Array 1 56424-56096 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZYX01000003.1 Enterobacter sichuanensis strain 35699 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 56423 28 100.0 32 ............................ AAACGCAATCATAAAAGGGTATACGAGATTCC 56363 28 100.0 32 ............................ GGCCTGGTTGCAGCAAGAGTCTGGCGCCGTGT 56303 28 100.0 32 ............................ GTGGGAAAGCGCAATCAGCAGGCAAGGATCCC 56243 28 100.0 32 ............................ GTTAATGAAGGGAGTCGGCAAAGACTTCACCA 56183 28 100.0 32 ............................ CGTTTGAGAATCTTCGCCGCAAGGGCGTAAAC 56123 28 85.7 0 ..A..................AC.A... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 97.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGCGCGACGCGTTCGCTTTCATCTGGGGTCAGCGTACGGCCCGCGCTTTTGCGGCGCGCGACGTTACGCTCGTTAATCCCGGTCACGCGCAAAATGTCTGCTTTCGACATCGCCGTCCACTCGTGGATATTGTCGAGGACGCTAACGGGTAATCCCTGATTGAGATACTCGACCAACCGCATACCCCGGTTTGCCGGTAACCCCGCAAATCGCCAGAGCGCGTTATCAGCAGGCTTCTGTGCAGGAACCCATGTTCTCATTTTTACCTCCTGATGATTGTCATTTGTCATGGTTTATTATAGTCATTTGTCTGGTGTTGTGAAATGGCGGATTTTAGAACGTAGTAAAATCAGAAAAGGGAGTTATGACCCTAATTTTTCAGTTATTTATAACTCTTTGATTTTAAGTGGTAATTTCAAATGTATAAAAAGAGGGTTAAAAAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAAGGGTGTAGAGATAAGATTTCAG # Right flank : TGAAATAAACAGCATTCACATATTACCAGCCTACTACCACGTCGCCTGGCGGCGCTACGCTTGCGCAGGTCTACAATGCGTTTTGCAATTTATTGATATCAATGTGGCGTGTAGGCTGGGTAAGCGCAGCGCCACCCGGCAAGAAAGGCGACTGAATAGTTAAGGGGAGGGTTTTCCATAAATTTAAGGCCGGGACTAACCCGACCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 68021-67512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZYX01000003.1 Enterobacter sichuanensis strain 35699 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 68020 28 100.0 32 ............................ TTTGAATTCAATGAATCCAGTTCATTAAACAT 67960 28 100.0 32 ............................ TGACCATCACCCAGGGTAAATTTAAACAGTCG 67900 28 100.0 32 ............................ CTGCTGAAGACCCAAATCCTGTGCAAAGCCTT 67840 28 100.0 32 ............................ CGCAATATACGTCAGGGGTATCAGGTGTTACA 67780 28 100.0 32 ............................ CCTGACGTATATTGCGGTGCTGTATGGATCTC 67720 28 96.4 32 ..........C................. TTCAGTTCGCGTAAAGCGTTGGACACGCTAAT 67660 28 100.0 32 ............................ GCCTTAAACTGGTTAGCCTGGCCTTTCCCGGC 67600 28 100.0 33 ............................ AGTAATCTTCGACGGCGCATAGCGATATTCTGC 67539 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTCCCGCAAACCCAACCCGTTTGTCGTTGTCTTGTTGCATATCTCGAAGAAGTCAAAACTGGACTGACAGTATCCATGCGTGATTTTCAGGTGGTGGAATTTGAGGAAGAAGCGGAACAACCGCGACAAAAAGCGTGGCTCCTGGAAGACACCGAAACGAAATGCAATTACTGCCGGGCATTAAACCACGTGTTGCTGGTGTCCCATTTTGATCGTGATATGTTGCCGCACCTCGCGGGGTTACTGCACGAGATTACGCATTCGATGGCGACAGATGTGGTTGCGCCTCGTGGTGGCGAAACCGTTATCCATATTATTTGATGAGTGCGGTGGACTGCGTCGGGGAGTAACCCCGACGCTTAATCGTCAGACCCTTTTTTTGACGGTGTTTATAACTCATTGATTTAATGAGCGGCTAATTGTGGTCTGGAAAAAAGGGTTTATGGTGAAAATATTGATTATTTTCTTTTCGAACAATAAGATGGCGATGTTTCCTCTC # Right flank : GACGAGCAAAACTGAGCTCATCTATAAATGCCAAAAGACTGACGAACGCAGTAGAGAGCTTAAAAACTGATGGTTGGTGACTTTACTGCACTTGGTAACCTACACAAGTTTCGGCCTTTTTTCTGAATTTAAAGGAAATGAGACTTCTGGATTATCCTGGTGTTTGATTAAGGGATTAACCTTGCCAAATATAGGTAAGGAGAGATGACATGGACACAGTTGAAGAGTTGGGGGGCACATATTTCTATCACGGTAATGCCAACGTGACTCCACAGGAGCTATTTTTGCTCATCTTTGCGGAAGGGCTGGCAAATCATATGGGAGTGACAGTTGAGACTGCTGCAACAATTCTGGCCGGCTTACCAATCGTACCTAAGCGCAAAGTGCTCGGAGCATCTGGATCACGAACAAGCATTGCCTCGAAGGTTGCGCGCCGTATTTTGAAGGGCGCTCATTTTCCTGAGGGAGTAAGGGTAGAAACAACGATCGGAATGGGTAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //