Array 1 179516-177022 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGDO01000035.1 Bacteroides fragilis str. 3397 T14 gbf3397T14.contig.34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 179515 35 100.0 33 ................................... ATCCTTTGTTTATTATAATTTCGATTATTAACC 179447 35 100.0 37 ................................... TATTCTTTGATGCCGTGATTTATCACACGATTAAACC 179375 35 100.0 36 ................................... AGTAAAAAATTCCTAAAAACAGAACTATGGAAAATT 179304 35 100.0 37 ................................... CCACGATTTATGTCGAGGTCGTAAAGAGAGAAGGAAT 179232 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 179163 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 179094 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 179025 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 178956 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 178887 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 178818 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 178749 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 178680 35 100.0 37 ................................... TAAAAAATTAACTCCGTATTTGGGAAATGCCAAAACG 178608 35 100.0 34 ................................... AACCTTATCCAAGAAAAAAGAAATCGCTGCTGGT 178539 35 100.0 37 ................................... TTCCTATTTCGGCAACGTTCAATTGAAGTGGGAACTT 178467 35 100.0 36 ................................... AGAAAATAAGGAGCGAATTGCAGAGGTTGGCTGAAA 178396 35 100.0 36 ................................... ATATTTTGACGTGGATTTGGAATGCAATCATATGGA 178325 35 100.0 38 ................................... GCAGCTTAATAGAAAATGTGAATGATCTTGGTTTTGAT 178252 35 100.0 35 ................................... TTCAGTCGGTATCAAATGGAGATTAAAATCCAAAT 178182 35 100.0 36 ................................... TTTGCGAGACGAGATAAAGAAATTTATTAATCAGGT 178111 35 100.0 34 ................................... AAACTACAATATCGTTCTAGCTGCAAGCGTAAGC 178042 35 100.0 37 ................................... AAATCAGTACAGCTAAAAATTGAGCTAAAACTGGTTT 177970 35 100.0 37 ................................... TTCATTCTCCGTGGGGAATATTTATATCACTATACGG 177898 35 100.0 35 ................................... ATATATAATGCTGATTGTAGCGATAGCTATGATCG 177828 35 100.0 34 ................................... TTTCTCCGAGTAGCGCAATCAAAGCCCTAAACAA 177759 35 100.0 35 ................................... AGGCCTTGAAACAAAAACAAGCCGCTTGTTCACAC 177689 35 100.0 32 ................................... ATTGCTGAGTTTAGCGCTGGATACTGCCATGT 177622 35 100.0 36 ................................... ATAGATTTCACATACGGCAATACCGCTGACGCAGTT 177551 35 100.0 34 ................................... ACAATACTTACAATTATGACAACTTCAGTTAAAA 177482 35 100.0 37 ................................... ACTACACTGTCTGAAGACGGTATCGTTGATTTCCACT 177410 35 100.0 37 ................................... AACAAATATCAATGCGCAAGAAAATACCGGCGCAAGT 177338 35 100.0 33 ................................... GAATTGAAGACCAGAAAGAAGCTTACAGTGTGA 177270 35 100.0 37 ................................... CGCTGATAGACGTTCAGGTTCGCACCGATGAAGTTCA 177198 35 100.0 37 ................................... CATATGATACATTTGGAAAGTTTCTCAAAATCTTTTT 177126 35 100.0 35 ................................... GATCAAGAAAACCTGCCGGAAGTTCTGTTGTTTCT 177056 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================== ================== 36 35 100.0 35 GTCTTAATCCTTATTATACTGGAATACATCTACAT # Left flank : TAATATCCAAAGCATCTACAATGTAACTTACAACACGAACAAGATGGTTGGGAGATATTTTTTCCGATAAACGAACCGGAAAAGAACATTTTGGCTGGAGGTTAACTCTCTAAATACTATCTTAACTATTACTGTTAATTTTTCACAACGGTAATATGAGGCTTTTCACCGAAATAAACAATGGTAAAAGGGGCTATCCGACTTTTGGGGGGCACTTTGCTTTTTGGACAGCCCCGTAGTATTATCGCCTTTGTGTATTTTTGGTAAGCTATTCCACAGCTTATTAAAATAGTTACCAATAAATTAGTTCTGCCTCTCTTCTTCTTTTCCTGCTTATTGATCATTTTCCCAATGTTAAAAGCAATACCGAAGTCCATGACGATCTTATCCAAGCCGTTATGTCTGAACTTCTCCCCTTATTCTATTTAATGTAGTTAAATTTTTATATTGGAATACATCTACATGCTAATAAGGAAAGTTTGCAGTATTTCTGGGCATTG # Right flank : ATATTGATAATCAGATTATTATAAAATATGTATTCTATCTGTATAAATATATAATAACTTATTATTCAGTTAGATAGATGAAGTGTTGAACTGATTTTCGCAAATGTACTCTTTTTTTCTGTAATTTAAATAAATAATTTGTAGAATATAGAGATATTTAATTGATTATCACTTTGATATGATCGATTCATTATTCGCAAATGCCTGCTTCATTTGTTATATTATAGCCTATTTCGAAAATAAGATTAATCTTATATTTATAATTATCAGATAATAAGTGTATTATGTCAAAGAACGAATTGCTTATTTGTTTTTTTTCGCAAATGATTTACTAATATACAAAAAAGCTAGTTCTTTCGTAGCTTTTATACATTATATATTATTTTTCATTTAAAAGAATAAGCAGAAAATCAATGAATTAAACAAATTCTGATTTTCGCAAGAGGTTTAGACTATTTCGACGGTTTTAATTATCTTTTTTCGTATAGGTTGATATATAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTATACTGGAATACATCTACAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //