Array 1 9759-11834 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGDYR010000024.1 Lactobacillus helveticus strain HUL 10 HUL_10_contig_24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 9759 30 100.0 36 .............................. TAGTAAGTGATAAAGATGAAGTTTACTTGCCACAAG 9825 30 100.0 35 .............................. TGCAACACCAGCATTACTTGCATCAATTACTAAGT 9890 30 100.0 37 .............................. TACCAACTTTCATATAACGGTTTTGTTTTTTATCTTC 9957 30 100.0 35 .............................. CTTTAAAAAAAGCGTCTTACATTGTTTACCATTGG 10022 30 100.0 35 .............................. TTTATAATATCCTGCGCTCTTGACTGAATTATTTC 10087 30 100.0 36 .............................. CAAAATGGTCGATCAAGGTAAAATACCTTTGATTGA 10153 30 100.0 37 .............................. TAATGAGTTGTCACTATTGCGTTTCATAAATAGAGGC 10220 30 100.0 37 .............................. TTATCCAGATGGCTACTTTGATCGTGATGCTTGTCCC 10287 30 100.0 37 .............................. ATGCCATACTTGTCGGAAACACCGTAGTACTTTTCGC 10354 30 100.0 36 .............................. TTGTGCTTTGGTAACTGGCAACGTCCACACCATAGC 10420 30 100.0 36 .............................. TTATAAATATCATCATAGGCATCAATTAGACCCTTG 10486 30 100.0 35 .............................. TCTTTTTTAACAGCGTTAATTTTATTGCGTTCAAT 10551 30 100.0 36 .............................. ACATCAATTTGAGGAGGAACAGTAGCTACATACCCT 10617 30 100.0 36 .............................. ATCAGGAAGAAAGCCCGAACACCAAACCAAGTGCCA 10683 30 100.0 35 .............................. TATTCGATGTAGTCATCATAAATACAAATGGTTGG 10748 30 100.0 35 .............................. TAGCTTCTTTTTGATACGATTGAGCTTGACATCAC 10813 30 100.0 36 .............................. CTTGGCTTACCTTGACTAACTCCGCTTCAAAAGGGC 10879 30 100.0 35 .............................. AGATTTTCCAGCTTGTGTTGGTATTAATGTATTTT 10944 30 100.0 35 .............................. TGGCTTAATTCATGCGTACTATGCACCAGATCAAG 11009 30 100.0 37 .............................. TAATGTTGTTAATACTGTTAATGGCGATGACTGGTAC 11076 30 100.0 36 .............................. AAATAAAATACACGGTAATAAGTGGAAACCACTATT 11142 30 100.0 36 .............................. ATAAAATACACGGTAATAAGTGGAAACCACTATTAG 11208 30 100.0 36 .............................. TAGCAATAATATCCACTAATTTCAAACTGCCAAACA 11274 30 100.0 36 .............................. GCATTTGAGATTTAACAACACGTGTCATACCGGGAA 11340 30 100.0 36 .............................. GAATTAATTAAGTTGTTGGTCTTTAATGAGTTGTTA 11406 30 100.0 37 .............................. TGGAATAAGTCTTTGCGGATTTCATTGGTAAGCTTAG 11473 30 100.0 36 .............................. TGTTAAAAACGCAGAAGAAGCTCACTCAATGACCGT 11539 30 100.0 36 .............................. TACTTTGGCGAGATGGGACTAACTAACATTTTAACC 11605 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 11671 30 90.0 38 ............T.............G..T TTTTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 11739 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 11805 30 73.3 0 .A......C.......G...G..AA...TT | ========== ====== ====== ====== ============================== ====================================== ================== 32 30 98.3 36 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : TGTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACAATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATGAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //