Array 1 49939-44929 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCPN02000006.1 Acinetobacter baumannii strain WM98c, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 49938 28 92.9 32 ............CC.............. AGTAAAAATGACTGATAAGCCAATTACAAAAG 49878 28 92.9 32 ............CC.............. ATCATTTTCTTTTGTATTTGCTCATTCTGTGT 49818 28 92.9 32 ............CC.............. TGAGCCAACAAAGGTAAAGGTCACATGCGTCT 49758 28 92.9 32 ............CC.............. AGTTCCAACAACAACTATTCTTTGAGCAGTTC 49698 28 92.9 32 ............CC.............. GCCAAAGCTCGCAAAGCATCCGCACCGCTAAT 49638 28 92.9 32 ............CC.............. TTCCTTCGGCTCAAAAGGCTTCGGCAGTTCAA 49578 28 92.9 32 ............CC.............. TATAACAATAGTGGTGGTCACATGGGTCGTTA 49518 28 92.9 32 ............CC.............. AGAAGAATTCACCATGACATTACGCGACTACC 49458 28 92.9 32 ............CC.............. ACTAAACTCTGGTGTTTTATGGGCACATGTTT 49398 28 92.9 32 ............CC.............. GACTAAGGCACCCGAAGAATCAAAAAGGTTAA 49338 28 92.9 32 ............CC.............. AAAATTAACAATTACATGGATATAAACAGTTT 49278 28 92.9 32 ............CC.............. ATCCTCGCCTACTTTCCCAAACTCATAAGGCA 49218 28 92.9 32 ............CC.............. AATCAAAAGGCTCTGTAACTATTCGTGGTTTA 49158 28 92.9 32 ............CC.............. ATCTGAATAAAGCAAATCACCTGTATTTGAGC 49098 28 92.9 32 ............CC.............. ATCCACTCTTTTTCCTCAGTCTTGGCTTTATT 49038 28 92.9 32 ............CC.............. ACTACCAATCGAAGAAAAGGACCGCCGGTTCT 48978 28 92.9 32 ............CC.............. ACAGTACGCCGTCACTCACATCGGATGGCTCA 48918 28 100.0 32 ............................ TGCCACATGATTGGTGTACCCAATTTGGATGA 48858 28 100.0 32 ............................ TACCGCACGAAGTAATGCCGGTTAATAACATC 48798 28 100.0 32 ............................ AGCATGGTTACCTGCGGATCAAGAAGCTACTC 48738 28 100.0 32 ............................ AATAGCTTCATAGGTAAAGGTTTATCATGTTT 48678 28 100.0 32 ............................ TGTTTATCTCAATCGTTGTATTGATGATGATG 48618 28 100.0 32 ............................ CATCACACACGATTTCACTATGAACAGTTACA 48558 28 100.0 32 ............................ TTTAACGGGAATGATCGGCTTAGGCGTATACC 48498 28 100.0 32 ............................ GAATGTTGGATGGGTCGTAGATGGAGCTAAAA 48438 28 100.0 32 ............................ TTATTAAACATTATTTCTTTTATAGCTTTAGC 48378 28 100.0 32 ............................ TACAAAAGCATGTAGGTCTTACTGATAGAATG 48318 28 100.0 32 ............................ TATTGGTGAATTGACATCACTGCCTACAGCTC 48258 28 100.0 32 ............................ AAGGCAAAGACACATGCATAACGACTGCAACC 48198 28 100.0 32 ............................ TGAAAAATCCAATCTACCAGAAGGCGCAATTA 48138 28 100.0 32 ............................ GTAAAACCCACGCATTTTCCCGATTAGGCGAA 48078 28 100.0 32 ............................ AAGAAAATAAGAGCGAGCGCGACCAGGAACTA 48018 28 100.0 32 ............................ TTTCTGAAGCTTACCAATACTATAAATTGCGT 47958 28 92.9 32 ............CC.............. TTACTTGCGGTGGCCTCAACTACAGCTGCTCA 47898 28 92.9 32 ...CT....................... TGTATCATTTCACGTTCAGGAATATACTCAAT 47838 28 92.9 32 ............CC.............. TATACTGGTCGTATTACGGATTTCCGAAGACC 47778 28 89.3 32 ...CG........C.............. ATTAAAGCATTTTCATATGAGCCTTCCTCATT 47718 28 82.1 34 ...CA......TCC.............. TTCGGATCAGTCCAGTCATCACATCCTCGTCAAT 47656 28 89.3 32 T...T.......G............... TATCATTGCACGACAGAACGCATCAATTAATG 47596 28 89.3 32 ...G........CC.............. TACATCGCTTAAGATCGCCAAAAGTGCAGCAC 47536 28 85.7 32 ...CG.......CC.............. GAGAGTTTGGCTTGTACATACTTGGTGAAATC 47476 28 85.7 32 ...CG.......CC.............. TGCAAAAGTTCCTGTTGGTCACGGCATTCATT 47416 28 85.7 32 ...CG.......CC.............. GTTACTGTACCCTTTGAATTTGCAGGCATCTT 47356 28 85.7 32 ...CG.......CC.............. TGACTGTACTTACTGTTAGGGTTGTATACATC 47296 28 85.7 32 ...CG.......CC.............. TTCAAACAATTGATCATCGTTTTCTACACGAA 47236 28 85.7 32 ...CG.......CC.............. GTGGTATGAAAAGCAGCTAGCCACACTTGATG 47176 28 85.7 32 ...CG.......CC.............. AGCCGCACTTGCATAATTTCTATATGCTTGAG 47116 28 85.7 32 ...CG.......CC.............. TGCTCGCACGACCAGCACGAAGAAAGAAACGA 47056 28 85.7 32 ...CG.......CC.............. TTTTTCATCGATCATTAAACGTTTAACTGTGA 46996 28 85.7 32 ...CG.......CC.............. TGTTCCTGATAAACATGTGATTGCTTTTAAGA 46936 28 82.1 32 ...CG....T..CC.............. TATTTGAATTAATTAAGTTTCAACGTTCTAAC 46876 28 89.3 32 ...G.......TG............... ATTAATAAGATGGGGGTAAAGACATCCGATAC 46816 28 89.3 32 ...G.......TG............... TTGATGTGTGTCTTGGTGCTCATCCTGTTATC 46756 28 100.0 32 ............................ AACATTGAAAATAAAGGCTTTGAGAGACTTCA 46696 28 100.0 32 ............................ TAACTTTTGGGAAACTTGCAGCCCACCTTTTT 46636 28 100.0 32 ............................ TAGGTGATAGATGAGAAGTTCAGGCTTTTCTG 46576 28 100.0 32 ............................ TAGGTGATAGATGAGAAGTTCAGGCTTTTCTG 46516 28 100.0 32 ............................ CTAATATGGATTTGTGGGATTCAGTCTTCATG 46456 28 100.0 32 ............................ AATGGGGCAGAAAGAGCTAAGACGTTTATAGA 46396 28 100.0 32 ............................ TAGGTGATAGATGAGAAGTTCAGGCTTTTCTG 46336 28 100.0 32 ............................ TGAGCATCAAAAGTGCAGTTTCCTGAATTGTC 46276 28 100.0 32 ............................ TGCATCAAGTGCCTTGGTCACAATGCCCTGCT 46216 28 100.0 32 ............................ ATAAGCGCTTGATGTCGGGTTTTGAGCTGTAT 46156 28 100.0 32 ............................ AAATCCAAAGACTCCACCAGACGCTTGAGGTC 46096 28 100.0 32 ............................ AGTTCCAAAATCTTTAAGTGGCTTTCTTTTTC 46036 28 100.0 32 ............................ AGTAACAATAAAGAAAGCCGTTAACATGCCGA 45976 28 100.0 32 ............................ ATGTTGTAGATGGGAAATCGGCAACAGTCAGC 45916 28 100.0 32 ............................ ATTCTGATCAATAAAAATCTCCAGCCCATAAA 45856 28 100.0 32 ............................ ACTTGCGACTTGGTGAACATGTTCCCGATACC 45796 28 100.0 32 ............................ TATTACGGTCTAAATTATAAATTTGTGCGACA 45736 28 100.0 32 ............................ TGTATGAAGAGATTGCGCTGTTGTATCTTCAA 45676 28 100.0 32 ............................ GGTCTTGGAATGCGACAATATTGTCATTAATC 45616 28 100.0 32 ............................ TCTTCAATCGCATGAGCAATAAACACTACATC 45556 28 100.0 32 ............................ TGGATTCTTTGCATAAAAGGCCACGCGTTTAA 45496 28 100.0 32 ............................ TTTACCAGCCTCACCAACAAATTTAATGATTT 45436 28 100.0 32 ............................ GTTCTGATATGTATGTGGGTTCTAATACTCGT 45376 28 89.3 32 ...G........CC.............. ACACGAAAAGCGTGGGAAGCTTTCACCGAGTC 45316 28 89.3 32 ...G......A.G............... ATTCGTAAAGCTCGTAGAAATCAACTTCAACC 45256 28 89.3 32 ...G........CC.............. TTATCTGCCATACCCGACTGCTTTGTTCCTAA 45196 28 96.4 32 ...G........................ ATTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 45136 28 92.9 32 ...G.......T................ ACCAGACTTTTGCACTGTTGTATGAGGAGTAG 45076 28 100.0 32 ............................ TCTTTAGTCTCAATAAATGAAATGCTCAACTC 45016 28 100.0 32 ............................ ACTGAACTGTTCATTAACTTCACGAATGTCAT 44956 28 85.7 0 ...CT...................AT.. | ========== ====== ====== ====== ============================ ================================== ================== 84 28 94.9 32 GTTACTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACATTATACAAGCAACTCGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAGAACTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTGAAAGATGCTTTTGTTATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAGTACCTCATAACGAAGTATTTCCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 55029-55596 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCPN02000006.1 Acinetobacter baumannii strain WM98c, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 55029 28 100.0 32 ............................ ACTTAAAACATCATTCTTAATATCCCAGTCAA 55089 28 100.0 32 ............................ ATTATCATAAGCGCGACCAATTGCAAGCGTAC 55149 28 100.0 32 ............................ GACAAGCTACAGGTGGAGGTACATCCAAAGTA 55209 28 100.0 32 ............................ AAGGTCAAGACTACTTGTTCCGTATCCATGAA 55269 28 100.0 32 ............................ AAACATGTCATCAAGTCCACCACCATCAAAAC 55329 28 100.0 32 ............................ CACCCCCTGCTAAATTTGTTACTAAACCGTAT 55389 28 100.0 32 ............................ TTTGGCAACCCCAAGTGCCGTAAATCCTGATT 55449 28 100.0 32 ............................ ACATCCGAGAAATGGCTTACCGGGTGCAGTCA 55509 28 100.0 32 ............................ TCCAACTGATCCACCTGATCAACCACCACCAG 55569 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGATATAAGGTAAATCAAGTGCTTGTTGTTTACTTAAACGGATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACATATTATTTGAAAAATGAAAGTGTTGAAGGTGAGAGTTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTAGAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : ATGCCTGGTTGATTGTTAGTTTGACCGTGTATTGTTGTTCATCGCATAGATGATTTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCTGGTTGATTGTTAGTTTGACCGTGTATTGTTGTTCATCGCATAGATGATTTAGAAATGTCTAATACAGTTATTGTATCTCCATCAGTAGTTGTTCATCGCATAGATGATTTAGAAAAACGACCAACCGATTGTTGCCGTAGTCGTCATGTTGTTCATCGCATAGATGATTTAGAAACGACACGCTCACAGCTCACACCTAAATTATCAGTTGTTCATCGCATAGATGATTTAGAAAAATGTTTATTCATACTCATGTTAGGCGTTTAAGTTGTTCATCGCATAGATGATTTAGAAATTGAGCATCAATTAAACCATCAACACAACCAGGTTGTTCATCGCATAGATGATTTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 55771-57776 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCPN02000006.1 Acinetobacter baumannii strain WM98c, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 55771 28 100.0 32 ............................ TGTCTAATACAGTTATTGTATCTCCATCAGTA 55831 28 100.0 32 ............................ AACGACCAACCGATTGTTGCCGTAGTCGTCAT 55891 28 100.0 32 ............................ CGACACGCTCACAGCTCACACCTAAATTATCA 55951 28 100.0 32 ............................ AATGTTTATTCATACTCATGTTAGGCGTTTAA 56011 28 100.0 32 ............................ TTGAGCATCAATTAAACCATCAACACAACCAG 56071 28 100.0 32 ............................ CAATCAGTTTGATATGAACCGTTACCGTCCGA 56131 28 100.0 32 ............................ GATGATTGAATAACAAAATCGGTTGCCGATCT 56191 28 100.0 32 ............................ TAAAGATTTCCCCTTCCTTTGCTGCCAATGTT 56251 28 100.0 32 ............................ AACTTAAGAAGATCGTTGGGAAGGGAGGTGCA 56311 28 100.0 32 ............................ ATGCTGACAAATGCAAATGAGTTGAATGAGTT 56371 28 100.0 32 ............................ TTTAGGCAGGTAGAACAAAACACAGATAGAAG 56431 28 100.0 32 ............................ AATGTAAAGAAAATCGAAAATGACCGTGTGAT 56491 28 100.0 32 ............................ AATTAGCGAATGGCCTCCTATTTGGCGTCAAT 56551 28 100.0 32 ............................ ATTAAAGAAGCCCAAGAACAACGTATTAAACG 56611 28 100.0 32 ............................ AATAAACACCGTTCCATCTGTACCAGGTATTT 56671 28 100.0 32 ............................ ACATGGTCTGCCCACCACTGCATCATATTGCG 56731 28 100.0 32 ............................ TAGATGTTCAGTGATGGCCAAGTCAAAAGGTT 56791 28 100.0 32 ............................ TAAAGACCACATAGCAAAAACTAGCCCTATTC 56851 28 100.0 32 ............................ TAACAAAGATGAAGCCCGAACAAATCTAGAAG 56911 28 100.0 32 ............................ AATCAGGAAGCTCCAAACATTCGACAAGCTGC 56971 28 96.4 32 ...........T................ AGCACCAGTATCTATAACTTATGCAAAAGTTG 57031 28 100.0 32 ............................ ACAATATAAATGCGCCACATTCTGACGTTTGG 57091 28 100.0 32 ............................ AAAGCCTTCAATTCCTAAACACCATTTGCGGA 57151 28 100.0 32 ............................ ATATTCCTAATGGCGGATCTAGAAACGTTATT 57211 28 100.0 32 ............................ ACGTCTTCTAATGGTGGACTCTAGTCCGATAT 57271 28 89.3 32 ....C......TG............... TGTCGCATCTCGCGCAGGGCTATGTTGTAAAT 57331 28 89.3 32 ...A...............G.....C.. CATATAGCACCAGTATTAATGTCTAGTTTACG 57391 28 89.3 32 ...A........CC.............. TTCTTGGGATGTGGAACTGTTACCAGCCCCTT 57451 28 92.9 32 ....C.......C............... ATATTCATGAGCGTATTCTGCTGCCGTAATAA 57511 28 100.0 32 ............................ TGTCACCTTCGCCAAAATCTCAACTGGTAATT 57571 28 100.0 32 ............................ TCTAATGTATCGCCTGCGCTAAAATATCCTGG 57631 28 96.4 32 ...A........................ TCGATCCGGATGGCTTTATCCCGAGCCGCATC 57691 28 92.9 31 ...A.......T................ ATAGCTTCTGGTCCCCGAAAATATCAACTAT 57750 27 85.7 0 ...T........TC..........-... | ========== ====== ====== ====== ============================ ================================ ================== 34 28 98.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TGTTCATCGCATAGATGATTTAGAAAAAACATGTCATCAAGTCCACCACCATCAAAACGTTGTTCATCGCATAGATGATTTAGAAACACCCCCTGCTAAATTTGTTACTAAACCGTATGTTGTTCATCGCATAGATGATTTAGAAATTTGGCAACCCCAAGTGCCGTAAATCCTGATTGTTGTTCATCGCATAGATGATTTAGAAAACATCCGAGAAATGGCTTACCGGGTGCAGTCAGTTGTTCATCGCATAGATGATTTAGAAATCCAACTGATCCACCTGATCAACCACCACCAGGTTGTTCATCGCATAGATGATTTAGAAATGCCTGGTTGATTGTTAGTTTGACCGTGTATTGTTGTTCATCGCATAGATGATTTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCTGGTTGATTGTTAGTTTGACCGTGTATT # Right flank : AGAGTTCCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGCTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATAACATTTAAACTTTAACAATAAATTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCAGTAGCCGCTTACATTAATTTTGGTGTGCGAAGAATGAAGCTTGCATGGGTGGTAGGAGCAAAACATAAATTTGCACACGATGGTGCATATCCAGTTGCATCGACCAAAAAACAACAAAAACTACTAATGCTAGATGAATGGGTCAAAGTAAGTAGCTTATTGGCAGGTGCAGCAGGGGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //