Array 1 1636-4141 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRD01000039.1 Rhodobacter sp. TJ_12 scaffold0039, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================ ================== 1636 32 100.0 36 ................................ ATTTCTATATCGGCGGGCAGTTCTTTGACGGCGTTT 1704 32 100.0 34 ................................ GATCAGCACATCAGCGTGGCAAGGCGCGCCGGGC 1770 32 100.0 35 ................................ CCAACCCAACAGGAGGCCCGCAATGGATGATCAAA 1837 32 100.0 36 ................................ CCGATGTATCTGAACGACGCCACGATCTGCGCGGCT 1905 32 100.0 34 ................................ TATCTATGAGCCTGTGTGGCTTAAAAACGTCGTT 1971 32 100.0 35 ................................ TTTGGGACAGCCTGCACGGCCCCGGCGCATGGGAC 2038 32 100.0 36 ................................ TGGACATGTGCTTTGGCTTGGACGGGCGGGGGAACC 2106 32 100.0 34 ................................ GCGCCCCTCAAGCAGCGCCCGCACCATTGGCCCT 2172 32 100.0 35 ................................ ATTGCCGCGCCTCCTGCCGAGGCCGACGCGGCCAT 2239 32 100.0 35 ................................ AGCGTGCGAGGGCTCGCATCCGCTGGTCAGCAAAT 2306 32 100.0 34 ................................ TGGCAAAAGACCGCCTCACCAATGAGGCGTGCTT 2372 32 100.0 35 ................................ CCCTCCCCTGCGGTGCCTGCGGGCCGGATTAAATC 2439 32 100.0 35 ................................ GTTCCACTCGCGCCCATCAAGCAGGCGGCCAGCAC 2506 32 100.0 34 ................................ CCAGAAGCGGTTTCCCGCCCGGAACTGGCCTGTT 2572 32 100.0 34 ................................ ACCTTGCGCCCTATGTCGCGTTCCGTGGCCCCCT 2638 32 100.0 35 ................................ TCTAGCCTCCCCTCGATCTTGGCCAACCGCTCGCG 2705 32 100.0 35 ................................ AATCTTGGAACTGACGTTGTCGAGCACGGGGGAGG 2772 32 100.0 35 ................................ ACTGCTTGCCCGCGCGACACGCCCTCTACAAGATC 2839 32 100.0 34 ................................ AATCTAAGCCTGCCCGCGCTCAACAGATGACTGG 2905 32 100.0 34 ................................ CCGCTATTCTTGGCGGCTTGGCTGTGTGGGTCGC 2971 32 100.0 35 ................................ GGGTAACAATCAGGCTGTGGCCGATGCGATCGCGC 3038 32 100.0 35 ................................ TTGGGCAGAAACTGTCTTTTTCTTGCCGAAAAGAC 3105 32 100.0 34 ................................ ATGGTAAACACCTCATAAGAGGCGCTTACGTATC 3171 32 100.0 34 ................................ GCGGCAAAAGCCAAGTCAACCATAGACGCCACGC 3237 32 100.0 44 ................................ TTTGATGACAAAGGTAATGGATTGGCTGACACAGGTCAGAAAGC 3313 32 100.0 35 ................................ AGCTTGATTGACATGATCCACGCAGTCTTGAAAAA 3380 32 100.0 33 ................................ AAAGTTGCGTGTTTTCCGGCGGCGATCTTGGCA C [3411] 3446 32 100.0 33 ................................ GTTCGGTGCAGATCGACCCGACTGACGCGCTTG C [3477] 3512 32 100.0 34 ................................ AGCACCACATTGCCAGCGCCGCCGATGTAAAGGC 3578 32 100.0 34 ................................ TTTGTGCAGGCGAGCAAGGCGACCGAAACGGGCG C [3609] 3645 32 96.9 34 ....T........................... GATGTAGGCAGCGGCGTTGGCAAGCTTGGCTTCA 3711 32 96.9 34 ....T........................... GATGTAGGCAGCGGCGTTGGCGAACTTGGCTGCT 3777 32 96.9 34 ....T........................... TTTCCCCTATCCGAAGTTCCGCCACGGTGGACGT 3843 32 96.9 33 ....T........................... AATGACTTACCGAATACAAACAGGCGCCAAGTC 3908 32 96.9 36 ....T........................... ACCTCACATGCCGGGGGCGACGGCACCGTAATCGAC 3976 32 96.9 35 ....T........................... GCGGCACTATGGGACGATTGCCTGCCGAGGTGCGC 4043 32 96.9 35 ....T........................... TGCGAAGGCTGCGACGACGGTGATGGATATGGCAA 4110 32 87.5 0 ....T.......................GC.T | ========== ====== ====== ====== ================================ ============================================ ================== 38 32 99.1 35 GTCGCCCCCCTCGCGGGGGCGTGGATCGAAAC # Left flank : TCGACGCCTATCCGCCCTGGTTCTGGAGTTGAGATGCTGGTTCTGGTCACCTACGATGTGAACACGCTCGAGGAGGGCGGCAAAAAGCGGCTGCGCCGCGTGGCGAAAGCCTGCGAGGATTTCGGCCAGCGGGTGCAGTTCTCGGTCTTCGAGATCGAGGTGGACCCGGCTCAATGGGTGAAGCTCAAGGCGCGGCTGGAAGCGGTCATCCGGCCGGAGTTCGACAGTTTGCGGTATTATTATCTAGGGTCGAACTGGGAGCGGAAGGTCGAGCATGTGGGGGCGAAGCCTGCGCTGGATCTGAATGGCCCGTTGATCCTCTGATCTGCGAACCCCAAGGGTGTGGCCGTTTCCCACCCGGTTCGCACCGCGCCAGCTCTTTGAAATCGTGAAGGAAGTTCCGGTGTGCCTTGCGCCACGGCTGCGGTGGCGCTTGCGACAAGCACCTTCGCACCACCGGAGCGATTTACACCGTCTGGTCTGCGGGTTACGGATCGGGC # Right flank : TGGTCGCGCAGGAGGTCACGGAGCAGGGGCGCGGGCAGAGCGTTGCGCAGGCCATGGCGGAGACATTCGCGAGAGAAGGTGCCGCATGTCCGGAGCTGGGTGAGGGAGGGGCTTACGCGTTCGTTTAGCTGCAGGTCATGTTGACAAACACATAGGTCAGGTCTGGGGAACGGACATGACTGAGACGATCACCGCAGCCGAGGGCTGCACCTCTGCACGTGGTCATAGTTACGCGGCGTACCGTCGTGTGCGAAGGTTCAACGCTCGGGAGAGTGTAAAACAGTGTTGTGATCCTGCCCCCGCAACCATAGAATCCGACACCCCGCCTACGCCAAGGCGGGCTTTTGCTTTCGAAACCTCCCCCAAAGACAAAATCGATCCCAACTCCCCATAAAGTTCAATCACATGACCGCCCGGCGCTCCCGCGTCAGCATGAAGGCGGATCTCCGAAATCAGACCCCGTAGAAGAGCGATCGCATCAGGACGTGTCGCGTCATCGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.50,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //