Array 1 5221254-5220892 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM000739.1 Bacillus cereus AH1271 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 5221253 30 100.0 37 .............................. TGTATAGCGACAGATAATTCATTCGTCTCAGTATTTC 5221186 30 100.0 37 .............................. TGTATAGCGACAGATAATTCATTCGTCTCAGTATTTC 5221119 30 100.0 34 .............................. ATGTATTGTTTTTATAAGGCGATAAGAGAAACTG 5221055 30 100.0 37 .............................. TATTACCCACAATATATTTTGCTCCTTTCTATTCCTT 5220988 30 96.7 37 .........A.................... TGGGGAGACGCTCGGCACTTCACAAAATCATTGCGAA 5220921 30 73.3 0 ...T.....AC..G......A...A.G.G. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 95.0 37 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : TGAAATTGATCCACCTCTACAATGTGATAACGGCCATTATCCGTTAAAACATAACAATAGATGTATTGAAATTTAAGTCATTATATGACACCGTATGCTATGTGGATTGTTAAAACAGAACAATAGATGTATTGAAATCAAACAAGATTACAACTATTGAACAATGTCGTCAATCGTTAAAACAGAACAATAGATGTATTTAAAAAGATAACAAATCATTAAGAAACCCTGGTTGCAAGAGTGTAAATTATTAAATTTTTGGTGAATTTCCACGCCATAAATGGAGAAGTAATACAAGGTGAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAAAAAACATTGATACATAAGCATTTTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGAATATTGTTGATATACAAGGGGTCATCGCAAAATTCATTGTTAATCATCCATATATTATTGGG # Right flank : CTCATTGAACTTTGATTCGATTTGTATATAAATAGAGTAAATGTTATTATATAAGTAATCCAATACTGAAAAAATCATATTGCAAAAGGACACACCTACGCATAACCATAGCGTAGGTGTGTCCTTTTTTTGTTTAAGGAGGAAAAAGTTATGGGGAAAACATTATTTATTGCAGAAAAATCAAAAGTGGCCAATGAAATTATGAAATCGCCACGATTCCGTCACTCACAAAAGTACATTGGTAGCAAGCCTTATTATGGTTATTATGAAAATGATCATTATATTGTCAGTTGGTGCCGTGGACATTTGCTGGAACTAAAAAATCCGGAAGAGATGGATCCAGAGTATAAAATGTTTAAGTTAGAACATTTACCTTTAATTTATCAGCCAGCTTATAAAGTGATACAAGAAAATGCTGAACAATTACAAATCCTTGTTAAACTACTGCAACGTCCTGATGTTGACCATGCGGTGAACGTATGTGACGCGGACCGAGAGGG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:0, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 5221778-5221549 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM000739.1 Bacillus cereus AH1271 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 5221777 30 100.0 36 .............................. TGATCCACCTCTACAATGTGATAACGGCCATTATCC 5221711 30 100.0 36 .............................. TTAAGTCATTATATGACACCGTATGCTATGTGGATT 5221645 30 96.7 37 .........G.................... CAAACAAGATTACAACTATTGAACAATGTCGTCAATC 5221578 30 90.0 0 .........G...............T...A | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 96.7 37 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : CCTATACAAGTCAACGATGTAGTGAATGTGGGTATATCCATAAAAATAATCGGCAAAATCAATCTACCTTTGAATGTCAGCAATGTAGTTTTAAAGTTCATGCAGACTACAATGCTGCCAAAAACATTTCTGTGTACAATATTGAGAAGGTAATACAAAAACAATTGAAGTTACAAGAAAAATTAAATTTAACAAAATATAAAGAACAGTATATAGAGCAGATGGAAAATATTAATTAAATAAGGTAGTAGGTAGTAGTTTGGCGGATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAGGTGTATACGCTCCATAAGGTAGTATCGAATGTTAAAAAACATTGATACATAGGCATCTTGAATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGGATGTTGTTGATATACAAGGGATTGTCACAATATTCGTTATTAATCATCTATCTATTATCGGG # Right flank : AGATAACAAATCATTAAGAAACCCTGGTTGCAAGAGTGTAAATTATTAAATTTTTGGTGAATTTCCACGCCATAAATGGAGAAGTAATACAAGGTGAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAAAAAACATTGATACATAAGCATTTTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGAATATTGTTGATATACAAGGGGTCATCGCAAAATTCATTGTTAATCATCCATATATTATTGGGGTTAAAACATAACAATAGATGTATTGAAATTGTATAGCGACAGATAATTCATTCGTCTCAGTATTTCGTTAAAACATAACAATAGATGTATTGAAATTGTATAGCGACAGATAATTCATTCGTCTCAGTATTTCGTTAAAACATAACAATAGATGTATTGAAATATGTATTGTTTTTATAAGGCGATAAGAGAAACTGGTTAAAA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //