Array 1 106278-107516 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025074.1 [Bacillus] caldolyticus strain NEB414 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 106278 30 100.0 36 .............................. AAAAGGTATTCAACGTTGATTTAGATCCGGCCATCA 106344 30 100.0 34 .............................. TCAAGTCAATACGTCACGATTGTGGTGGATGATC 106408 30 100.0 39 .............................. AAAAATGTTTTTTGCCATATCAATCGCCAACTTCATTGA 106477 30 100.0 35 .............................. GACGACGAGTTCCGCAAACGAGATGTGGAACTTGT 106542 30 100.0 35 .............................. GCAATATCGCTAGCATTGAAGTCACCTTCTCCGAC 106607 30 100.0 35 .............................. ATTGCTGCCCAACAAGCACGAACCGGTTGCCATTC 106672 30 100.0 38 .............................. GTAACAGTTTCGCCGTTTTCTCCGGCAAGTCGGCTTCC 106740 30 100.0 35 .............................. CAACAAATCGCCTACGGTCACGTCATCGGTCTTGA 106805 30 100.0 39 .............................. CTCGCTTTCACATTGCGAGCGTCAAAATCCATTTTCACA 106874 30 100.0 35 .............................. GTATTTTTGGAGCGTCGTAAATAACCCGCTCCCAC 106939 30 100.0 34 .............................. ACCAAAAATGAACGGATTTCCACCGAGGAAAAGA 107003 30 100.0 34 .............................. CTGTAGATGAAAACAGCGTGGACGTATGGCAAAG 107067 30 100.0 39 .............................. CCTAATGTCCGATAACAGCCTACCAATCCCAATCCGTCA 107136 30 100.0 38 .............................. ACGACGATCATTCAGGATTTGAAGCAAACCGCAAAAGA 107204 30 100.0 121 .............................. AGTTGTGAATATGCGTCAAGGCCATTCCTGTGCATGGAGTGAATCCTTTGACACATAGTACGATGACTGGCTTTTCATAGAAGAAGAAACAAGAATGCTTCTTCTTTACGCCAAAATAAAG 107355 30 100.0 35 .............................. TATGCAGAAACTCAGCGCATAAATCAGAGTGATTA 107420 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 107487 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 18 30 99.3 41 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CCAACCCGTCCCTTTCCGACGATATCGTCCGTGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGCAGAAGCCGCCGCTCTGCAACAAACGATCGCACACCACGGAATCGAAGGAGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : CGCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATGGAATGGCTATTGACCACGACCGGTTGTTTAAAGAACTGATCCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTTCCCGACATGCATGAACACATTGATTTCAGCCATTTGTCCTTTCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTAGTCGAGACGAAGCTGAAAGGGGAGGATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAAGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAG # Questionable array : NO Score: 8.76 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1630616-1629053 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025074.1 [Bacillus] caldolyticus strain NEB414 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1630615 30 100.0 38 .............................. ATCTCCAACTGTACTTTCCTTACTTGATCCGGCAACTT 1630547 30 100.0 35 .............................. CACAAGCAAACACATGGTTCAATGCGGTCGTGAAC 1630482 30 100.0 36 .............................. GACCAAAGGCGTTTAATGCCGCAGAAACCGTATCTG 1630416 30 100.0 36 .............................. ACTTGAAAATCGTGAAAGTGGATCCGGAGCGCAACT 1630350 30 100.0 40 .............................. TGGTTTTATCGAAGGTGAAGACTTTTGGACATTTTTGTCC 1630280 30 100.0 35 .............................. TCGAAACAGCGAAAGGCAAGACAGCACGGATCAAG 1630215 30 100.0 38 .............................. TTAGGCAGGTGAAACATCATGGTGACTGTCCAGCTTGA 1630147 30 100.0 36 .............................. ATTCATAACTTATAATATAATTAGAAAGCAACAAAG 1630081 30 100.0 36 .............................. AAATCGGTGAGAAAGAAATCGGGCTAAAGGCTACGC 1630015 30 100.0 36 .............................. GCAAGTAACCGATCTATAACTGGCTCGACTTCTTCC 1629949 30 100.0 39 .............................. GAGTAGTTCGTTCGCGATTCCATATAAACGTCTTGCCCC 1629880 30 100.0 36 .............................. TGTGTCGTGGGGAAAAGAAGTACATTGAGCCGCGTT 1629814 30 100.0 38 .............................. AAATTTTTCAATATCCCCCTAATATAGCTCCATCTCCG 1629746 30 100.0 38 .............................. AAGATATTGCGATCAACGAGGCGGTCGAACTGGATAAG 1629678 30 100.0 40 .............................. ACGGACGAGATGCCCGTAAACAAACCTGTTTTGGCTTTCA 1629608 30 100.0 38 .............................. TCTTGTCCGGCTTCGAAGCCGAAAACCAGCCAAGATTC 1629540 30 100.0 35 .............................. TCCTTTCAAATTTTGGTCAAAGACACAGACCAAAT 1629475 30 100.0 36 .............................. GTGACAAACGGGCTTGCAAGTAAGAAACTAGCGATT 1629409 30 100.0 36 .............................. TCTCTAGAAATAGAGGTGAAGGAAATTGCAAAACGT 1629343 30 100.0 34 .............................. GCTCGAGATTTTCGATATGGTCAATCAAGTTCAT 1629279 30 100.0 36 .............................. ACCTTTAGCTCCTTCGCTGTGTCTCGGAAATTTGTC 1629213 30 100.0 37 .............................. CCGTTTGACCTTTATAATATTTTGGCTGTTATCAATG 1629146 30 96.7 35 ................C............. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 1629081 29 73.3 0 ......G...CG.....A..A.GC-..... | ========== ====== ====== ====== ============================== ======================================== ================== 24 30 98.8 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTGATGATTGTGGAATTGAACTTGACAGAGATCGAAACGACAGTATCAATCTTTCGAGATATCCTGCATAGCGACTGGTACCGTGAGTTGCACGGGAAGTGAAGCCTTCGGAGCGTCAATCAAACGAGAGCAGTTTCGGCGAAATCGGACAAGGATCAAGCAGGGAATGAAGCATGGGATTGAACAAGGACGCCAAAAAGGATCGAGGAAGGGAAACCCGACATCGCGAAGGAAATGTTGATGAAAGGGTAGGATATCGACACGATCCACGAACTGACCGGGCTGCCGGCGGAAAAGATCGAACAGCCGAAGAAGTCAACCCGCCTTTGCATTGTCGTCGACCTCCAATCATGCAAAAAACCCGGGGGATCGACGACAATGGTTTTTGACGCTCCAAGCCTACAGCCATCACGATTGAAAGTCATTGACAGAATTTTTGAAACGTGCTATGCTGAAAATAGCTCCAAACCGAAAAGCTTGATGGAACAAGCCTTTTTGGG # Right flank : CCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACAGGGGTGGGATGGATGCGCCGCAAGCTTCGCGATCTTGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAGTCACCGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGGGAAGATATGAATGAGCG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 1645439-1643826 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025074.1 [Bacillus] caldolyticus strain NEB414 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1645438 30 100.0 35 .............................. TCGTCGTACAAATACATCGTCGCAAACCTCACTTC 1645373 30 100.0 35 .............................. AATGAGTTCGATGAGTGGATCGAACGCGTGAATGA 1645308 30 100.0 37 .............................. GCACCGCATCGTCGTCGATCAATACGGCGGCGATGTC 1645241 30 100.0 37 .............................. CCATTTCATCCAGAACAGCAACCGCCTTTTCGCGAAT 1645174 30 100.0 36 .............................. GGTGCTTCTACTTCGAAATCCGCAACCGAAGTCGCA 1645108 30 100.0 36 .............................. CAGAAGGTGAAGCGTCCAACGATCACCGTTTCAATC 1645042 30 100.0 35 .............................. CTCCTCGACGAGTGGCAGAAGCGCACCCTTTTGTA 1644977 30 100.0 35 .............................. TCAACAAACCAAAGACGTGGCTATGCTCCAAGAGC 1644912 30 100.0 38 .............................. CCGGAAGAGATCAAGGAGTTGGCGGATGACATCCTAGA 1644844 30 100.0 37 .............................. TAAAGCGTCTGGAAACCGTTTTTTCGGGCTTTTACCG 1644777 30 100.0 36 .............................. ACAAGAATTTCCGATGGTTTGTTATGACTGTAACAC 1644711 30 100.0 35 .............................. CATGATGCTATGATGCATGACATCGAAGCGAAAGT 1644646 30 100.0 34 .............................. AATGCGTTTGGTGATGTTGACGGCATCCCAAACC 1644582 30 100.0 36 .............................. AGACGGGGTGGCGTTTTATTATGCTCAAAATCGAGG 1644516 30 100.0 37 .............................. GGTCTCAATTTCAATAGGTTGTATAGCTCTTCTCGAG 1644449 30 100.0 35 .............................. TCAGTTCATCCAGGCTTACATTAAACGCCTGGCTG 1644384 30 100.0 39 .............................. TCGCCGGGGTGTTCACCGGCGACTGGAAAACGGCTTTTG 1644315 30 100.0 34 .............................. TCAAGAGGAATTGCCTAGACTGTTGGAACGACTG 1644251 30 100.0 36 .............................. CTCGGAATGGAAGGTATATTCCCGGTTATCACTTTT 1644185 30 100.0 38 .............................. ATCTGGAAAAAATAAAACAGTTACAAAATGAAATCATC 1644117 30 100.0 37 .............................. CGGAAACAAGCGGAGGGACAGATTGGGAAGATAATGA 1644050 30 100.0 36 .............................. AGCCGCTCATAAAGAGTTTGCTTCGGATACTTGTCC 1643984 30 100.0 36 .............................. GAAACAGATCCCGATGTGTCGACGAACACGCATACG 1643918 30 96.7 33 .............T................ TTTTCGCTTGCGGCGGTCAAGCCAATCTATGAT 1643855 30 76.7 0 ............T.C.CA...A.C....C. | ========== ====== ====== ====== ============================== ======================================= ================== 25 30 98.9 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AACGTTCGACGGAAGAAAGAAAACGCAATTTTTTGACCCCGATGATGAGGTGTTCCCCCACCTGATTGAATTGAATTTCCGTCATAAATATGAAGCGTACTACGGCGTTCCGCCGACGGAAAGACTGTTGATCGAGCCGGTTCACGTTCATCATCGTCATCGTGTGGTGACAATGTTCAAGAATATGTATATTACAGGGTGGCTTGGCTATTACCGCCTCTGTTCTTCACCAGAACAGCTGACATTTTTATATCATGTCGGCCTAGGCAGCCGAAATTCACAAGGATTCGGCATGTTTCGCCTTAAAAGCGAATAAACGGGTCAAGAGATTGTCGTCGACCTCCAATCGTGCTAAAACCCCGGGGGATCGACGACAATGGTTTTTAGCGCCTCAAGCCTACAGCCATCAAGGTTGAAAGCCGTTGACAGAATTTTTGAAACGTGGTATGCTGAAAACAGCTCCAAACCGAAAAGCTTGATGGAACAAGCATTTTTGGGGG # Right flank : CTCTCCATCTTCGCGCGCAGGTGTGATGGGGGGCTCGTTGTTATCGCAGAGTTAGTTTAGACCACATCTCTCATGTGCTTCGTTTGCGGAGATGAAGCGTTGTGCGCAACGGATGGGCGCCTGCGGAACAGGCAGCACAGCATTCTAAGTTGGGCAAAGGCATTTCTAGTCTCACAGGTTGCCTTTCCAAGAGGCGGGAGAAAAAATAAGATGGCGGCGATTTATGTCGGCGGCATCTTTCGATCGAGGGAATCCCTTTTGAGCAGGGGATTCTTTTTTTGTGTTTCGTCCTCCGACGTTGTTTTGTGTCACTCCTTAAGAGGGGGGTGAAACAGTTAATAAATTTCTATAATTTTTTATAAAACTCTCTACAAAAATAATAAATTTTATGGTGTTATTTATGTAGGGAGTTGATTGTTGTGAAGTATTATAGTATTGGCGAATTTGCAAAACTTATCGGAAAAAGTCAGCAAACTTTGCGAAATTGGGATAAAAATAAT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 1657433-1655738 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025074.1 [Bacillus] caldolyticus strain NEB414 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1657432 30 100.0 36 .............................. CTCGATATTGTGCTTTGTTATGCCAGCACTTGCAAG 1657366 30 100.0 36 .............................. TCGACAAAAATCATCCGGGATACCCAGCAAATTCAG 1657300 30 100.0 36 .............................. TGGTTAGAGTATTATCGTTGAGAAGGAGCAATCAAG 1657234 30 100.0 37 .............................. AATGTATAAAACTGGCTAGTTGCGGCTGCTGTACCAC 1657167 30 100.0 35 .............................. AGTAAATAAAGCATATAATGTAAGTAAGAAACAAA 1657102 30 100.0 37 .............................. AAGATATGAAACGCAAAGCGGCCGAAAAAGCAAAAGA 1657035 30 100.0 35 .............................. GGGAACATCCGCGGCAAGAAGGCGAAGATCGGCTG 1656970 30 100.0 36 .............................. CGCCAAGAACAGAGAGGATCAATTTATTTCGAGTGA 1656904 30 100.0 39 .............................. TAATGTCTTCACCTTGCATTGATCGGCTGATAAGTTCGC 1656835 30 100.0 37 .............................. TGTTTGTAGCGCGTCAATTAGATATTTTCCGTTTAAA 1656768 30 100.0 36 .............................. AATGTTGGGTACTGTTCGATAATTACAGTATTTTCT 1656702 30 100.0 39 .............................. TAATGTCTTCACCTTGCATTGATCGGCTGATAAGTTCGC 1656633 30 100.0 36 .............................. TGAAGGGGACGATGTTTTTGAGTTTACAGACGGTTT 1656567 30 100.0 38 .............................. TTCATGAGCGGTGAGGATACATCCATACTCATTCCAGG 1656499 30 100.0 37 .............................. AATCGGTCGGGAGCTGATCCCACGAATGAAAAAACCA 1656432 30 100.0 37 .............................. CCGTTCGGCTTCACGATGATTTGCGCAGGCTTCCTGG 1656365 30 100.0 36 .............................. TCAAGGAGCAGGCCGAAAAAACCGAGGAAGAGCTCG 1656299 30 100.0 37 .............................. AGCTTTCTTTCTGTCTCCACCATCTGTTGAGCGTACA 1656232 30 100.0 36 .............................. CACTGTGAATCTTCGGAAACACTTTTAGCTCCCGCT 1656166 30 100.0 35 .............................. TTCCATGATTCAAAATGCAGGCATCGGCTATATCT 1656101 30 100.0 39 .............................. CTCGTTGGGAGTAGGCTCTAATCCTCAAACACCTCATTC 1656032 30 100.0 37 .............................. TCCGAACGTGCAGCGATCGCAAACAAACTGAATGCCG 1655965 30 100.0 37 .............................. AACAATAAGGAGCGATGACTATGCCGTTGCCGAAACA 1655898 30 100.0 35 .............................. CACTCCAGCGCTCCTACGGGCTTTTCCCCGCTCCC 1655833 30 100.0 36 .............................. AGAAATAGAATGGGTGATTCCATGCCGCCCATAAAA 1655767 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 26 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GAAGAGGAGGAAGCAAAACGGCGAAACGAGGTGAGCCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGCTGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGATAAAGCAAGGGATGAAGCAAGGGATGAAGCAAGGACGCCAAGAAGGGATCGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGATACGATGTCGACACGATCCACGAACTGACCGGACTGCCGGTTGAGAAGATCGAACGGGTGAAGGGGTAAGCAGAGCAGACTCTTCGCCGTCGAGCCTCACATTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTGCGCAAAAATCCTACAGCCATCACGGCTGAACCATATTGACAGAATTTTTGGAATGTGGTATTCTGGAAACAACCCAAAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGG # Right flank : CAATTAGTTTCAGAATACACTACTCTAAAACCGGTACTCATATTGTTCCAACAATAAAGAAAGGTGAGGAATGATGAAGCTGTGGGAATATGTCGGTAAAAGGGTAAGAATTATATACAAAGACGGAGATGTGCTAGAGGGATTTGTCCGTGATTACTGCGATGGAGAGGATAGTGAGGATGGGATTGACAGCTTGGTAATTACAAACCAAGAGGCAAAAGAACTGGGGATTGTTTATGGGGTTCTATATACATGCTCATTGAAAAGTTAACCTTCGCATAAGCGGTGCCCACTCCGGTTATACTGCTCCTAATGAAAAACATGGAAAAGGAGCGGAATTCTGCATGAAACGTCTCAAAATCACCGACAACCATGGATGGACGCCCCGGAAACTCCGCAAGCAGGAACGGAAGATCAAAAACGCCCATCTCCGCCAACGTGTGATGGCCGTCCGCCTGGTCATGGAAGGCTATTTGGGCAAAGACGTGGCCTCCATGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //