Array 1 5277-3547 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSWU01000004.1 Corynebacterium diphtheriae bv. mitis strain 4010 Contig_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5276 28 75.0 25 TCA..CA............A.....C.. GGCGGTCCAGTTCTCAAAGTCCCTG T [5251] Deletion [5224] 5222 28 85.7 33 ..........C...GAC........... CAATACATGAGGATTGACAGTGCTGATTATGAC 5161 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 5100 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 5039 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 4978 28 96.4 33 ..........C................. CTGGGGTCCCAGAGGGCGTCATCGCTCGTGTTG 4917 28 100.0 33 ............................ TTTTGAGCAACCCGCGCCGCGGCGCGGGCAAGG 4856 28 96.4 33 ..........C................. TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 4795 28 100.0 33 ............................ TAGCCATCATTCTCTCCTAGGGCCTCTGAAAGG 4734 28 100.0 33 ............................ TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 4673 28 100.0 33 ............................ ACGGGACCTATGCGGGCATTGATTACACCATCC 4612 28 100.0 33 ............................ ATTTGCGAAACCACCTCTATCTTCGGGACAGCG 4551 28 100.0 33 ............................ TGTTTTATTTTCCGCTCGTGCTTCAGCAACTAG 4490 28 100.0 34 ............................ CATAGGACTTCCCCTTCGAGTACATCCCCGCTGG 4428 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 4367 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 4306 28 100.0 33 ............................ GGGTTTTCATTGCTTTTATGCTGGGTGTGGCTA 4245 28 100.0 33 ............................ TCTGTAGGATTCTGCCCCTTTTCGCAGAAACAG 4184 28 96.4 33 .....................A...... GCGCCGCTGTCGTCAAGGTCGGCGATGAGGGTG 4123 28 100.0 33 ............................ GGCCTGTGATCACGTAGAGCATTCCCCACCTCC 4062 28 100.0 33 ............................ CCGTTGAGCGAGTGCACGATGTCGGCCCATAGC 4001 28 100.0 33 ............................ AAACGGGACGCTGTGACGGCGGGGCAGCATTCT 3940 28 100.0 33 ............................ AAATACACAGTGGAACCGAATCCAAGATCGTGG 3879 28 100.0 33 ............................ ATCATGTGAAGGTGATGGTCGAATGAGTGCCGG 3818 28 100.0 33 ............................ AGCTCGGCAGCAAGCAGCGGTCATGGGTGCGAC 3757 28 100.0 33 ............................ TGTCATCGCGTCCTGCCTAGTCCGCTAACTTCG 3696 28 100.0 33 ............................ TTCATGGGTGTATCCCCTCCTTCCCCCATGAGG 3635 28 100.0 33 ............................ GCAGCGAGGCGAGGGCGATACCAGCACTTATTG 3574 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 29 28 97.9 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //