Array 1 689055-692358 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKVB010000009.1 Numidum massiliense isolate MGYG-HGUT-01510, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 689055 30 100.0 39 .............................. AGGCTCATACGGGTTGAGCCGCGATACACCGCTCCGCGA 689124 30 100.0 37 .............................. TAAAATCGATCATTACTTGTACTTGTTCATCTGACAA 689191 30 100.0 37 .............................. TCGCGTAGCGCCCATGTATCAGCCGGAATGTACAGGT 689258 30 100.0 36 .............................. GTGTCCGGGACATGGTCAACCTGCTCCGGGAGGCCG 689324 30 100.0 38 .............................. TGAAAGAATATTGGGGTGTTCATCGTGGAATGAACAGG 689392 30 100.0 36 .............................. CCATGACCGTCTCCTTTCGATGCTTCTACTTGTATC 689458 30 100.0 36 .............................. CGGGGTTCGTCGATTATCTCCGAACCACCTATGACA 689524 30 100.0 38 .............................. AAACGCTTAGGGCGTCTTCGATCCTCTCCCGATCAGCT 689592 30 100.0 38 .............................. ATCAGTGATGTATTTCTGAATGTACCGTTGGTCAACGA 689660 30 100.0 36 .............................. TAAATCTCTGCCAACTCGCCAAACGTAACAAACTCG 689726 30 100.0 35 .............................. AAAGTCATGTCAGGTGAGGCATATAATAGTGCTTC 689791 30 100.0 36 .............................. ATCCCAGCCATCCCACACTCGTTCCTCCGCGCGCCC 689857 30 100.0 37 .............................. ACGCTAATGCCGGTAACTAACGGCGCTAGCGCGTAGA 689924 30 100.0 38 .............................. AAAGGAATGACGATCGGCATCATCGGAGGCTGGCGCCG 689992 30 100.0 39 .............................. CCTGCTGGCACCTCGCGAATTACCTTGATGTACTCACCA 690061 30 100.0 35 .............................. TCCGAATGCGGCAGCTCGTCCCCTTGAACCTGGAA 690126 30 100.0 35 .............................. CAAGATCGTCATAATCCAGCCCTATTTCGATTTTC 690191 30 100.0 38 .............................. AGTATAGTGACAGAGTGAAAGAGATCGTTGCGGTGGTC 690259 30 100.0 36 .............................. GTCGCGGCTAAGCGAGAATTGAGCGCGAGCGGGAGT 690325 30 100.0 36 .............................. TCCCGTTTTGTGATCAACCCGTACTCCGATTTGGAG 690391 30 100.0 35 .............................. CTGTGAGTGGGATTTCCCCGCTCTGGCACGTAAGC 690456 30 100.0 37 .............................. CACCACTCGGACACCTTTTCAGGCGCTGGAATGGCCG 690523 30 100.0 38 .............................. TCTAATCTGGTCGGTATTCGATAACATCTTCGATTTTC 690591 30 100.0 34 .............................. TCCCGCACAAGCTTTTCCATCCAGCCGAAGTCTT 690655 30 100.0 38 .............................. TAAAATCTGGTCTCATCCTCGTCCAAGACCCGAAGAAA 690723 30 100.0 39 .............................. ACTGAGGATGAAATACGACGGCGGTTAGGCGTTGCTATG 690792 30 100.0 36 .............................. GGTGTGGCGCGCAGGGTTCACGGGCTAGTGCCGCGT 690858 30 100.0 35 .............................. GGAATCCAGCGTTGAGTAGCTTGTTTCCGAGCTCT 690923 30 100.0 38 .............................. ATTGTCATCTGCATCGCCTGTTCTCACCAGACGAATAT 690991 30 100.0 37 .............................. CGGCTGTACAGAAAAGATAACCGCGACGAGGTATTGA 691058 30 100.0 36 .............................. GACGCTGGAGTTCACGGGGACATCCAAAAGGGGGCG 691124 30 100.0 41 .............................. GGTGCTACCACGTCGTCGCGCTGAATTCCAGAATCTTTCAG 691195 30 100.0 38 .............................. CACTGTTCAACCAGGTATTAGAACGGTTCGGCGCGGAG 691263 30 100.0 36 .............................. ATATATGGGGACATGTTGTTTCCATCCGGTCGTGCA 691329 30 100.0 37 .............................. CCGATATCGAGAATGTGGATTGGCCGCACGCGACCGT 691396 30 100.0 37 .............................. GTCGAACGAGACAAAGGTGTTTAGCAGCGAGCACAAA 691463 30 100.0 36 .............................. GGGAACAATGATATTTGTTAGTGTCTTCATTTCAAT 691529 30 100.0 35 .............................. GAAAAAATCCAAGAAAAAAATAACCAAAAGGAGAA 691594 30 100.0 36 .............................. CTGCGCATCGCCGACGATAGCACATTGAAGGTGATG 691660 30 100.0 35 .............................. TTGTACGGGATATTCGTGGAAACAAAGACAATCCG 691725 30 100.0 36 .............................. CTACTATGCAGGCTAGGAATAGTCTAGTGTTTTCAA 691791 30 96.7 38 .............................T GTGATTTCCGCACTGAAAGATTCTGGCATCTCGTGGGA 691859 30 96.7 35 .............................T CGAAAGACAGGCGTGTACCCGTACGTCGAAGCGCC 691924 30 96.7 38 .............................T ATCTCGACAAACACGATCCGACCGCCAGGAAACAAACA 691992 30 96.7 39 .............................T ACCCACGGGGCGTTCAAAGATGTGCTCGCGTACGACGCA 692061 30 96.7 37 .............................T AGAAGAAAATACAAAAGAAGAACAAGACGAAGAACAA 692128 30 96.7 36 .............................T CTCGTCCCTAAGGCCATACGAGGATAGAAAAGTGAA 692194 30 100.0 36 .............................. GATGTATTCTACAGTTTCTCGGTACCACGCTCGGGA 692260 30 96.7 39 .....T........................ CAGTAATACAGGTGATACCTTTTACCGAGCGCATTTTGA 692329 30 90.0 0 ...........G................GT | ========== ====== ====== ====== ============================== ========================================= ================== 50 30 99.3 37 GTTTGGATCTTACCTATGAGGAATTGAAAC # Left flank : TTAGACTGCTACACTTGCGGCGATACCGTCGATCCGGAAATTGCGATCCGTTATTTGTTATCTGTGTTGCAGCCGGAGACATTTCATTTGAAAAAGATGATCCGCGGAATGGGAGAAATTCGCGTCGAATTACCCCATTGTCTCGTAGCGGCTGTGGATGAATGGTGAGTGATATTGGTATTGTTTTGATAATGATCGGGTATATGTCGCGACGGAGGGATAGTGAAAAATTGGGAAGAAATGATCAGTACACGGCTCGTCGTGCAGTTTAGGATATTCACGAACGGCAAAGGTTTAGCCGACACTTTTTGTCGTCGACCCCTTGTAGCGTTGTTACCCTAGGGGATGGACGACAAATTGAAAAATGGAGGTATTGCGAGGTTAGGGGAGAGAATAAGAGGAATAGTGGGATTATGGGGAACTGCGACTGGGATTAGACGATTGCCTCGTGCTTGTTTGGGTTATATGATGGGAGTAAGTAGCTATAAGCGTTTTTTTGG # Right flank : TGTGACATTTTCGGGAGGAAACTTGAATTACCTTACGGAATAATATACAATTATGTCCAGATGGGTTGCATCCAGTGACGTTTATTTTTTATGCTTTTCCAAGCGACCATCTTTTCATTAACTTTTATAGAAAGCGCTAACATCACTCGCATTCATTCGAAGCGAGCTGTAGTAGTGAGATTTCAGAAAGGTATTCTTTAGAGGTATTCGGTACATCTCTGCAGAATCATCTGAGTAAGAGCAAGACTTCGGATGTAGATGGGTCTTTAAATTGTCATGAGGGGATGGGTTAAAGTGAGTAAAAAGTCTTCTATTGTCGCTCTAACTATTGTTATGTTTCTGTCCCTTTCTCTTGCGATTGGTTCCGTCTCCAACGCAATGGGGAGTAGCACTCTTGAGCTGGAAGAGACGTTTACTACCGTGAGTAACGGTTGGAGTAAAGTTGAACGTTGGAGAGATACGCGCCAACTATTTTCGATGGAAGATTATCCACCGGACGG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 1800609-1797181 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKVB010000009.1 Numidum massiliense isolate MGYG-HGUT-01510, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1800608 30 100.0 35 .............................. AGATTATACCTAGCATCCCCGTGGAAATCTCTCAC 1800543 30 100.0 35 .............................. ACAAAAGTAGTCAAGTCAACCGGAGAAGTGAAACC 1800478 30 100.0 35 .............................. AGCAGCTTAATGAGTTTGAAAATAGTGGTTGTAAA 1800413 30 100.0 38 .............................. GAACGAAATGATTTTCTATCGAGGAACAGCAGGTGAGT 1800345 30 100.0 37 .............................. ACGAGCGCCTCTGACAGCGTGCTAAGACTATCCTCCG 1800278 30 100.0 36 .............................. GGACGACTGGTATGGAACACGCCGTATGCACGCCGA 1800212 30 100.0 36 .............................. ATTAATCTGCTCCTGTTCTGCCCACTGTTTTTCCAA 1800146 30 100.0 37 .............................. AAAGAGGGAGTACGAGCGAACGCGCTCAATTGGAATT 1800079 30 100.0 38 .............................. ACCAACACCTGGGCGTGTTTGTGCCGCCGTACTACGCG 1800011 30 100.0 36 .............................. TTTTTTCGACTGTATCGCTATCACCTTGGGTGTCCT 1799945 30 100.0 37 .............................. TTATAACCGCGACTTGCCTTCGATAGAAGAGTTCGAT 1799878 30 100.0 36 .............................. ATAAACCCGAACAAATACCGCGGCTTGGGTTTGATT 1799812 30 100.0 38 .............................. CTACGATCGCGGTAGCCCGGCTGCCTTTGTTTCTGTGC 1799744 30 100.0 38 .............................. TCATAGTTTTGTTATCGATGCGCCGGAGCCAAAGCACG 1799676 30 100.0 37 .............................. GGAAACACGGCGTAAGCCGCCACGCCGAAAAGAATAA 1799609 30 100.0 36 .............................. GGCTCAGGCTCCTGTCAGCTCTGCTTCTACTCTATC 1799543 30 100.0 37 .............................. ACATTAATCAGTAGACTAGTCACCGAAAACGAAACCG 1799476 30 100.0 36 .............................. CCGCTTGCGCCAGAGGGTCGGCGGCATTGATTCGAA 1799410 30 100.0 35 .............................. CGGGGTGGAATGACATGGAGATACGAGGCGAACAC 1799345 30 100.0 39 .............................. AGGCGAGCATGTCGCGGGTCAAAGCGGTGTCAGGCGCGA 1799276 30 100.0 38 .............................. AAAAAGGGAGCGGTGCGTAATGGAGAGCGAACAAATGC 1799208 30 100.0 37 .............................. TGGTTCCGCAAAGACAAGCCCGCTGGGCGGTATGAGT 1799141 30 100.0 38 .............................. GTGGGACGAAAAGCAGTTCCACATCATCGGCGGTCATG 1799073 30 100.0 35 .............................. GATGACTGCCGTGGAGGCCGAAAAGCGGTGGGGGC 1799008 30 100.0 38 .............................. CCTGTACCGCGCCCCGAGGCGTTCGCTAGTCGTATATC 1798940 30 100.0 35 .............................. TGCGGGGGCTGTACGTCGTGGCCACGTCAATCACG 1798875 30 100.0 39 .............................. ACAAACGACGAAATGCTTCGCTTCATGGATATTCAGTCG 1798806 30 100.0 35 .............................. ACAAATTCTGACACCGTAGCAAACAGAAGTGTCCG 1798741 30 100.0 35 .............................. CGGCTGGACAACGCGAGTCAAGATCGGCGATCGCG 1798676 30 100.0 36 .............................. TCGCATCCGTCACATTTTCTATCTCGCAGTTTCTCA 1798610 30 100.0 35 .............................. GTCACAATATATGCGTCCGAAGCTAGAAAAATAGA 1798545 30 100.0 38 .............................. ATGAACGGTCGCTGCCAGCGGGCAGCGTCATATTTGCT 1798477 30 100.0 38 .............................. AAGGATCCGACCGTGAAGTTCTTGCGCTACGATCGTAC 1798409 30 100.0 36 .............................. TAGTAGTGGTCTCGAAGCTCTGGGGCATACAGCCCC 1798343 30 100.0 37 .............................. TCGCGCTGCTGCTCTTCCTTCAGTTTCTCTTTGTAAC 1798276 30 100.0 37 .............................. TCGCGCTGCTGCTCTTCCTTCAGTTTCTCTTTGTAAC 1798209 30 100.0 36 .............................. TTGAATTTTTCTGGAATCCCCAACGGTTTCCCGTCG 1798143 30 100.0 35 .............................. TCTACTTCCGCAAGTAGGTCGAGCGTCGGAGTAAA 1798078 30 100.0 36 .............................. GATGTAGTCGCCCTCGTCTAGATACACTTGTCCAGT 1798012 30 100.0 37 .............................. GCGCGCCAAGTAGTGCATACGCAATCCCGCTGAGATA 1797945 30 100.0 35 .............................. ATCGCCTCTATTTAGATATGCGCGAAGCTCAACGC 1797880 30 100.0 36 .............................. ATAACAAACGAGCGTATGCCATCAGAGAATCTCCTT 1797814 30 100.0 36 .............................. ATAATCAAGAAACGCTATCAATAAAGACGTTTCCGG 1797748 30 100.0 38 .............................. CGCCTTTACACGCGCCTGTACTGCATGGTCGATCATGT 1797680 30 100.0 38 .............................. ATTGGTTCGGCAAAGATACTATTCCGTCGCTGTTTATA 1797612 30 100.0 39 .............................. ATGTCGATGGAGACTTCTCCCCAACCGACACCGTTTCCT 1797543 30 100.0 36 .............................. TCCGACACGTCGAACATCAATGTGCCGGAGCGGAAC 1797477 30 100.0 39 .............................. TGGGAGCGGTGCCGAGAAATCTACACCGATGCGCGACTA 1797408 30 100.0 35 .............................. GGTTTCATTCCCTTTCAGAAATTGTGGACGACGTC 1797343 30 100.0 39 .............................. ATCGGTCGTACGACGGAAGGAAGCTGCGCGAGATGACGC 1797274 30 96.7 34 ...G.......................... ACGCATCATTGATACTGTGAGATGCGTTTAACAG 1797210 30 96.7 0 ...G.......................... | ========== ====== ====== ====== ============================== ======================================= ================== 52 30 99.9 37 CTTACGATCTTACCTATGAGGAATTGAAAC # Left flank : TACTTTCTTCTCCTTCACCCGATAGTGTTTCTGATAGTAATAGGTGGAACGCGGTACGTGGACAATCCGTAAAACGGTTTGGATCGGGTATCCCTTAGAAATCCACTTGTCCGCTACTTCAATCTTTTCAGCAAGTGAGGGTGCTGCTTTTTTACAAGATCACGCAAAATGGCAATTTCTAAATCCTTTTCGCCCAACAACCGTTTTAGCTGATCATTTTCCTGAGCAAGATCACTGAATTCGCGTGGTTGGGCGGATTCGATCGGGACGTCCCCGTAGTGCCCGTCCTTATATTCGCGAACCCATCGGTTAAGCAAGTTAGAACCGAGATCATAGCGGCGAGCAACTAGCGCTTGGTTACCAACCTCCATGGCTTCCTTTGCGACTTGGATTTTAAATTCCTTGGTGAACTGACGGCGTTTCATTTGATTCTGCCCCTTTCATCACTAGTATAACTTAAAGTGTTTAGTGATGTCCAAGTTACTATAGGGGCTTAATAG # Right flank : GACTAGTCGTTGCGGTCGGGAACGAAAAAGCGTCATTGTGACCTCCAATTTGGAGTTCGGACAATGGAACCGTGTGTTTGGTAACAACCAGTTAACCGCAGCTTTGGTAGATCGTCCCGCGCACCATGCACACATTTTAGCTTTCAAAGGGGAGAGTTACTGACTGACACACGCGCTTTCGCATGTGTCGCCGACGGCCCAATCTTAATGAAAATTAGGCTGGCAAGCCCTCAGCACTTTTCCTTGCATTTTTGTATACCTTTTGCTTTCAAAAACACGTGTTCTAATCAAATTTTAATGTTGCTCTCAGTGGGCTTTCATCTTATCCTTTTATGATTAGGTTGAAACTCATCTGAGGGAAGATGAAACTAATTTGGGGGGAACATTAAATGAAGAAAAAGGTTTTTTCTATTTGTATCGCATCACTCGTTGTCGTAGGGGGCTTTGGGGTGGCTGGTTCGGTATTCGGTTCGTCTAGTTCGGCTAATATAGTTTCTGCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTACGATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 3 1803513-1802145 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKVB010000009.1 Numidum massiliense isolate MGYG-HGUT-01510, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1803512 30 100.0 35 .............................. AAGACACGAAGAAATATGAAAGGTTTTTCTCTAAA 1803447 30 100.0 36 .............................. GATGACGGGGCATACTGCTGTATCAAATGCAAAAAG 1803381 30 100.0 37 .............................. CTTGAGCTCTGGAAAAAGGAGTTCCTGGAATCATAAT 1803314 30 100.0 34 .............................. AACCCCCCGCCACCGAACCATCCGGTGATAAAAG 1803250 30 100.0 37 .............................. AGCGCCGGTACGGTCCAAACTACTACAAAGACGAGTG 1803183 30 100.0 36 .............................. AGCATAGGCAACGCGAAGAGGTGCGGTTGCAGGAAA 1803117 30 100.0 39 .............................. TCCTTAGAAAAATTATACCCCGGATTGTAATACAGACGG 1803048 30 100.0 39 .............................. AGCGCCGCGATAAAGTAGTCGTGGCTTTCAGTCGCAGAC 1802979 30 100.0 38 .............................. TTCGCTCGGGACTGGGAAGGGAAAAGGGTGATGCCGGA 1802911 30 100.0 38 .............................. TCACGAGTTCCAGGACTCACTGGAATATATGCTTGCCA 1802843 30 100.0 38 .............................. TCTTCGATGAAGCGAAAAATGGCGTTTGAGGAGAACTT 1802775 30 100.0 34 .............................. CGTGGCAGCTGGCTACCGACAAGAGGGCAGTCTC 1802711 30 100.0 35 .............................. CAAAAAGCCCGACGGTATTGACTACGACCCGACAC 1802646 30 100.0 36 .............................. AGTATTCCACATCAGAATAAGGAGGGATCGAATGAA 1802580 30 100.0 39 .............................. AACGGAGATGATCCGCACGCCATGGCCTAGTAAGACTTC 1802511 30 100.0 39 .............................. CGCTGACTGACGGATATGCTTCTGCTGTTTGGTTGTCCG 1802442 30 100.0 35 .............................. AGCGATGGAGCGTCATTTTCTCTCGCCCACTTTTC 1802377 30 100.0 37 .............................. CCACTTTGCCTTGAGTACGACTTCTCTAGGCTCTTCC 1802310 30 100.0 40 .............................. AAGTGCAACGAACCACGTACACAAATAAAGTCATGAAAGC 1802240 30 100.0 36 .............................. TTCTCGTGGAGAACTTTTCCTTGATACACCAATTCG 1802174 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 21 30 100.0 37 CTTACGATCTTACCTATGAGGAATTGAAAC # Left flank : CTAACGCCAATTATGTAAAATTGAAGATGGAGTTAGAGCGTCTTATGAATGAGGAGGAGGATTCGGTGATCTTTTATACGTTCCGCACGCAGAAGTATTCAAAGCGTGAGGAGATGGGACTGAAGAAGGGCGGCGAAGAATTCATTTTGTGATGGCGCCGTATTAGTGTTGTATTGTTTTATTAGTGATGAAGAAAATGAAGAAAGACAACGGGAATATTTGTTGTTTATTCAAATGTGTTTGTGGGTGGGCGATGGCTGTCAATTAAGCCGGTATTTCTTTGCTTTGAAGGGGATTTTTTCCGCTTTTTTGTCGTCGACCCTCTATGGCGTTGTAACCCCGGGGGGATCGACGACAATTTGAAAAAGCGAGTATTTGTGAGAAAGGGCAAGAAAGAAAGGGATTACCATGTGATACGCATTGTTTTCGGTTTAACGAAAAGGTTGTATATCGTGTGATGACTAATGTATGATTAGTAGTAGTTTCAAGGGTTTTTTGGG # Right flank : TCAGTGTACCAATCAAAGCTAACCCTAACCTTGCCGCTTACCGGATAAACCCCTTAAAACTGGACATACATAACTACAAGCTCACGTTATCTCTGGTTCTCGCTTCCTTTCGTCAATAGAAGTGTAGTCGCTTCAGACCTTCCGTCAAGGGTAAAGGCTACGCCCTCGCTTTCGCTCGCCCTTGACGTCACGTCTTACAGCGGCTGTTGGCTTGGAAGACGAAAGGGAAGGATCAGAGTCGAACGGCTTTCGTGCGCAACGAAGATGTTTGATGCGCATGGAAAAACTGCGCGGGGCTCATGTCCCCAATACTACCGTGTATGCGGCGGTTGTTATAAAAGTCCATAAAGCCTATGACGGTACGATATGCTTCCTCGTACGTCTCAAAGGAATACTTGTTGAAGCATTCGTCCTCAACGATCCGATGAAACGCCTCAATATGGGCATTTTTATTCGGTGTGTTCGGCGGAATACGTTCGTGCTCACAACCGTAGTGTTCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTACGATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 4 1830621-1827366 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKVB010000009.1 Numidum massiliense isolate MGYG-HGUT-01510, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 1830620 30 100.0 37 .............................. GGATACATTTGAGCGCATATCATGCCGCCATATTCTG 1830553 30 100.0 38 .............................. TCGAGAATGCCGCTGTCAGTAGTTACATCATGGGTGCG 1830485 30 100.0 35 .............................. TTGATTCGCGAACGGTCTATCGACCGCGAGGTTAA 1830420 30 100.0 35 .............................. TTGCGAAGTATATCGCCTCCTTCCGGCGCCTCTAC 1830355 30 100.0 36 .............................. TCAATCGGCTGCATAGAACAGAGATCCCGGTATTCA 1830289 30 100.0 36 .............................. CATGGCAGATCGAGACACTCAATCAACTGGGCGGAC 1830223 30 100.0 37 .............................. ACTCATGCCCGATCCTCACGCCCTCGCGTAATGCGGC 1830156 30 100.0 37 .............................. GATATGGACACGATCAAGCTGGACGGAGACACGCTGA 1830089 30 100.0 38 .............................. TCGGTTGTTTTCCGACAACGGAAATAGAATCACCGCCG 1830021 30 100.0 36 .............................. TTCGGTCTTCCCTTGTACAGTCAACACAACCAGACG 1829955 30 100.0 39 .............................. AGTCCTCGGCCCGCTCCAAAAGATCCATCGCCTCACTGG 1829886 30 100.0 35 .............................. AAGGAGGAAATGACTGATGGCGAATGCAATCAACT 1829821 30 100.0 36 .............................. GCGGGTCCACCTCCCGCGCGGGTTTCCGTTCAGTTT 1829755 30 100.0 38 .............................. TGCTTGAACCGTATGAATCCTGTCTCCATGATCAGCGG 1829687 30 100.0 37 .............................. CGGTATCGTGCAGGACGTTCCCTTGGTCGCTGATTTT 1829620 30 100.0 37 .............................. GCGTAATCATGCGATCGTACCACTCCGTTTCGTAAGG 1829553 30 100.0 41 .............................. ACGACTGGGAGGTTGAAGACGTTTGGGGTGCCGTCAGTCGC 1829482 30 100.0 37 .............................. CCTGCTGAAACAGTAATTTGTGCGAGTGCTATTTCTT 1829415 30 100.0 37 .............................. CATTTACGCCGGAAGAAACGAACGAAGGTGAACGGCG 1829348 30 100.0 38 .............................. CGCCGTCTAACTCGATGGACAACTTTAACAACCGCATC 1829280 30 100.0 38 .............................. CCGGATGTGGTGGTGTCAAAGCTAAGGATGAAAAAAGT 1829212 30 100.0 43 .............................. GCTGAGCTGTACGACTTCAGGTTTACGCCTTCTGCAAAAGAGA 1829139 30 100.0 39 .............................. CACAAGGATCCGCATAATACCATCAATACCGTTTGATGG 1829070 30 100.0 37 .............................. CCGGATCAACAACGATCGGCCAGAATCTCCTGCCACC 1829003 30 100.0 39 .............................. TTACCGAACGAACCCCGGAACCGCGACGATGTGCCCGGC 1828934 30 100.0 37 .............................. TGGAATTGCGAATGCTAATCCGGTAGGCACAAGTACC 1828867 30 100.0 39 .............................. AAATATCACCGGCAGAGTACGCGGCCGTCAACGACGGTA 1828798 30 100.0 37 .............................. AGGACTTGAGAACAAAAAGGGGTCTCTCACAAGCTGA 1828731 30 100.0 36 .............................. ACGAATGGTTCAGTTTCATGTCGACGGGTACGGGCG 1828665 30 100.0 38 .............................. TCCCTTCGTAACGCTGTATCAGTCATACAGCCAAAATG 1828597 30 100.0 36 .............................. ATCATTGCGTACCTTTCGAAGTCCACCTCGTCCTCC 1828531 30 100.0 36 .............................. GCAGCAGTGTATGATATAGATAAAGAGGTGATTCAA 1828465 30 100.0 38 .............................. CCGATGTTCCGCAAGCTCATCGAAACGGGCACGAAAGC 1828397 30 100.0 35 .............................. GATAGTCTCCGTTTCATGCCGCGGCTCGGGCGCGG 1828332 30 100.0 39 .............................. TCGGCTCCGTCGCCGTACTCTACTGTAGCCGGCCCGAGT 1828263 30 100.0 36 .............................. GACAATGCCCCTCCGCATTTAGAGGGGCGCTTCAGT 1828197 30 100.0 37 .............................. TGCGCTTGCAGGCGTGGAAAGACGCGGGCACGGTAAT 1828130 30 100.0 37 .............................. TTCCGTACGCGCATCAAGCCGATTGCACACCACGACA 1828063 30 100.0 39 .............................. CGGGGTTGGCCGGCTGCGGGCGCTATGGGCGATGCATAC 1827994 30 100.0 37 .............................. CTTTCCGCCTTTCGCGAGGCCAACGGACATGTTCACG 1827927 30 100.0 37 .............................. AACCTCGCAAGTGCCGCGCAAGTAGACCTAGGCCAAT 1827860 30 100.0 36 .............................. GTTTCCTCCTGTTTTTCGCTCACACTATATATGCGC 1827794 30 100.0 34 .............................. GAAGCACGCCGTTTCAAATGTTGCGCCGAAGCCA 1827730 30 100.0 36 .............................. GCGACCTCCGCTTTCAGTTCTTCTATCCGGTGGTAG 1827664 30 100.0 35 .............................. TCGGATGTTTTTTTGCGGTACATTGTTCGGCTTTT 1827599 30 100.0 40 .............................. AGGGTCAAAGCGATCGTACAAACGCAATGTTGGTCGAGGG 1827529 30 100.0 39 .............................. ATCAACAACTCTTTCAATTCAGCTTTTTTCATGGTAAAT 1827460 30 100.0 35 .............................. GGCGTAGTCGTAATCATGACTTGCGGACTATCTCC 1827395 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =========================================== ================== 49 30 100.0 37 GCTTTGATCTTACCTATGAGGAATTGAAAC # Left flank : CACTACGGTTGTGAGCACGAACGTATTCCGCCGAACACACCGAATAAAAATGCCCATATTGAGGCGTTTCATCGGATCGTTGAGGACGAATGCTTCAACAAGTATTCCTTTGAGACGTACGAGGAAGCATATCGTACCGTCATAGGCTTTATGGACTTTTATAACAACCGCCGCATACACGGTAGTATTGGGGACATGAGCCCCGCGCAGTTTTTCCATGCGCATCAAACATCTTCGTTGCGCACGAAAGCCGTTCGACTCTGATCCTTCCCTTTCGTCTTCCAAGCCAACAGCCGCTGTAAGACGTGACGTCAAGGGCGAGCGAAAGCGAGGGCGTAGCCTTTACCCTTGACGGAAGGTCTGAAGCGACTACACTTCTATTGACGAAAGGAAGCGAGAACCAGAGATAACGTGAGCTTGTAGTTATGTATGTCCAGTTTTAAGGGGTTTATCCGAATTGAAACCGTCGATGAGTGCTGACTTACGGATGTGGGTCGGGG # Right flank : TGTCGAGCAGGATACATTTCCTCAGTAGTTTCACCTGCAGGGATAAACTGCCCGCTAATGCACCAGGCTTTTTTTGTAAAGTCTTAAGTACATGGGCGAGCTCAAGGTGCCATCGATGGTTGCCGCCTAAACGCTCGTGGTCAGCCACGCATTGCTAACGTGTTACGCTCCGTTTGGCGTACGAACCGACGAACTGTACTGTAACTGATGTCCACCCCCTCCGCCATTAACGCTTCAAACATGTCCACGACTGTCTTTTGCTGGTTGACTTGTCCTTTGTGGCGCTTCTCTCGGTTTTCTTGAAGAAACTCACGAATCCTTTGCTCGATCGCTGGCGTTAGTTTGCGTCTGGAAAGAGACCGATTGGATAACGGGTTTCTCCGTAAGAGATTCAATGAGCGCGTCAATATTTGGGGAGTTGTCTTGTTCTAGCAAAATTCTTTCGCTTCTGCTCATATTCGTGTACGTATTTACTGACTGTCTCCCGATGGATACCCACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTGATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 5 1834802-1832156 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKVB010000009.1 Numidum massiliense isolate MGYG-HGUT-01510, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1834801 30 100.0 37 .............................. TTGGATGCCGGTAGTGGTGATGGTCACCTTTCTGGTT 1834734 30 100.0 35 .............................. GTCGAAAACCCACTCCTCGAATTTTTCTGCGGCAG 1834669 30 100.0 39 .............................. TACGACCACATGAAAGTGAATGTCGGGTACGGGTACCGC 1834600 30 100.0 38 .............................. ACGTTTACGAAGCCATAGAACAGGCGATGACGTGGGAA 1834532 30 100.0 38 .............................. CACAGGGGAGACCACGGGCAACGACGGCAAACGGACAC 1834464 30 100.0 36 .............................. CAAACCAACAAGGGGAACGGGAGACAGACTTTGTCC 1834398 30 100.0 38 .............................. CTATCCTCATCATTCGCCTTTTCTTTCGCGTCCCTTAC 1834330 30 100.0 37 .............................. GGAACGCATGGAGTGGGCGCGACGGCTGGAAGAGATC 1834263 30 100.0 40 .............................. TTCGCGAAACGAGCTCGACAACAAATACGAGTTCATCACG 1834193 30 100.0 40 .............................. AGAAGGAAATTGCGAAGGATTTTCTTGGCGACAATATCGG 1834123 30 100.0 37 .............................. CTCGTACGCTTGCATCATTGCCTGTGCCGTTCTGCGG 1834056 30 100.0 38 .............................. ATGAACTGGAGTAAGGAGAACATAAAAACTGCTGAAGA 1833988 30 100.0 38 .............................. CCGGTCATATCGCCGAGTTCTCCCTGTCTCCTCGATGA 1833920 30 100.0 38 .............................. CTCAGAAGGAGGGAAAAACATGTCTCTTCTAGGTGACC 1833852 30 100.0 39 .............................. CTCGTACCATAGACCCTGAGCTTTCGGGTTTTTGTCCTT 1833783 30 100.0 37 .............................. CAGTGTTCAAAAGTTCTACAGCGAGAAACCGCGGGTG 1833716 30 100.0 36 .............................. ATCCCCGCCGTATTTCCGTTCGTGGTTGGACTAGTA 1833650 30 100.0 36 .............................. CGGCGTACAAACGCGAGTTGGCCGACGCGGTCAAAG 1833584 30 100.0 39 .............................. TTCGATGAACTCCTCGCGGTCGACATCGGCGGGTAGCGA 1833515 30 100.0 36 .............................. CTCGCCATCGTGAAGCGGCTGAAAGAGAATGAGGGC 1833449 30 100.0 35 .............................. TCGCGAACACTGGTTGTCAATGGGGAGCGTTCAAT 1833384 30 100.0 37 .............................. TCCTCTATTGAACACGCCATAGGGTCTATCATTTTTA 1833317 30 100.0 38 .............................. TCGATTGCCAAGGCAGCGAAACGTGGCGACGAGATGGC 1833249 30 100.0 37 .............................. GTTGATTGGTGTGTGGAACGGTTTGAGATGCGCTGGA 1833182 30 100.0 35 .............................. TTGGAACGCCACTTCAAACAATCCGGTCGCTGCGA 1833117 30 100.0 36 .............................. CGCGACATGGCTGATGCACGAAAAAGTCCGTTTCGA 1833051 30 100.0 36 .............................. TCGCTTTGATGCGCCGCATCATCAACGGCAGCATTG 1832985 30 100.0 37 .............................. TACGCTCAGAGATCAAGACGCCGAAGCAAGCGGATAC 1832918 30 100.0 35 .............................. CAGGTTAGACCGCGTTCCGGCGTGTCGTTGAAAAC 1832853 30 100.0 38 .............................. GCACTTTCGTTTCCTATCGTTTTTGGACGTAACTTCCA 1832785 30 100.0 35 .............................. ATAACTTTTATAAGCAGGGCTTGCAGGTTAAGGGA 1832720 30 100.0 39 .............................. CAGCGTATACCTCCGACCGCTCACCTCGATAACGGTTGG 1832651 30 100.0 35 .............................. TGCGGCTTGTATCCGCTGACGGCCACGTGCGGGAC 1832586 30 100.0 37 .............................. TTGATTCGCGAACGGTCTATCGACCGCGAGGTTAAAT 1832519 30 100.0 35 .............................. GACATTGGCCAAGATGAAATTAGGCAGTCCCTTAA 1832454 30 100.0 38 .............................. TTGAACGCGCGATCCGCAACGCCAAGACGGAGCTGAAA 1832386 30 100.0 35 .............................. GACCACGCTTTGAGTAGCGCTTTGAACGGCGCTAA 1832321 30 100.0 36 .............................. GAAGGTATGTATCTCGATGTGATCCTTGTACACTTT 1832255 30 100.0 40 .............................. AGGTACAACAGCATTTCCTAGCGCTCTAATTCGGTCCACC 1832185 30 86.7 0 .........................CT.TT | ========== ====== ====== ====== ============================== ======================================== ================== 40 30 99.7 37 GCTTTGATCTTACCTATGAGGAATTGAAAC # Left flank : AAGATGCAGTTTTTGTGGTGTCGGGTTTTAAGAGGCAAGTAGGCGACACATGCCAAGTATAGCATATGTGTTTTTGGGGATGTATGAACGTTTTGGGGCGGTTTGGGGAGGGGAGTGGGGGGGCGAAATATGTTATTGCCGGGAGGGTACACCGGGCCGCCGTCCGGTTTCTAGTGTTATATTATTTGTGTTAAATTGGTTAGGTTTTTTGTGTTGCCTTTGTGTAAGGTGGTATTTACAATGAAGTTGAATTAATAATTTGGAAGGGTCGGTTTGGTGCGCAAATCGGTTTTCGTTAGCTGGTTGCTTTTTTGTCGTCGACCTCCTATAGCGTTGTAACCCCGGGAGATCGACGACAATATGAGAAGGGGAGGGTTTGGGAGGATAGAGGAGTAAGGGGAAGGTAGGATTGTGTTTTGTAATGGTTTCAGTTAGATGGGTAGGTTGTTTGTCGTGTGATCCATAATGTATACTTAGTAGCACTAGCAAGGTTTTTTTGG # Right flank : AAGCCCCTATAGTAACTTGGACATCACTAAACACTTTAAGTTATACTAGTGATGAAAGGGGCAGAATCAAATGAAACGCCGTCAGTTCACCAAGGAATTTAAAATCCAAGTCGCAAAGGAAGCCATGGAGGTTGGTAACCAAGCGCTAGTTGCTCGCCGCTATGATCTCGGTTCTAACTTGCTTAACCGATGGGTTCGCGAATATAAGGACGGGCACTACGGGGACGTCCCGATCGAATCCGCCCAACCACGCGAATTCAGTGATCTTGCTCAGGAAAATGATCAGCTAAAACGGTTGTTGGGCGAAAAGGATTTAGAAATTGCCATTTTGCGTGATCTTGTAAAAAAGCAGCACCCTCACTTGCTGAAAAGATTGAAGTAGCGGACAAGTGGATTTCTAAGGGATACCCGATCCAAACCGTTTTACGGATTGTCCACGTACCGCGTTCCACCTATTACTATCAGAAACACTATCGGGTGAAGGAGAAGAAAGTAAGTGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTGATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //