Array 1 88225-87527 **** Predicted by CRISPRDetect 2.4 *** >NZ_WENN01000007.1 Pediococcus pentosaceus strain FAM19080 FAM19080_scf0007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 88224 36 97.2 30 ...........G........................ TATCGTCTGAGTGATCATCTTGTAATTTAA 88158 36 97.2 30 ...........G........................ ACCTAGAAGGCGAATTAGCAAACATTCAAG 88092 36 97.2 30 ...........G........................ GTGGTGACACACCGGTAACAAAGAAGTTCA 88026 36 100.0 30 .................................... TGCTACATTCTATGGCCAAGATGTGTCGTT 87960 36 100.0 30 .................................... TAAATTTCGCCATTAAGCTTCCTCCAGTTC 87894 36 97.2 30 ...........................C........ TTCTGCCGGCGGAATCCACTAAATTTGTTT 87828 36 100.0 30 .................................... TTATTAAAAAGTGCCTTATCTCCTGTCACT 87762 36 100.0 30 .................................... TTTGACCCAGTCGTTGCTTGAACCATCTGA 87696 36 97.2 30 ............C....................... CGCGCGCCGTTATATCTGAATTTTCTATCA 87630 36 100.0 30 .................................... TTAAAAACTAAAACGTCTAATGATAATCTG 87564 36 91.7 0 ...........G.................A..A... | T,C [87529,87536] ========== ====== ====== ====== ==================================== ============================== ================== 11 36 98.0 30 GTTTCAGAAGAATGTTAAATCAATAAGTTCAAGTAC # Left flank : CAGAATTTAGTTTTAACAAAATATTTGCGCCAAATTGAAAAGTTATTTTTACGGTCTGTTACAGATGAACAGCAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCCGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACAATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGCGTTAACTAATGTAGCTCATTATTTAACGCCAGTCGAATTTGAAGAACTTAGCCAGTTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAGCTTCTATGGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAATG # Right flank : AAACTGTACCTCCGCAACAACTTAGCCAGCTGTTGTAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAATTAAAAAGAATCATTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGACCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGGCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATGTGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCTAGTGTGGAATTAGCTCCAAACATCGCACTGAGATTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATCGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACCAAGGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATAATC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGAATGTTAAATCAATAAGTTCAAGTAC # Alternate repeat : GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //