right flank : TGCTGCCGGCGAGTTCCAGGGGTGTAGATCGTAAAATAGAATTGACCCAGGATCGTCAAATAAAACTGACCCACCTTGTGATAAAATCTCCCCTGAGAGGGGGAGGAAAAAGAGGTGGTCAGCATGTACAAATGGCAGCGCATCAAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 148-2060 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCDX01000009.1 Moorella thermoacetica strain ATCC 33924 MTAT_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 148 29 100.0 36 ............................. TTTCTTATTTCCGCACTCCGGGCAAACCGCCCCGTA 213 29 100.0 35 ............................. GATAATCTACCAAGTACTGTTCCCCGCCGTCAGTA 277 29 100.0 36 ............................. TCTACGCCATGCCAGTCTATAAGAATGACAAGTTTG 342 29 100.0 36 ............................. AACAAAAAAGCCGCGACCCCTATACGGGATCGCGGC 407 29 100.0 34 ............................. CAGGAACGGGCTAAGGTACTCATTGAGAAGGGCG 470 29 100.0 37 ............................. TATGGCCGGCCAGGGAACCAATGTCCAGGTGAGCCAG 536 29 100.0 37 ............................. TCCAGTAGGTAGGCCCGTATCCGCATCGGCTGCATAT 602 29 100.0 35 ............................. CCGCAACCGCGTGGGCAAGGAGTGCGCCGATATAA 666 29 100.0 37 ............................. CCAGCGAGAAAGCAGGAAAACTCAGTTTTACAAGCCA 732 29 100.0 34 ............................. CCCTGCGGCAGCCGCCACGGAAAGCCTCAAGTGC 795 29 100.0 36 ............................. TCATAACCCCGCAGGATATTGCGAGGGTCAAAAGCG 860 29 100.0 34 ............................. TGCCCGGCCGGGGTGGACTGCTGAGAGGGGAGAA 923 29 100.0 37 ............................. ATCCGGTTCTTCAGGAAGACAACGAATACTCCAGGAT 989 29 100.0 35 ............................. TCAGGGCAAACTACAGGGTGATAGCAGATGAAATT 1053 29 100.0 36 ............................. TGATACTATCTTAGGTTATCGGTCTACACCATCCGG 1118 29 100.0 36 ............................. ACCGGAAATAACGCCATCTTACGGGGAGCCAGCCCA 1183 29 100.0 36 ............................. TATTTATGAACATATAAAGTTTGTGCTATAGGGTCA 1248 29 100.0 36 ............................. AATTATCATGTATAAAAATCCCCTCCGGCATAAACC 1313 29 100.0 34 ............................. TAAGCCGATATAAATGCATCCGGGCATAAGCGGT 1376 29 100.0 35 ............................. TTATCCCCGGTCCGGGAAAGTACAATTTTAAAGCT 1440 29 100.0 35 ............................. TCGGGTTGAGACCTCAAATCTATAGGAGGACCCAA 1504 29 100.0 35 ............................. TATGGTGTAGGTCATTTTTGTTGCCTCCTTTTTGT 1568 29 100.0 37 ............................. AGGATTTCAGCGAAGCATTGCGGGCGCTGACGACATC 1634 29 100.0 38 ............................. GGGCCTGCCGGGCCGCCTTCGCGTCTTCCAGGGCCTGC 1701 29 100.0 39 ............................. GACCGGCGTAGTTGGCCTGACTTGGTGGGGCTCTTGCAG 1769 29 100.0 37 ............................. TGCACCGCCCGCTTCTACGGTTGAAAAGCCTTCTGGT 1835 29 100.0 36 ............................. CTGAAGCAATCCCAGGTCCTCATCGGCAAAAACTGG 1900 29 96.6 37 ........T.................... TACCGGGGGCCTTGCTGCGCATAAAAGTCCAACTACG 1966 29 100.0 37 ............................. GGCAGTTGATCAAAACTATCCACGGCCACCTGGCAGA 2032 29 96.6 0 ....T........................ | ========== ====== ====== ====== ============================= ======================================= ================== 30 29 99.8 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : ACCGTTAAATCGGCAGCGAGGCTACACCTTCATTCCCTTTGGCGCATGACTTGCAGCTTATTATTTTTGTTCCCCAGTGGGTCAATTTTATTTGCACATAGTGGGTCAATTCTATTGACAATCAACACAGGGGGGCCTTGACTAGCCG # Right flank : CAGGGTGGAGATAAAAATCTGGTGATAACGTCAAAGGTGGAGTAGTAATCGGGCTGGGTACCCGGTTGCAAGTTTTTCAGCAAGAAATGGTGCGACGTATAACTGGTGATAGCGATATAGACTTAACGTTACCAGGTAAGGGAAAGTGTGCTTACTTCATCATCACTCCAGATACCCATGGCGCCTTTGATTTTCTGGCTTCATTGCTGTTCACCTTTTTATTCGTTCGGTTGGTAGAGGTTGCTGATACCTCTCCCAATGGCCGTTTACCGGTGCAGGTTAGATTTCTTCTGGATGAGTTCGCCAATATCGTAAGTATTCCGGAGTTTGAAAAGAAAATCGCCACCGTCCAGAGCCTAAGACTGAAGACGAACTTAACGATGGCGGAAATCAGGATTACCATGATACTAAGGACCAGAAACCTCTAGAAGAAGGGGCAGAAGAGGTGACGGAAGAAAATATAAAAGAGGGAGATAGGGTTATAGAGATAGAAAACAAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //