Array 1 457-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKB01000249.1 Streptomyces sp. SID2888 SID2888.c291, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 456 28 100.0 33 ............................ CCCGACGGGGCGGGTGGTGTGGGTGTAGGCGGT 395 28 100.0 33 ............................ GTCCGGCCACGCGGACCGACTGATCTGAAAAAG 334 28 100.0 33 ............................ CCGCAGGTCAGAGGCTTGCGGTTGAAATAACCG 273 28 100.0 33 ............................ CTCAGGGAGGGGACTGGCAGCAGGACCTGCTGC 212 28 100.0 33 ............................ GGTCCTGTCCAAGATCAAGGGCTGACGTGGCGA 151 28 100.0 32 ............................ GTCTACCGGAAGGACCCGAAGACCGGCCTGAA 91 28 100.0 33 ............................ TGCTCCTCGCCGACCACCGCGTCGAGCCCAACC 30 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 33 GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Left flank : C # Right flank : CCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTTGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-819 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKB01000262.1 Streptomyces sp. SID2888 SID2888.c309, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 33 ............................ CCGCCGCGGGAGCCGCCACGGACCGGTCGCTGA 62 28 100.0 33 ............................ GTCCGCGAGGGGCTCCCGTGAGCTGCTGGTCAG 123 28 100.0 33 ............................ CCCCGACACGAACCGCGCGATCGCCGACCTCCC 184 28 100.0 33 ............................ CAGGTTGATCTCCTCGGCCTCGACCCGCGCGGC 245 28 100.0 33 ............................ GCAGTTCGCCGACTACGGAGGTCGCGGCATAAA 306 28 100.0 33 ............................ TCAGGGCGCGGCCGGCGTGCTGACCGACCACGA 367 28 100.0 33 ............................ CACCATGGACATCTCCAGCGGCACCGTGGACGA 428 28 100.0 33 ............................ CATCCTGCACGACGACTCCGAGGACCCCGACGG 489 28 100.0 33 ............................ GGTCGGTGCCGTGCAGTTCCGTGCAGAGCACGG 550 28 100.0 33 ............................ CGCCAATGAGGCGATGAAGGCTGGCATCAAGCA 611 28 100.0 33 ............................ CGCAGGGATCCAGCCGATGAGGCGCATCATGTA 672 28 96.4 33 ..............T............. CCGGCACCTGACCTCCCTCGGCTCCCACTCCCG 733 28 96.4 33 ....................A....... CGAGGCATAGTCGACGATGGGGGCGGCGCTGAC 794 26 82.1 0 ..T.........--.T.........T.. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 98.2 33 GTCGTCCCCGCACCCGCGGGGGTAGCTC # Left flank : | # Right flank : CCTCGGCGGGGCGAACTGCGGCGGCTGAATCAATTGGAGGAGCGGATCGGCCTCGTGGACGTCGGTGTAGTCGAGTTCCGCTTCAATGTCTAGCCGGTGACGTAACACTACTTCGCTGATCTGGCAAACATGCAGGTCAAATGGGGTCTGACTCTTCGGGGTCAGGCCCCTTGATTTTTACCGTGCTGGATAGGTGCTGGATTTTCTGACCTCTCGTCACCTGTCATCACCCCTCATATCCCTACCGTGCTGGATTCGTGCTGGATGCCGACTGGACGCGCGGGCATGGAAGGGCGTGTGGCCGTGAGGCCGAGGCTCGCTGACCCGGTTGATGGGCCGTTCAGTACACGTTCTTCGTAGGCTCCCAGGCCGTTGCGGAAACAAATCTCGACCCGCCCGATGTTGTTGATCTCTGAGTCGAGGAGGGGAAGGTGTCGGGCCTGAGGCTGTTCCGCACGGACATGACGAATAGCGGCATGACCGAGGTCATGCCGCGTCTT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 347-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKB01000135.1 Streptomyces sp. SID2888 SID2888.c154, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 346 30 100.0 35 .............................. ACGGGCACGGGCATGCGGTAGTGCTCCTGGTCCCC 281 30 96.7 36 .....................A........ AGAAGGAGCGGCAGCAGCGGCTCGCCGACCACCGGA 215 30 96.7 36 ........................G..... GCGGTGGCCCGGAGCGTGTACGCGGCGGCGGCCTCG 149 30 96.7 24 .................A............ CGCTCCCCGGGGACCCGGCCGCCT Deletion [96] 95 29 83.3 34 .C...AC..-...T................ CCGTTGACAGCGGGCGCGTGGCGAGCGTCTCCAG C [92] 31 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 95.6 33 GTCGGTGATCAACCCTGGAGGGTTCGGAAC # Left flank : TCAGATGGGGCTTGACCGGCGAAGAGGCCGTGATTGCGACATCTAGTGGGCGGCTGGCCCGGAAATGGTCCGGATCTTGGTCCACTGGTGCTCCCGTCAAGTCGCCATGCGGTGGGTCAGCGTCTGACGCCTCAGGTTGACCCCGGGCAACTGGCGCCAGTCGTTGTCGCCTCCGTCTCCGCCCAGCACCTCGTTGTCTTTGCGTTGGGTCCTCTCTGTGTCGTGTGCGGAGAGGGCGGCGTCGCCGCGTTTGGCGTTGAGCGGGCGCAGAACGGCGCAGTCGTTTCTTTCAGTGGCTCCTACCTCTTCGTCCGTCTTCGCCTGTTTCGGCTTGGGTTGGCGGTTTGTGTGAGGAGGCCCCGCGCTACGATCGACTGACAGACGGGCGGTGCTGATGAGGGAGGGCTCTGACCTGCGCAGTTGCATTACCGGCGGACTGCTGCAGTTTGCCTCGCCGCCAGAACTGCGGGAGCTTATGTGACCTGCGGCTTTACTCTCGG # Right flank : CA # Questionable array : NO Score: 2.63 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGTGATCAACCCTGGAGGGTTCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //