Array 1 4667-5382 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000014.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 4667 32 96.9 39 ...........C.................... AGTCCATAGCTCAGTGTTCCACATAATTATTTACCTCCT 4738 32 96.9 36 .......................A........ TACCCGCGCCGCTCAGGATTGTCGGGTACTCAGCTA 4806 32 96.9 35 ...................T............ TGGATAAAATTGAACGCAATTCATCAGCTATTGGT 4873 32 93.8 40 ...................A.........G.. TAGACCTCCGAAGTGTTTTGGGTTTTGCTATCCATGGTCG 4945 30 87.5 36 ...T.........C...........--..... TAGTGACAGAAACAATGACGATTAGTGGATTAGGAT 5011 32 87.5 36 .....C..AC..........T........... TAGTGATACACTAAACATTATGTTAAGTTCCATAGA 5079 32 100.0 36 ................................ GTTTCGTTTAGTTTGTATTAGTAGTCTTGCAGCATT 5147 32 90.6 35 .................A..........T..T CTCCGGCCATAATTAGCCCACCACCCTTGATTTAA G [5175] 5215 32 87.5 36 ......T.TCT..................... TCAGCAAGTGTTGAAGGCTATCCAGCCCTCTGTATA 5283 32 87.5 36 .........C.C.C..............T... CTAACAATAGGTTGACCTTACCTCTGCTTTGATTAA 5351 32 93.8 0 .............A..............A... | ========== ====== ====== ====== ================================ ======================================== ================== 11 32 92.6 37 GTCGCACTCTGTATGGAGTGCGTGGATTGAAA # Left flank : TAAAGCGTTGGGAGCGTTAAGCTCGTAGGTAGCCCGACTAACATGACTATGCTTGCCTATGATCTGTTGTGGCGTCTAAGCGATACAAAAGTGGGTGGATCACGGTCAGTGAGTGCGGAATTCGGTGTTTAAATGTATACTTGATGCTAAGTAGTTCAGGCGCGTAAGATAAGAATAGGAAGAATTAATGGATAAAATAGACCGATAGCCTTGATTCTATACATTTAGGCGATATTTACAAAAGCAGAGTCCAACTTGTAGACACCAAAGATTCCTATGATATGGGTGATCCATTACTATACTGTAGCAGGTGCGAATGCCAAGCTCACATGATTTTCCCGGGGGATTCGCACCTCAAAATTTGTCGAATAGACCCATTTTATGACCTTTTGGCGATGAAATATTATCAAAGTTGTTCGAGTAATGGAATCAAAGTAGTTAACATACCGAAAATACGTTATTATCATTTGTGTATTAGAGATGATACGTCTTTTTTCGCT # Right flank : ATCCGTATCTAGGAAAGTATCTTTAGTGAAATTTTGAAGCACTCCATATGTAGTGCTTCGGGTTAATTACAAACGGCTTGCCGTTAGTTTTGTAATCTTTGATCTACATCAGAATTGGAGCATCGTATGAATAGACAAGCACCTATTTTTCGCTGAATTCCTCTCGTTACTTAATCGACTTGAAATGGAAACGACACGTTTGTCCGCATTTCTGGGTTCTACGCTTCATGGTGTGACAGGAGTGGGCTAACTCGATATGTGGAATCTGATACGTATGTATTCGATAATCGCCGATTGGATGGAGCTTCACAAGATATCGTCAACCCTTATATCATTGAGCTATCTCGGACAGAGCCGATTTATTATAAAGGTGATCCATTATGCTTTAAGCTCATCTTGATCGGAGATGCCGTTCGTTACGATAATTATATCGTGGCTTCCTTGACTCAGGCTCATTGTTTAGGAATTGGAGCGGAGCGTAAGGCGTTCGAACAGTCAGG # Questionable array : NO Score: 6.59 # Score Detail : 1:0, 2:3, 3:3, 4:0.63, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 2 15292-15454 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000014.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 15292 32 100.0 38 ................................ CGCTTGTAGAGGTCGATACCGTATTGGATGGACATCAC 15362 32 90.6 29 ....C......T.......C............ ATTGCCGAGTCCATCATGTCTTGGTCCAT 15423 32 62.5 0 TC...GTCGCA.TA..A..C............ | ========== ====== ====== ====== ================================ ====================================== ================== 3 32 84.4 34 GTCGAACTCTGCATGAGTGAGTGGATTGAAAT # Left flank : AAATATATACTACTGCCTCAGAGGAATCTGCAGAGAGTATATTGAGTAATATGACGGAAAAGGAAAAGTTGATTTTTAGAATCAAGTATTTATCGTCTTCGGTACAAGATATTGGAGTGAGTAAGAGGGAAATCTATCTCCAAATTATTGAGTCCAATGATACTGAAGCTGCACAAGCTTTGAAGAATTATTGGACAGAGATTGGAGAATGGGTTACTTCAACGAAGAAAAAAGGTTCTGGTAAACAAGCTGATAAATGTAAGGCCATTCAAATGATGCTTTTACCGAATTAGAACTGTTTATCCTGAGGTGCGAACCCCAAGCTCACATGATTTTCCCGGGAAATTCGCACCTTGAAATTTGTCGAAAACGTCAATTTTGTGAACTTTTGGAAACAATTTTTTTGTTAAAATGATTTGAGTAATGGTTATAAAGAAGTTTTAATAGCGAAAAGACGCACGTATCTTCTCATTAGATTAGGTAATTACGTTGTTTTCGCT # Right flank : TTATCCCTCCTATGTTATAAATTCAGTACAGCCAACGTCGCACTCCATATGTAGTGCTTCGGGTTAATTACAAATAGCTTGCCGTTAGTTTTGTAATCTTTTATCTACATCAGAATTGGAGTATCGTATGAATAGACAAGTACCTATTTTTTCGTTGGAATACCTCCCGTTACTCATTCGACTTGAATGTAAGGAAACGACACGTTTACCCGCATTTCTCGGCTCTACGCTTCATGGTGTGACTGGTTGGGCGCTAACTCGGCATTCTGAATCCTATAGGTATATATTCGAGAATCGCCGATGGGGTGGTGCTGCACAGGATATCGTCAACCCTTATATCATTGAACCACCCCGGCCAAAACCAGTTTATGATAAGGGTGATGCGTTATGCTTCAAGCTCATCTTGATCGGAGATGCGGTTCGTTACGCCAAGGATATCGCGACTTCGTTGACTCAGGCACAAACATTTGGAATCGGAGCCGAACGTAAGGCATTCGAAC # Questionable array : NO Score: 6.39 # Score Detail : 1:0, 2:3, 3:3, 4:0.22, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACTCTGCATGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 148926-149905 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 148926 33 93.9 35 .........T...T................... AAACCCTAAGCTGCAACCAACTATCGTTGATGCAT 148994 33 93.9 33 .........T...T................... TCGCTACACTCTTGATGATCCGTAGTTCCTTAC 149060 33 97.0 33 ..........T...................... ATATCATCCGGCCTATAGTAAGGAAGGAGCAGG 149126 33 100.0 33 ................................. ATTGCTCCAAGCTTATCCAGCATCGAGGGGTAT 149192 33 100.0 35 ................................. CGCCTGAATACCAGGAATAAACCCGCGAGACGCAG 149260 33 100.0 34 ................................. TATGAACGCACATTCCAATTCAAATTGCTTTGGC 149327 33 100.0 35 ................................. TTTTAAAACCCTATCAGGACGCACGACCAAATGGA 149395 33 100.0 37 ................................. GGTAAACGGCTGCAGTCGTTGATGATGATTATTTCAA 149465 33 100.0 34 ................................. ACAGACAATGCACGTCTGGAGACTTACCGAAATG 149532 33 100.0 35 ................................. CCTTAACGCTTTGGTGGAATCAAACAAGGAAGAAG 149600 33 100.0 35 ................................. GTATTCGACGCGGTAAACGGCTTGGGTAAAATCGG 149668 33 100.0 35 ................................. CGTATTACCCGGCGCATATTTTTTTGTTAACCGGT 149736 33 93.9 35 .............T......A............ TTGATAATCGTAAACAGTATGAAGATGGCGAAGGA 149804 33 93.9 36 .........T...T................... CTAAACATGCTCCTTAATAAAAAAAACCATGGGGTA 149873 33 97.0 0 .........T....................... | ========== ====== ====== ====== ================================= ===================================== ================== 15 33 98.0 35 GTCGCACTCCGTACGGAGTGCGTGGATTGAAAT # Left flank : AATTACAGGGTTTATTTCACATCCTTCCTGATGTTTTAAATGAGGAAAGTACGACAGTCGTTTATGAATCTCTGCTGCCACAAACAGAGGTATCGGAGGACATAAAAAGGAAGCACTTGGAATTTGTCCAACATCGTAAAGATGCGTAGTGTAAAGTTGAATCAACTTGAATCCAGTTGCGAAGGATTCACGTGATGGGTTCCAAGGTATGAAATAGTATGCGGAGAGGAAGTATGCTTTTTATTGTTTGGCTCTAGGGAAGCTATGTTATAAGCTATTTCGATAATCGCCAGGTAGAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGAGATTCGCACCTCGAAATTTGTCGAAATCTTCAATTTTGTGACCTTTTGGTAACAAGAATATTGAGTTTATATACTGTTGTGGGATATAGTGGAGCTATTATGTGGAAAAAGTATCGGAAATACGTATTCAGGTATTTTAAACATAACTTGATACGTGTATTTCCGCT # Right flank : TAAACCACCGATGATTAGTCGCCTAATCTTCTGCAACAATTGGGCGTTTTGATTCTGCTCGGAACGTTGGTGGACGGGGGCAAGTATTACAGAACCTGTGCTTTATGGTAATTGTCAAAGCATCAGTGAACTGGTGTTTCTGATTTATTGATGGTTCCCCCAGAACAAGACTAACGAACAGGTCTTCGCTCGGAGAGCTTGGCTTTTGGTCTTCAACAAGGATGCCTTCTTCCGCTTTGTTCTATTTGAGGATGGGGAGCATTATTCCTCAACGATAAAATTCATCCACAGAATTATTCAGAACAAGGATACGGTCGTTCAGTTCTTGCCAGTAATTATAATTGCTAAAAGAAGGTGTTTTCTTCCAATCCAAAGTATTCTTCGCTAAAAGCTGATTTAGTAGGTATATTTTTAACTGTACTATCTCCTTTAATGTAAGGTTTGTAAGGTATTTACTATGAATATATTTGAGAGCCGGGTAGCAAGTATCGACACTTTTT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTACGGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 2 152455-153024 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 152455 33 100.0 33 ................................. CATCAAAATAAGTAACATTTCTATTGACGGTTA 152521 33 100.0 35 ................................. GGATTGACAGGTGCATCGGATTGGATGGAGTGCTC 152589 33 100.0 34 ................................. AGGTAAGTTTGACGTTCCACATTTGCCGCATAGC 152656 33 100.0 34 ................................. CTCCAAAACAACGTTTAATTTTTCTGTTCTGTCT 152723 33 100.0 36 ................................. AGAAAACAAGATGATGCTTATCGGGTCGATAGTCTC 152792 33 100.0 35 ................................. ACAACTGAAGCGCCTGTCTGATATCGACACAGAGG 152860 33 97.0 34 ...........................C..... TCGTCCTGGTTAATGCCGAGTATTGAGTTACGAT 152927 33 81.8 32 A........T...........AA.....A...C TGTACATTGATAGTATCTCTAGTAAAATTTTT 152992 32 75.8 0 .A........A....T..C..C...G..-..T. | C [153015] ========== ====== ====== ====== ================================= ==================================== ================== 9 33 95.0 34 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : TCTTTTTTATTTCTTCTTCTGATAGTTTAAAAGTCTACAATAATGCCAACCCTTGTTAACAAAACGATAGGGGAGCTGGCTTATTGTGAGAAAAAAAACACTTATAAAACCTGCAGGTAATCATAAACCTAACACCACAGTGCCCAACTGGGGAATTAAAAAGATATTAGACCAAAATAAAAAAGTATTGGATCTCCTCAAGAAACGAAAATGAGAAACTTGTAGGACGGAGGGTATAGTTCATCCTTGATCCAGTGGTAGTAATGAATTGCGAAATGCCATGAAGTCAGCTGAAGCAGGTGCGAACCCTAAGCACACATGATTTCCCTGGGAGATTCGCACCTCGAAATTTGTCGAAATCTTCAGTTTTATGACCTTTTGGCAACAAGGATATTGAGTTTATATGCTGTTGTGGGATATAGTGGAGCTAATATGTAGAAAAAGTATCGGAAATACGTATTAAGGGATTATAAACATAACTTAATACGTGTATTTCCGCT # Right flank : TCCGAATGGCTTGCCGTTAGTTTTGTGATCTTTGATCTATATCGGTATCGTATAAATAGACAAACACCTATTTTTTCGCTAGAATACCTCCCGTTACTTATTCGACTTAAATGTAAGGAAACGACACGTTTGCCCGCATTTCCCGGCTCTACGCTTTATGGGGTGATTGGTTGGGCGCTAACTCGGCATTCGGAATCCTATAGGTATCTATTCGAGAATCGCTGATGGGGTGGGCTGCACAGGATATAGTCAACCCTTATATCATTGAACCACCTCGGCCAAGGCATTTTATGATAAAGGTGATGCATTATGCTTCAAGCTCATCTTGATCGGCGATGCGGTTCGTTACGCCAAGAATATTGCGGCTTCGTTGACCCAGGCACAGACAGGTGGTATCGGAGCCTAACGTAAGGCGTTCGAACTAACAGACATTTTTCATGCAGATCAGTATGGACCCATTTGGAAACAGGGGTACTTTGAGATGAACAGAGCTATACCTG # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 3 161073-161512 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 161073 33 100.0 35 ................................. AGTGCTTCAGCTACATGTTTTTTGGCTTCTTTGCC 161141 33 100.0 36 ................................. AAGAAAGAGGCTATTCAACTACCTTACTAACTTGCA 161210 33 100.0 34 ................................. CGCAGTATATGTCAAGGGAGTTCCTTTGATGCCA 161277 33 97.0 36 .........C....................... CTTAGCTAGTGCAATCACCAATCTAAATCATCCCCA 161346 33 84.8 34 .....C...C..G...........A.C...... AGTCTTTCATGTTCGCATATGTAATGGGCACCTT C [161378] 161414 32 93.9 34 ...........G..-.................. ATTCTGAGATAGTCCACGTCGAAAATGGCCTTAT 161480 33 97.0 0 ....................T............ | ========== ====== ====== ====== ================================= ==================================== ================== 7 33 96.1 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GGAGACGATTAATGCATTCACATGTAAATGCAAAAATTCCTTGGGGTCTTGAACCACATACCCAAGCTTTATTGTTGGAAAGACAATTCGTGTGAATAAGGATAATATACTTCGATGCTCTGGAAGTAGGTGTAATGATTGTATTTCGGTATGTTGTAAGCATGAGAGACATTGGGCTATCAAAGTGGTAAAAAGAGTGTAGATTACGGATAGCGAGTACAAAAATTGGTGTTTGAATGTTTACTAGAAGCTGCCAGTTTGGACGACTCAGATTCGAACTGGAATGGGTTATCCATTAATACTTCAACTGGTGCGAATGCCAAGCTCACATGATTTTCCTAGGAGATTCGCACCTCGAAAATTGTCGAAAACGTCTGGTTTTGACCTTTTGGTAACGATTTCATGTTAAAGTGATTTGAGTAATGGTTATAAAGAAGTTGTAATAGCGAAAAGACGTATATATCTTCTCATTAAATAGGGGGATTACGTTGTTTTTCGCT # Right flank : TAATTCCAATAATTCTACTATACTCGGCTGCTTGAGGTCGCACTCTGTGTGAGTGCAATAGATAAAATAGAGTAAAGGGAGTTATCCATTTGCGAATAAGATGGAACATTATGAAATAGAAGTGAGGGAGTATGCATATGCATGCGGTAGTGACAATATTATTCGGTTAGTAGGTATAGGTATCAAGACGATTACTATTTCGAAGACACAACTATCTTGACCAGAATAAACTATCCTACTTACAAATAAACCTACCTAGTGAACGTAACTTATATAGTACCTAGAGCAATCCAACAAAAATTTTCCGAAGCATCTGATGAAGTAAGTAAACTTGTATCAGAAGTTCATGGATTATGCTTTAGAGCCTTATAAAGAAGAGATGTTTCATTATGGATACGGAGACGTAACGTAATCAGATGAAGAGTTATGAAAAGAACTCTTAACTTATAAAGAGCCTTTGTACAGGACTTTTATTCACTTTTGATGTAACCAACAGTGTT # Questionable array : NO Score: 8.91 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 4 169850-170356 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 169850 33 100.0 35 ................................. ACTACAAAGGTCATTGAACGTCTTGTGTTCGTCTC 169918 33 100.0 35 ................................. ATCAAAAAGGAACGACTAGGTAAGTTTTGTGAAAC 169986 33 100.0 35 ................................. TGGATCAGCAGGGTCTGGATATTCGAAATACGGTT 170054 33 100.0 35 ................................. ATTCTATGGTCTGCACCTCACCCTACCATATATAG 170122 33 100.0 34 ................................. TCTTATTGGCTTCTTTCCCATCAGCTCTATTTGC 170189 33 100.0 35 ................................. CTCAATAATCCGTGCATCCAGTGTCTTCTGCATTT 170257 33 100.0 34 ................................. ATTTCTTCTGGCACTGGCTCATTGTGAATCACAG 170324 33 87.9 0 ....T......C.....T............G.. | ========== ====== ====== ====== ================================= =================================== ================== 8 33 98.5 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GGTGGATTGGAGCGGCATGCTGGGTTCACTAACGTTTGAGGGGGAGTTGTCTCCATTTATCCCTTGGCTGAACGCTGCTCGTATTTTACATATCGGAAGGAACTCCACGTTTGGTTGTGGACAGATCGATGTAGTCTACAGGTCGATATAATGTGAAAAGTCTTGTCCAATTAAACAGGATTTTGATGTGAGTGAGTAATATGATGTGGGCTATGAATCTTGTAGGACGGAGTGTATCGTTCATCCTTAATCCAGTGGTAGTAATGAATTGCGAAATGCCATGAAGTCAGCTGAAGGAGGTGCGAACCCGAAGCTCACATGAATTCCCAGGAAGATTCGCACCTCGAAATTTGTCGAAATATTCAGTTTTATGACCTTTTGGCAACAAGAATATTGAGTTTTTATGCTGTTGTGGGATATAGTGGAGCTAATATGCGGAAAAAATATCGGAAATACGTATTAAGGGATTATAAATATAACTTAATACGTGTATTTCCGCT # Right flank : TAACCATATAACACAGCGAAAGGTTGTGCTCCATCATCCTTCGAATAGCTGCTGATACACCCTTGTACACTCCTGTGAACTAGTTTTAACAATTGATACCGTGGTTTATGTAATATGGGAGGTTTTAAACATGAGTAACCTAGTAACTTTTTCTTCCAAAAAACGTTGACGCCTAGCTGGTCTGAAAGAAAGAATACAAAATAGGTTGGGCATAAAATTTGAACGAGTACATGAATCGTACTCGGAAACGCAAGCCAAAATAGATCGAGCAATGTTGAAAGAAACCATGCATGTGACATCTCAGAGCTAATGCAGCTCTACTTCACATAAATAGGGGTACAACGAAATGGAAAACTCTTAAACGTGGATATGCATCCTGGACCGAGGTGCCGAAATCCAACACACAGTTTCAACGCCGGAACCAGGAGCTATTGTGCATGGTAGACACATGGTTGTGAACCTGCATGATCAGGGACAACCTGATTTGAAGCCCGGCAGTG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 5 174665-174832 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 174665 33 100.0 35 ................................. TGATCCGCCTGAACTACGTGGATACCTGGTTGGAG 174733 33 100.0 34 ................................. ATGTCGAACAGCCCCTTTTAATATGCGCTTATGT 174800 33 75.8 0 .....................CG.C..CTCTT. | ========== ====== ====== ====== ================================= =================================== ================== 3 33 91.9 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : ACTTACGATTTTTGGAAGATATTGAAACCTGGTTATTGAGAGCTCTTGGGAGTTCTTAATGAAACAATGGATTCAAGTTCTATTCTAAAAACATATTCAAATGTGAACGAACCTGAATGGAAATCAATTCCCCCTTTGGATTTCGGATAGAGAGGCAGAAGAGTGGAAACAAGCCGACCCTCTTGCTCAAATCAAATGGACCCAAGAAAAAAACAAATCTTGTAATCGTCATAATGGGTATCTCATCATTGATCCAGTGGTAGAATGAATTGCGAAATGCCATGAAGTCATCTGAAGCAGGTGCGAACCCTATGCTCACATGAAATCCCTGGGAGATTCGCACCTCAAAATTTGTCGAAAACGTCCTTTTCGTGACCTTTTGGCAACGAAGATCTGGAATGGATACTGATATTCATAATAAAGATAGATGTTACTTGATAAAGAATGCGGAAATACGTAATATGGATAGGGAAATAAAACATGGATACGCTTTTTTCGCT # Right flank : TTACAAAGTATGTATTGTGAAAGCACCCTTGGGAAGAAACAGAGAAACGTATCACTCACCGTGAGAGGAACAAGTAGTAACTAAGAATGAGTCCATATATTAAAAGAAGAAAAGCAACACAGATCAGTATACTGGAGGGCTTGAAGGTAGAAGGTAATGCCTTGCTAACAAAACAATCTACAATTGAATTAACTTTATGTTAATCAACAACCCCAAAATTCTGACCCATGTTCAGAATAGGACTAAAACTAGATCAATTAAAATAAATCATTCAGGGCTATTAAAGCTCGCTTTACGCGATTAGCGGAGAGCGGGTTTTTCGTGTTTTGTAAAATAATGTAGAATCCTCTCGAAATAAAAGGGAATATAGCCCAGCATAGAGAAAGAATAACACGTGAGATGTAAGTCTTCAGAATCATTTTATGGGCCTGAGGTCTGGCTATGTGAAACATGTGGAAGCTGTATAGCAGAGATAGAAAAGGGAGGTAGAGAAATCGTGG # Questionable array : NO Score: 7.96 # Score Detail : 1:0, 2:3, 3:3, 4:0.60, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 6 184060-184565 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 184060 33 100.0 33 ................................. CTATGCAACGCAAAAAGGCCCCGCCGATATTGG 184126 33 100.0 35 ................................. ATCAATTATGATCTGGAATATTTATTACTTTATAT 184194 33 93.9 34 ....C...............C............ TGGATGGGTACGATCTGTCGAAGCGACAGGTTAA 184261 33 90.9 35 ....C.....T.........C............ TTGCGAGTCATTGGCTGTATGGCCGACGGTACCCG 184329 33 90.9 35 ....C.......G.......C............ CTGACCGCTCTCAGATCATCGTTCCAGTCGTTTGA 184397 33 93.9 35 ....C...............T............ ATTGATATGTCGGCCAAAGCGGCCAACGCCTATCT 184465 33 87.9 35 A...C......T........C............ CTCTGGTTTGTCATAAAAATCAAAACCGTATATCA 184533 32 69.7 0 ....C..A..AT...T....CC...G..-..T. | C [184555] ========== ====== ====== ====== ================================= =================================== ================== 8 33 90.9 35 GTCGAACTCCGCATGGAGTGAGTGGATTGAAAT # Left flank : GTAGTTTCGAGTCACTGGTGATTGAACCGTTCAAGGCAGCGGAAGTTGAGCCTGCTGCCTTTGTAAAGGCATATAGTGAATTGATGAAGAGTGATTCTATCTTGAAACGAGTTGATATCAAGAGGTATGTTCAAAGTAAATTGGAAAGAGAGTTTGAAGCTTCTGATAGAAACCATGTGAACTGGAGTAATATGAATGAAGTGAGAGCAAATTTAGGCGAGAAGCAAAGTGGAGGTGGATATCCGACTGATTGGGTTTTGAAGTCTACGGTAGAGTAGTTTTAATGGCCAAAGTATGAGGTGCGAAACTCAAGCTCACATGATTTTCCTGGGGGATTCGCACCTCAAAAATTGTCGAAAACACCAATTTTGATACCTTTTGGCAAAATAACGGTTGAGTTTATATGTTGTTGTGGGATATAGTGGAGCTAATATGTGGAAAAAGTATCGGAAATACGTATTAAGGTGTACTAAATATAAATTAATACGTCTTTTTTCGCT # Right flank : TACAGATAGCTTGCCGTTAGTTTTGTAATCTTTGATCTACATCAGAATTGGAGTATCGTATGAATAGACAAGCACCTATTTTTTCGCTAGAATACCTCCCGTTACTTATTCGACTTAAATGTAAGGAAACGACACGTTTGCCCGCATTTCTCGGCTCTACGCTTCATGGTGTGACTGGTTGGGCGCTAACTCGGCATTCGGAATCCTATAGGTATATATTCGAGAATCGCCGATGGGGTGGGGCTGCACAGGATATCGTCAACCCTTATATCATTGAGCCACCCCGGCCAAAGGCATTCTATGATAAAGGTGATGCGTTATGCTTCAAGCTCATCTTGATCGGAGATGCGGTTCGTTACGCCAAGGATATCACGACGTCGTTGACCCAGGCACAGACATTTGGAATTGGAGCCGAACGTAAGGCATTCGAACTAACAGACATTTTTCATGCAGATCAGTACGGACCCATTTGGAAACAGGGACAATTCGAGATGAACGCA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:0, 3:3, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACTCCGCATGGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 7 187930-188766 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 187930 33 100.0 35 ................................. CATGGGTACTCGTTCGCATCGATGTACCCAGGGAT 187998 33 100.0 33 ................................. GGATAAATGCCTGCTGTCTGCTCTGGGATACGA 188064 33 100.0 34 ................................. TGCCCTTTAATGTGAAATATTTAATTAATTGCGT 188131 33 100.0 35 ................................. CAGTTAAAATTACGGTCCCTCTTGATGCGTTTGAT 188199 33 100.0 35 ................................. TTGTAGGTGACTTTAGCACCCAATGATTCAGGTAC 188267 33 93.9 34 ........T.........T.............. GCATAGTTGGGGTTCGTAGCGTAACCAGCTTTTT 188334 32 90.9 35 .........T.....-..T.............. TTGTACAACGGAATATCATCATGACGAATGATGGT 188401 33 90.9 33 ....T....T........T.............. CAAGAATACGTCCGTGGATCTGGACAGCAGCAC 188467 33 93.9 35 .........T........T.............. TCGATGGCAAACTCACGGAACCATCCAGATGTAAG 188535 33 66.7 27 ..............ATG..TT...A..CAT.GA CCGCACAGCAAGCGAAGACCTTGGTTT AAA [188557] Deletion [188595] 188598 33 87.9 35 ....T...........G.T..C........... GTCCAAGTCAATGCCAACGCTTTGGTTTTCATTTG 188666 33 97.0 35 ..................T.............. TTCGAGGAAGTTCATAGAAACCACCGCGCTAGGAG 188734 33 97.0 0 ..................T.............. | ========== ====== ====== ====== ================================= =================================== ================== 13 33 93.7 34 GTCGCACTCCGTATGGAGAGCGTGGATTGAAAT # Left flank : TGGGATATAGTGGAGCTAATATGTGGAAAAAGTATTGGAAGTACGTATTAAGGAATTCTAAACATAACTTGATACGTGTATTTCCGCTGTCGCACTCCGTATGTAGTGCGTGGATTGAAATCAGCAAGTGTTGAAGGCTATCCAGCCCTCTGTGTAGTCGCACTCCATACGGAGTGCGTGGATTGAAATACACATTTATTAGTGATTTTAGTTTTGTCAGCAAAGTCGCACTCGTATGGAGTGCGTGCGGTGATCTGGATGAATATCCTCCGTTTCTTATGATAAGGTTGATCTATTCATACTGCAGCAGGTGCGAATGCCAAGCTCACATGATTTTCCTGGGGGATTTGCACCTCAGAAGTTGTCGAATTGGCCCATTTTGTGACCTTTTGGCAATGATTTAGGGTTGGAAATTTGTGATAACCGTTTTAACTAAGTAGAAATATCGAAAATACGTTAATAGTTATTCTTGAAACATAGTTATTACGTCACTTTTTGCT # Right flank : TGTTACGTCCAGGGTCAGCCCGGAACCATCAGCGGTCGCACTCCGTATGGAGCGACAAGTCATCTTTTTATGGGGCTAAAAAGAAAAGCTACGAGATTTTTCTCAGACAAAGTATGTATATGGAAGTAACCCTTGGGCAGAAACATAAAACTGTATCACTCACCGTGAGAGGAACAAGTAATGGCTTAGAATGATTCCTGGAGAGCGTGGATTGAAAATGCTAAATTGTCATTGTGAAGTTTTGTTACAAAAGGCGAATCCTTTAAGAGGGCGTGCAGGTTATCATTAGAATAGAATTGTGAAGTACATAAATTAGAGGACACAAAAGAATATATGGTTTACTATCCTTTTAAGAAATCAAGGAGGAAAACATGTGATAAATGGATCTTATTTAGATGAGTCTGGAAATAATAGATTTGGAGTTATGCAACAACAGCCTGTAATTGTTATGGTGGGATTTTAGTTCGTTATACAGCTTGAACGGGATTTTGAAGCGCTGT # Questionable array : NO Score: 8.56 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 8 198468-198833 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 198468 33 100.0 35 ................................. CACAGCTACGTTAAAACTCGTCTATACAAGCCCTA 198536 33 100.0 35 ................................. AGTGTTCAAAATGGTGCTGACGCATTACTTAATGT 198604 33 100.0 36 ................................. ACCATTACCCAGTGGGTGATATTATGAATCCAGAAC 198673 32 90.9 29 .........C....-......T........... CTCGATATACCCAACCGATGAACCAGTTG 198734 32 84.8 35 ........T..C..-A.......A......... CATACAACTAAAAAAACACCCCGAAGGGTGTCCGT 198801 33 90.9 0 ...T.......C........A............ | ========== ====== ====== ====== ================================= ==================================== ================== 6 33 94.4 34 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GAAGTAGGTGTGATGATTGCTTATTTTGATTACGTATGATGTGAGCACGATAGATAGTGAAGGCCGAAGAAGACTATCTAAAGTGGCGAAAAAGTGTGTGGATCACGGTCAGCGAGTGCAGAACTCGGTGTTTGAATGTATACTGGATGCTGCCCAATTTAGACGATTAAGATTCGAACTAGAAGAATTGATTGATAAGGATACAGATAGTCTTCGATTTTATAACTTAGGTGATAATTACAAAAGTAAAGTTCAACATGTAGGTGCCAAAGATTCCTATGATATGGGCGATCCGTTAATACTCTAGCAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGGTATTCGCACCTCGAAATTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATGGTCGAAAGTTTGTGATAACCGGTTTAAAGTAGTGGAAATATCGGAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : TTTTCTATATCGATGTCATTCTTATTTATTGGAACCCTCTTAACACGTTATAAAAAAATAGACCAATAAATAATAGAGATTTTCAGAAGAAAATATTTGAGAGCATATGGACCTTTAGGCAATATGAATTAGAGCAATTGAATAAGGCTTGTAAGTATAGAAGAAAGAACCTCGTTAGGCATGTTATATCCCTAGTGAGGTTCAGATAAGTGAAAGTTATTGAGGGTGACTGATCTCCGTCAACTATTCATTAATCTTATTATTTCTCCTTTGATCAAATTGTTTTAAGGTAGTTTCTCTTTTTGCACGGTTATCTTTAAAAATTTGCTCTTGATCTTTATGGACCACTTTTTGAGGTTTTTTCAAAAAGGGTAAGATTTTATTCGTTTTCATTATGTACTATCCTCCACATATGAGATTCTAGTAACATCATTTCTTTTCTATGCTACTTTTAAACCTTTAAAATTGAAATTAAGCGCCTTCGAGATCATATAACACGA # Questionable array : NO Score: 8.98 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 9 200099-200864 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 200099 32 100.0 33 ................................ AACTCATACGCTTGGTAATTTTTCTGGAACTCA 200164 32 100.0 35 ................................ ACTGGGAAAGCCGCCAACCCTTTACGGATTCGCGG 200231 32 100.0 33 ................................ ACTCTTCCCATGTGATCACCCCAGGCGTTTGCC 200296 32 100.0 34 ................................ TGTGCAATCTGTAGCTTCATAGCCTGGTCGCCTG 200362 32 100.0 35 ................................ ACACCATCACCCTGTCCTGGCGGCATACGATCCTC 200429 32 100.0 35 ................................ TATGATGAGCGCAGATGAAGTTGAACTCTTATGTA 200496 32 100.0 35 ................................ TTTTGCTAGTTGTTGAATTGCGTACATGTTTGTTG G [200511] 200564 32 96.9 36 .............T.................. GGAAATGCATTAATAACTTCTTGTCTTGTCAAAGTC G [200579] 200633 32 81.2 35 ...AT.........T.T..T....C....... TAAGTCCAGTATAGCCAATAGAGCTGCCTTACAAC T [200646] 200701 31 75.0 34 ..TA..G....C.A.GA-.............. TCTTTAAACTTGGCGTACCTAGTCTAGGTGTATA 200766 32 84.4 34 A........C...T......A.T......... ATAGGCGGTACAGATGCTGAAGGAACGATATACG G [200781] 200833 32 68.8 0 ........T....T.G..T..A.....TTTTA | ========== ====== ====== ====== ================================ ==================================== ================== 12 32 92.2 35 GTCGCACTCTGTACGAGTGCGTGGATTGAAAT # Left flank : ATAGAAATTATATAATGTAAACTAAAGAAAGAAATTAGCCGATATAACATCGTTATAGTAAAAAGCTTATAAATACCATTATACACTTAAAGATAACATGAAGGATAAACTTAAAGGTCTATTTATCGGCATGGTGGTCACTGGCGAACGGCGTTTCTTTGATGGATATTTCATTTGAACTGGAAGAATTAATTGACAAGGATACTGATAGTCTTCGATTCTATAATTTTGGCGATAAATACAAAAGTAAAGTCCAACATGTGGGTGCTAAAGATCCTATGATATTGGCGAGCCGTTAATACTTTAGCAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGGGATTCGCACCTCGAAACTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTAGGGTTGGAAATTTATGATAACCGTTTTAAAGAAGTAGAAATATCGAAAATACGTTAATAGTTATTCTTGAAACGCGGTTATTACGTCACTTTTCGCT # Right flank : AACGTTTTCTTTCTCATTACTTCGAGTTGTCCTAATGAGAGAGTACACAAATTTCCTTATTTAGTCTTTTTTTCTGCACATTGATTCCCAATATATCACTTACGTAATCTTTAATAATGTGCTGAATGCTTCTACTAACATTTGTGCGTTGCTAGGAGATTTAAGCGAACAACTTCTTGATTTACTAAATTTGTTGCTCACTGACCACGAAACCTACTAAACTGCTCATTGGGAGTTTGGTTGGTTGAACAAGAGGCATGATACGAGAAGTTAATTACTTGGTTTGTGCTCAAAACCTGCAAAGAGTAATCCTTTGAACACTAGGGATATTCATTTAACCGGACAAACTTATGATCAATTCATGCAGTTAAATTATTGGCTTAATTAGTAACTCATTTATGAAATTATTGATGTACTTCAATTCTGATAAGTGTCCTAACCTCTTGCCGCTTGATTAAAAAGACGAAAATTACTTTCGATGACACACATTTCTATTCTTG # Questionable array : NO Score: 8.97 # Score Detail : 1:0, 2:3, 3:3, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTACGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.61%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 10 431411-432187 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 431411 33 100.0 34 ................................. ATCACGGTGCATCAACTTTAGGAGGTTGTCTATG 431478 33 100.0 35 ................................. TTTAGCTTCTGGAGAGCGCTCCAGCGTGGATCATG 431546 33 100.0 35 ................................. TTTAGCTTCTGGAGAGCGCTCCAGCGTGGATCATG 431614 33 100.0 33 ................................. CTTCACACTTGAGCTTACAAGAGCAAACGCGTC 431680 33 100.0 35 ................................. CAGCATGACGGTTGTCGCCATTGGCCCCACCTTTT 431748 33 100.0 35 ................................. ATATGTGAAAACCCACCCCAAGCTTGTCTAACACT 431816 33 100.0 34 ................................. CATGCCCAGGTAAGTCAACCAGTACTACAGCATG 431883 33 100.0 35 ................................. TGCTCCAATTACGCCAGAACCAACGCCTACATTAA 431951 33 100.0 35 ................................. TCGTGTCGTCATCGGTGGTACTCCCTCTCCCGTAA 432019 33 100.0 35 ................................. AGGTTGTCCATGATACCCGCGTTAACCACACCGGG 432087 33 100.0 35 ................................. TCGCCCACGTATTCGATGGTGCAGTCTCTAATCTT 432155 33 84.8 0 .........CA...........C....C...T. | ========== ====== ====== ====== ================================= =================================== ================== 12 33 98.7 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : TTGAAGAAGAAAAGAGCTATGGCAACCGTAAATGTTCCCTTGAACGCAATTCGTGAATACAAACCTTATGCTGGTAAGGCATAAATAGGTTGATGCCTGCATGAAATTTGCTTTGAACGCTTTGATTTTTGGTATAATGGAAGTGAATATAGAATGGAGTTGCTGTTATGGATTTGCTTGATCCCAGAGTAGATTTTGTCTTCAAACGTATCTTTGGCAGTGAAAATAATAAAGACGTATTACTGGCATTTCTGAATCGAGTCCTTACTGAAGCAGGAGATCCAGCACTTACAGAGATCATTTTAACAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGGGATTCGCACCTCGAATTCTGTCGAAAAGCTCTAATTCATGACCTTTTGGCAATGAATTAGAGCACGAAAACTAGAGGTAATCATTGTATAGTAGTAGAGATGCTGAAAATACGTTAATATCTGTTTATGGAGCATAGTTATTACGTCACTTTTCGCT # Right flank : TGATGCAGTCAGGACAACAAATAACAAGGCGATGAGTCATGACTAGTCCTCCTCAAGTGTAAGTGTAAATATTAAGAGCTTTCGCAATTTCAATAGAACAAAAAATATTCTTGTCTCGTGATAAGAACATAGTCCCATTGAAGTTTGTGAAGGAACTAATGGGGCATTCTTCGATTGAAACAACCATGATTTATACGCACGTTAATGATGAACAAAAGAAAAGGACTATGGCTACTGTAAATGTTCCCTTAAACACAATTGGTGAATACAAACCTTATGCTGGCCAGGCATCAATAGGTCGATGCCTCCATGAAATTTGCCTTGAACGCTTTAATTTTTGGTATAATGGAAGTGGATATAGAATGGAGATGCTGTTATGGATTTGCTTGATCCCAGAGTAGATTTTGTCTTCAAACGTATCTTTGGCAGTGAGAATAATAAAGACGTATTACTGGCATTTCTGAATCGAGTCCTTACTGAAGCGGGAGATCCACCACTTA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 11 586988-586688 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZN01000003.1 Paenibacillus sp. CF095, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 586987 32 100.0 36 ................................ AGACCGTGCTGCCGGAATAACTTGGCTGCCATTCGG 586919 32 100.0 33 ................................ CTTTGTGTTTGTTGTCAGTTCGGTGGTTTCTTC 586854 32 100.0 36 ................................ AGTTTGCAACGGCGCGTTATCGTCAAGATCGTTATC 586786 32 100.0 35 ................................ GAACTCATCCTGCGAAGGCTCGTCTGCCTTCCCGG 586719 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 100.0 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ACAACGTTGACTGAACGTTCTAGTGGATATGTCGATTCGGATTTGGCTACGAATGTTGTGGAACGTGCAGGTGACGTCCGCATCATCTCCTCAGCGTTGTATTTGAACCAGGTGCATCGATACTCCAATCAAAAAAAGAGTCCCTTCACTGGAGCGGATTGCTGGGCGCTTTGACGTGCAAAAGTGGGTTATCGCCATTCATCCCTTGGCTATACGCCGCACGGGTTTTACACATCGGAAGAAATTCGACTTTTGGCTACGGACAAATTGATGTAATATATAGATAAGATTTTCTGGTGACGTTAGCTTATACGTGTGAGGTGCGAACCCCAAGCTCACATGATTTCCCTGGGGGATTCGCACCTCAGAATTTGTCGAAAACATATTTTTTGTGACCTTTTGGCAATGATCTTTCTTCATTATTAGATAAGTTCATATGAAAAGAATGGTTTTACGTAGTGGATTTTCTTGATCACATCGTTTTTGCGCTATTTTTCGCT # Right flank : TTAAAATCGATATTGCCGTTGTGATGTGATACGTCAAGTCGCACTCTAGACACCCCTGAACATGAAAGCCATCAAACGGGGAGTATAATGGATATAAGGAATTCGGGGTTGACGGCAGATGAAGAGAAAAAGTTTCTGGAGATATGCAGTGAGAACGCTCAAGTAAAAAAAGTATTGCACTTTCATATAGAAATAGGATAGTTCATTTGTGAAATGCAAAAGAGGCTAGTATGAAATACCTCTATAACAAATTAATAGTTCACTCCTTTAGAAGGTTTAAGAACAATTTCTTTAAACAGCATTTTTACAATTTGTAATTCCTATGATTGAGCACGTATCATTTTATGAATTGGTATCTTTCTTCCATTAGTTGCTTCAACATTCCGCGTGAAGAAGGTAAGGGAAAGAGGTCGAGTCCATTTATAAAAAAGTAGGAATTGATATTGTTCCAAATTTTCTTTGTAACAGATGAACATAATGGCTAAGGTTGTTATCCACAG # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //