Array 1 182329-181020 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNGH01000004.1 Enterococcus faecalis strain 8714 NODE_4_length_253099_cov_65.4506, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 182328 37 97.3 29 ....................................C ACCTTTTGGCGTTGCATTGGGACGTCTCC 182262 37 100.0 29 ..................................... ACAACGCACGAGAGCGTGTAAAAGACTTA 182196 37 97.3 29 ....................................C AGGTGAAATATCATAGTTTACCTTCCTGT 182130 37 100.0 29 ..................................... TCTTAATCTTCATCGCTTTCACCTAATGT 182064 37 100.0 29 ..................................... CGATATAAGCATTTTGTATCGTCCAATGT 181998 37 100.0 29 ..................................... CTTTACCTTCTGTGAAAAATGGTTCCTGT 181932 37 97.3 29 ....................................G AACAACGTATAAGTTCGTATGTAGGGCTT 181866 37 100.0 29 ..................................... GCGAATCTTTGGCATTCTATCACGAAGCT 181800 37 97.3 29 ....................................A GTTAGAGCCGCTTAGATTCTTAGAGAAGC 181734 37 97.3 29 ....................................A CGTGCAACATTATACGCTGCCGACTTATT 181668 37 97.3 29 ....................................G ACATGGTAGCGATGAACGATTGCAACAGA 181602 37 100.0 29 ..................................... AATACAACTTTCTCACCATCACGATAGTT 181536 37 97.3 29 ....................................A TCTTCACCATTGAAAGCACCTTCTTTGTA 181470 37 97.3 29 ....................................A AATGAAGTCAGAACGTGAACGACTTGAAA 181404 37 100.0 29 ..................................... TTTACAATATGAACAACGAATTAACCTAT 181338 37 100.0 29 ..................................... CGTAAAAATTTATATCGCATTGAAAATAG 181272 37 100.0 29 ..................................... TGCGGTATTATTCGTAGGTTTGCTTTTTT 181206 35 81.1 114 ......................TT.--.CG......G ATATGAATGATGTAAAAATATCGTTAATATGTATAAATGTGATTGTTATATAAAAAATATAAGTAATAAATTGAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTA T [181174] 181056 37 67.6 0 A...........C...A....TT.CTT...G..T.GA | ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 19 37 96.2 34 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTAACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : GAATACGATTATCTATAAATCAAGAACTAATCCCCAATTTATTGAAAATGATACTCCCTGTTTTATTAATATTTCATGCTTTTGTTGTACTATTTGATGATACAAAAAAGTAAAACTGAGGACCCAATTAAAGTCAAGTTAACCACATTGAAAGATAAACCTTTCAATGTGGTTAAAGATGCTTAATGAGATTCATGAAACATAGAAAGCGGATTAATTTTCTATGCTCTTTATTTGTATATTTTCTTGGGAATCATTATTGATTGTGGATTAAAAAGATAATCCGCTCCCCGTTTCACCACAGGCATATTCGTAATAGCTAAAATGAAGAGGGCTAAGAAGAAAAGTGCCAGGATTCGGAAAGTAAACCATTCTTTAAAGAGTGTGTCTAATTGTAAACCACTTTCCAACAGAATAATTAAGGGCATATGCAAGAGATAAGGGTAAAGGGTATCTTTTCCTAGGGCGCTTAAAGGTAACTTTCGTTTCGGCAATAATGC # Questionable array : NO Score: 5.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.38, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 53830-54130 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNGH01000005.1 Enterococcus faecalis strain 8714 NODE_5_length_247631_cov_59.0814, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 53830 37 100.0 29 ..................................... AATTGTTTATTGAAATCATTTCAGTATAT 53896 37 97.3 29 ....................................C CCACCATCAGCAAACATTTGCAAATTCAT 53962 37 97.3 29 ....................................T TCAATTATTAAACAATTTTCCATTAGAAA 54028 37 97.3 29 ....................G................ ATGGCCGTCACACCAATGCTGCACGATTA 54094 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ============================= ================== 5 37 97.8 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACG # Left flank : CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACATTACAAGAAACCTGGGCAATGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATACTTCTCCGAG # Right flank : AAACTTTTTTGATTTGGCTTTTTCTCCCTTGTTTTATAGTCATGTTGTTTAAAAACAAACTATCACCTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTTGGAAGCTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA # Questionable array : NO Score: 5.46 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //