Array 1 517533-520623 **** Predicted by CRISPRDetect 2.4 *** >NZ_JJOC02000003.1 Acinetobacter baumannii strain DSM 30011 Contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 517533 30 96.7 30 ............................A. CCTAAGCGATAAGGCACAGGTGGGGCGACA 517593 30 93.3 30 ............................AG TGAGGATTATTGGGCCTCACTAATAAATGA 517653 30 96.7 30 ............................A. TAAAACTGATTTTAATCTGAGTTGCGTTAT 517713 30 96.7 30 .............................A ATTAGGATTGGTTTTTAAGGAAGGCTTCTA 517773 30 100.0 30 .............................. TCGGATTTTTAGCGTCTCTAACTGTGGTTT 517833 30 100.0 30 .............................. ATAGACGTACAGCAAAATAACGGGGATAAA 517893 30 93.3 30 ............................AG TTTTTTGAATATTTGTTAAAACATCATACT 517953 30 96.7 30 .............................A CTTATGACCGCAAAGCTTATAAAACTAAGC 518013 30 100.0 30 .............................. GTACATTCGCTTTAAAAGATTGCCTACTAC 518073 30 96.7 30 ............................G. ATTTAGTTGCACCTCCCCGATCCGCTGGAT 518133 30 96.7 30 ............................A. AAATTGTTGAGTGGTCATCATTTGCAATGT 518193 30 100.0 30 .............................. AGTTGAAATTAAAGAACAACGTCACTTGAT 518253 30 93.3 30 ............................AA ATGATGCAATGATTTGGGTGTTCTGTTCGT 518313 30 96.7 30 .............................G TCTAGCATGAGCACCGTCATGAGGTAAGTA 518373 30 96.7 30 .............................G CTTCAATTACTTTGATCTCTGCTTGTGTCT 518433 30 93.3 30 ............................AG CTAAGTCTGGACGATAGACTTTTAGCTTTT 518493 30 96.7 30 ............................A. TAACTTTAAGATCACCGACGTTAAGCGCTG 518553 30 93.3 30 ............................GA ATACAACTTCACCGCTTGATGCATGGGCAA 518613 30 96.7 30 .............................A CTCTTTAAAAGCACTTTTAATGCTTAAAAG 518673 30 96.7 30 .............................A AGATTCAAGAAGCAGCAAAAAATAAGTTAG 518733 30 100.0 30 .............................. AAGAATCAATTCAGACTCCTTCAAGACTTC 518793 30 96.7 30 .............................A ATGGTTCAAGCTGTGCTTCAAGTCTTGCAA 518853 30 93.3 30 ............................AA CTGGAAGCCAGAACCGCCTGAACAAGGACT 518913 30 96.7 30 ............................A. CCTCCAATTCTTGTATTTGATGGAATATTC 518973 30 96.7 30 .............................C ATTGCTGAGGCAGGTATACTGTAACATAAA 519033 30 96.7 30 ............................G. ACCTTCATTATCAAGTAGCACAGGGTTAGT 519093 30 96.7 30 ............................G. CACCAAGACCCCCAGCCAGCATATCAGCCC 519153 30 100.0 30 .............................. CAGAAGTCGCTTACTTAATCAAGCGGGTTT 519213 30 96.7 30 ............................A. GTTTTGAACATCAAGAGCAGAATTACCGAT 519273 30 96.7 30 ............................A. GTGAACGAAGTGCTGCTAGAACTTCATTAA 519333 30 96.7 30 .............................A CTTTCTATTACGAGGCGCTTGGAAGTTATT 519393 30 93.3 30 ............................AG CGAATCACGCATGAAACGCAATTCTCTAAA 519453 30 93.3 30 ............................AA ACTTAGTACCTTTTAATACGCCCTTCCCTA 519513 30 100.0 30 .............................. GATCGACAAGCATGGGCGTGAAGGTGTGGC 519573 30 96.7 30 .............................G CTGAGAATCCACTCAGAACTAGAAATGGTT 519633 30 93.3 31 ............................AA AACACAAGATAAGGCAGATAAAGAGTTGCGT 519694 30 93.3 30 ............................AG AAAGATGCACTAGAAGAAATGGCATTAATT 519754 30 93.3 30 ............................AA GCTCTCATCGAAGCACGGGAAAACCTGCTA 519814 30 93.3 30 ............................AC GCGAAGCTCATTCCACCATGCACTAATATT 519874 30 100.0 30 .............................. GAAGATGCAGTAAAGCGTAAACAAGTTTTG 519934 30 96.7 30 .............................A TTTCTCGTGGTCGTGAAGCGCCACAAGCTC 519994 30 93.3 30 ............................AA AAAGTTCTGCCTGTTCACGCTGTTTAATAT 520054 30 93.3 30 ............................CG CAAGGGGCTTTTTAGTGCCTAGCTGCTCGA 520114 30 96.7 30 .............................A AAGGCGTTGCTATTGATATTAATTCACCAG 520174 30 96.7 30 .........A.................... CGGCACCACCCAGAGTAACTTTACCTTTAG 520234 30 96.7 30 ............................A. TCCACTGCAAAGCAATGAGATGAAATCGCA 520294 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 520354 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 520414 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 520474 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 520534 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 520594 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 52 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCTCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATT # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //