Array 1 67132-70572 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGHW01000052.1 Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1519 Contig052, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 67132 28 100.0 33 ............................ TGATTTGGCATTCTGGACTGGCAAGGACCCAGA 67193 28 100.0 33 ............................ TGATGTTATTTCTGAATATGTGTTTTAATTTGA 67254 28 100.0 33 ............................ CCAGCGCAATTCCGCCAGCGTCTACCTGGTCAA 67315 28 100.0 33 ............................ TTGAAGACCCAAGAGTAAGACAGCTATTGGAAA 67376 28 100.0 33 ............................ CTTCATTTTCTTAGGCTTTCCTATTGGGTAGGT 67437 28 100.0 33 ............................ TGCAAGCCTTTGGCAAGCCTTTTTTATATTTTT 67498 28 100.0 33 ............................ TCATCAGAGCAGGCCTCTACAACTATGAGGTTG 67559 28 100.0 33 ............................ TAATAATGCTGTTGGTCAACGGGGAGTAGCCTA 67620 28 100.0 33 ............................ TGACTCCTTCTTTTTCTTCTTCGGTCAAGTCGA 67681 28 100.0 33 ............................ CATGTTTCCGTTGGAAATACAAGACTTTTTAGA 67742 28 100.0 33 ............................ TCATCGCTTTCCTAGACAAACCGCACTGCACTA 67803 28 100.0 33 ............................ CAGGGTGGTGAACTTGCGCACTTCGATCACACA 67864 28 100.0 33 ............................ TGGAAAGCGAAGCGTTCGCCGAAGAGCTAAAGG 67925 28 100.0 33 ............................ CACCTTTCCGTCGGTAGTGCAAGCCTTTGGCAA 67986 28 100.0 33 ............................ TCTTTGCTTGAAGATTATCCACACTATGATGAA 68047 28 100.0 33 ............................ CGATGAGGAGGTCCGGGACGAAATTGCGGCCGC 68108 28 100.0 33 ............................ CCCGGCCGCACGGGGCTACGGAATTATTACAGA 68169 28 100.0 33 ............................ TAAAAGACTTCACAGAACTGTATCTTCTTGCAC 68230 28 100.0 33 ............................ CCCGTCCCAAATGAATTCGCCAATTTCACGCGT 68291 28 100.0 34 ............................ TTTAAAGACTACGTTACCCGCGAAATTGGAAACT 68353 28 100.0 33 ............................ CCACGGGGACGACTTCGGGGAATGGACTTCAGA 68414 28 100.0 33 ............................ CGAGTATAATTAAGAGCGTAAGGAAAAAGCCCA 68475 28 100.0 33 ............................ TTCGGGAGCTGGTAGCAGAGCGACATAAGCTTC 68536 28 100.0 33 ............................ TGATGAAGTATTGGATTTCTGCCAATTAGAAAA 68597 28 100.0 33 ............................ TTGTATTGCTAGTAATCATGTTGCCAGTAAGGG 68658 28 100.0 33 ............................ TGCTGTCAGTGTTTCGGTGGTTTACGATATAGG 68719 28 100.0 33 ............................ TCTTGTTTGTAGACAAAAAGATTGATATGGCCT 68780 28 100.0 33 ............................ CAATCTGCCCATTAACTACCTGCGCAATGGTCG 68841 28 100.0 33 ............................ TCGCCGTCTGAGAAGCCATCGCCATTCATTTCA 68902 28 100.0 33 ............................ TGACTGGCTATCCTCTCTGGTTGGTCCTAAAGG 68963 28 100.0 33 ............................ TTAACCAGCAACAGAAGGCCCAGGCGGCCGTTA 69024 28 100.0 33 ............................ TACTTAGGTAAGCCTATTGAAGGGCCTGTTAAA 69085 28 100.0 33 ............................ CTGGAAGCTGGAAGCATGATCCAGTTGGAACTG 69146 28 100.0 33 ............................ CATGCTTTAAGTTTGATAAAGGCATCGATTACT 69207 28 100.0 33 ............................ TGGGCAGATTGTTGCGGCGATTAATACGAATTC 69268 28 100.0 33 ............................ CTATGACATGCACGATTATCGCATGCTTTACTG 69329 28 100.0 33 ............................ TCAAAGCCGTACTGCGTCAAATCAATCCGATAA 69390 28 100.0 33 ............................ CCACGGCGACGACTTCGGCAACTGGACTTCGGA 69451 28 100.0 33 ............................ TCTACAAGCCTTTTTATTTAAGGAGCAGTCATG 69512 28 100.0 33 ............................ TAATGACTACTGAACAAGAATTTAAGAAAAACT 69573 28 100.0 33 ............................ TTAAGATCCCCAGCAAGTAAGATTTTTAGATAA 69634 28 100.0 33 ............................ TTTTCTTGCGCATGAGAGAGCTGACACTCCAGG 69695 28 100.0 33 ............................ TAAACGCCGGGCGCAAAATTCCCTATAGCGTCA 69756 28 100.0 33 ............................ TGAGCCAACCTACGCAAAGTCCGGACTGACTGG 69817 28 100.0 33 ............................ TTTGGTTTAATAGCAATGCTTGATTGTTTGCGG 69878 28 100.0 33 ............................ TTGCATTCTAGCAAGAAAAATATTTGCGTCGGT 69939 28 100.0 33 ............................ TAGTGAATTGGATTTTTGGCGGGTCGGTTTTGA 70000 28 100.0 33 ............................ TTCCGGACAAACTCCGGACAAATTGGGCTGAAA 70061 28 100.0 33 ............................ TTAGGCAAGATGCCCCGTAAAAATTGCCGTCAG 70122 28 100.0 33 ............................ CGGCCTTGACGGCTTCGCAACTGTTACCGTCAA 70183 28 100.0 33 ............................ TTTCTGCTATGAATCCGGTTTGACCGACTAAAA 70244 28 100.0 33 ............................ CTTACGGTAGATCAGACGATACTGACAGCCAGG 70305 28 96.4 33 ..................A......... TGTTCTTGCCCAGAATGATAAACTCCTGCCCGA 70366 28 100.0 150 ............................ TGGGGGGCGTAGTACACCCCACTGTTATAGATCTATTTTACTTAATCGGCTGTGATCTCACTGCCATTAGTGAGTAACATGGGGCGAAACAATATTCCTCACGTATGTGAGGAGAATTCTTTCTTTATGCTATTGTGTTTTTCGTACTGT 70544 28 78.6 0 ...........AT.T.C....A.....A | T [70550] ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 55 28 99.5 35 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGACTGAATACCGAAACTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATCACTTCTGAAATGCTAAGTAAGGAATGCGTTCCATTGCAAGATGCATTGGAAGAACTGACTGACTTTGTTGGAAATGTACCAATTGTTGGGTACAATTTTAGATTTGATTCTGCATTTTTGAATAGGGATTATCGGAAATGCGGGATGCAAGAATTGAAAAATGAGATCAAGGATTTACTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAACGCTGTGTCTGATGCGAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTCTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : ATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGATAGAGTAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGAAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAAGCGAAGAAAGCATGGCGCAAAAGTGCGAGAGAAAAGGTTTGCCGCTGACGACAGAGTCTGCATTGATCGAAAACCGGGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATACCACTTGATCATGGAAGTAGTCACTCCCTTTGAAGACGTCCATGGCAACAAGCCTGGCACC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //