Array 1 106836-105875 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RKMZ01000002.1 Enterococcus faecalis strain LIT2 A36' 2968_2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
    106835	    37	  97.3	    29	....................................G	CCCGTAATCATCGAGGTGATGAAAAGTAT	
    106769	    37	 100.0	    29	.....................................	CACACGCATGCAAGTGTACTGCTTGCTGC	
    106703	    37	  97.3	    29	....................................C	TAACCACATTTGAAGAAGTCTATAACCTT	
    106637	    37	  97.3	    29	....................................A	TTGACCCATTCTTGATAATCAAGAATGGA	
    106571	    37	 100.0	    29	.....................................	TTTTTTCAGTTGGTGTTTCAGGTACAATG	
    106505	    37	 100.0	    29	.....................................	TCATATTGTGTTTCTGAAATGAAATAACT	
    106439	    37	 100.0	    29	.....................................	GTTCAGTAATATCATAATCCCATTTAACT	
    106373	    37	 100.0	    29	.....................................	TTATTTTTAACCCAGTCGGCTGCGTTTCC	
    106307	    37	  97.3	    29	....................................A	TCTCTCCTAATGGAAATCCTTATGATGGA	
    106241	    37	  97.3	    29	....................................G	TGCAACTGCAGCTTCTGATGCATTTCCCA	
    106175	    37	  97.3	    29	....................................A	TTTTCTTAATATCCTGCTCCATAGCCACT	
    106109	    37	 100.0	    29	.....................................	CCGCCTATGATTACATCGCCTAGAACGTT	
    106043	    37	  97.3	    29	....................................G	AAAAGCAGTTCGAGCGGAAACTGCGACCA	
    105977	    37	  94.6	    29	....................G...............G	ACTTACAAAAGACTGTGATTTACGTTATA	
    105911	    37	  97.3	     0	....................................A	|                            	
==========	======	======	======	=====================================	=============================	==================
        15	    37	  98.2	    29	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT	                             	       

# Left flank :   CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG
# Right flank :  AACTTTTTTGATTTGGCTTTTTCTCCCCTGTTTTATAGTCATGTTGTTAAAAAACAAACTATCACCTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTTGGAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAAT

# Questionable array : NO	 Score: 5.80
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//