Array 1 45159-38647 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTVM01000004.1 Azoarcus taiwanensis strain NSC3 NODE_4_length_67741_cov_3.52847, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 45158 32 100.0 34 ................................ TTCACCCACTGCGTTGTTTCCAGAATCAAAGCAT 45092 32 100.0 35 ................................ ACGTTGAAATGGGGTTGGATGAATCGACCGGACGG 45025 32 100.0 35 ................................ ACGACGAATTAACTCGTGCTGCCGATTGCGTCCCG 44958 32 100.0 37 ................................ GGCATATCTGCAAGGCGTTGCGGGAAGGGCGGCGCGT 44889 32 100.0 36 ................................ CCTGGCATGGGATCGGGAAGCGGTGAGGGCGATGGG 44821 32 100.0 33 ................................ TATAAAGGCGAAACCCACACAGAAGAACCTTAC 44756 32 100.0 36 ................................ AATTCTGAGACTTACTTATGCGAATCGCCTCCAAAT 44688 32 100.0 36 ................................ ATCATGCATGTGCTTGCGTATATCGGGGTTATCCGG 44620 32 100.0 36 ................................ GGTTCGAAGGTCGCAACGGTGCACCGTTGGGGCCAA 44552 32 100.0 35 ................................ TTGCTGGCGTCTCCGATCATCGTTGGTGCGATCAT 44485 32 100.0 35 ................................ CGTCACCCCCACGAAGGGTGAGCGCAAAGGCGACC 44418 32 100.0 34 ................................ CATAGATCGGCCTTCCCGAAGTAGGGCGCGCAAA 44352 32 100.0 34 ................................ CGTTGAAATGGGGTTGGATGAATCGACCGGACGG 44286 32 100.0 36 ................................ CTGCTCGGGGAATGGACGAACGTACCTACGGGGGGC 44218 32 100.0 34 ................................ TTGATTGCAGTGTCAGTGATTCCAGCGGGAACCG 44152 32 100.0 35 ................................ GACTGTTCGCACCCGCTGTTGATGCGGTCATGTCC 44085 32 100.0 35 ................................ ACTTGCTTCAGCCATATTCGGGCGATGACATGATT 44018 32 100.0 35 ................................ CGCTTATGCGTATGCACCGTCGCAGATTTATAAGC 43951 32 100.0 36 ................................ ACACGCCATGGCGGCTGATTGATCGCCTCGCGGACG 43883 32 100.0 35 ................................ AATGCGTTCATTGTTGAACTGACGCTGAATCTTGC 43816 32 100.0 35 ................................ CGCAGCCGTTGACCATTGGTGAAATCATCAAACTT 43749 32 100.0 34 ................................ ACGTACCTTGCGCTGGTGAAGGCAGGGTACGGAA 43683 32 100.0 34 ................................ GTTGCTGGCGTCACGGTCTTGTGTGCGCTTCACT 43617 32 100.0 35 ................................ TGTGTCTGTTTTGTGTCAATCCGCAAAATTTGAGC 43550 32 100.0 36 ................................ AGCGTGCAGGCCATGATTCTGGCAGGTGCCGTACAA 43482 32 100.0 33 ................................ CAGTGCATCACGTCACGCACTTGCTTGTGCCAG 43417 32 100.0 36 ................................ TGGCAGTTATGCCGGAAACGACTGGATGCAGACCGT 43349 32 100.0 34 ................................ AGCAACAACCCGAACAGCAGGGGTTTTGCAGATC 43283 32 100.0 37 ................................ TTCAAGTATGGATTCCAGCGCGTCCAGCTTGGCATCA 43214 32 100.0 34 ................................ GTCGTGCGCTTCTTGAGTACTCCTGTTATCTCGC 43148 32 100.0 34 ................................ CAGCGCTTTGTAGCCCACGCAGAACATCTCGAGC 43082 32 100.0 35 ................................ TCTTGGGTCTCGGCCTCCCGCCTTTCTCAGCTACT 43015 32 100.0 34 ................................ AAAACCCCCATCCGGCCATCACGCCAAACACCAC 42949 32 100.0 36 ................................ GTGAGCATCCCTTTAAGGTCCTGCCCGGCCAACCAC 42881 32 100.0 33 ................................ GCCTCGCCGGCATCACCCCCGCAGCCATGGCGA 42816 32 100.0 36 ................................ ACCGCCCCATTCGCCCTATCGAGCGAAAGCATCATC 42748 32 100.0 34 ................................ ACGAAACGACGGCGCACGGGCTCGGGCGTGGTGT 42682 32 100.0 34 ................................ CCGGCTGACGAGGAGCCGCTGATCCGCATCGAGC 42616 32 100.0 34 ................................ CCAACCTCCGGAACGAGGTTGGGAAGGTTGGGAA 42550 32 100.0 35 ................................ CGTCGCATAACGTCTGTCAGCGCCGCCCGAGCTGC 42483 32 100.0 33 ................................ ACCGGCTACGTGGGCGCTACTCTGCTGCCGGGC 42418 32 100.0 36 ................................ ACCGGCTCCGGAGTTCGTCGTGCCGACGATGCTGCG 42350 32 100.0 34 ................................ CGGTACGCAGCCTCACGGCTCGGCATGCGCCTTG 42284 32 100.0 34 ................................ AATGGGATGTTCGCAAATAGAGCCGATGGCATCG 42218 32 100.0 35 ................................ TTCGGCAGGGTCGCGTCAATCGTCGCCGAGTACGT 42151 32 100.0 34 ................................ AACCGCCCCGGTGCGGTTGAGCTGGATGACATTG 42085 32 100.0 35 ................................ CTCATCACCGCGCCTCCAGCCGATATACGCCATAC 42018 32 100.0 34 ................................ ACCGTCGGCAGAGATTGCAGATGATCGCTCATTT 41952 32 100.0 36 ................................ GAAATCCAGACCGCGACGACCGCGATCCCGACCACG 41884 32 100.0 34 ................................ TCGGTGAGCGCGTCGGCCAGGATCTGCTGCGCGG 41818 32 100.0 34 ................................ GGGTTTACCAACGTGCTCGAGGGGCACCCGTTTG 41752 32 100.0 35 ................................ TCCGGAATGACGCTGACGGCGTCGACCGGCTCGGG 41685 32 100.0 33 ................................ GCCGGAAACATGCACACTAAACCGGCCGCCGAT 41620 32 100.0 34 ................................ GACCCGGAAGCCTGCCGCGAGTGGCTGAGTGACC 41554 32 100.0 35 ................................ TTCCGCGCCCGCATGGAGGGCGAAACCTTCGCCGG 41487 32 100.0 33 ................................ ATTCGTGGCACGAGCGGATCTTCTATAACCGGC 41422 32 100.0 34 ................................ GCGAGCTTGAACGCACCGCTTTCCCAATGGGCTT 41356 32 100.0 35 ................................ CAAACGTCCGTCCACGTGTATTGCTGCGCGTACGC 41289 32 100.0 36 ................................ GCCAACCCGACCAACATGGCCGGCCCGCGACTGTGG 41221 32 100.0 36 ................................ GAGCATTTTCGCGGCGCGGCGTCGATTGCCAAGGCG 41153 32 100.0 35 ................................ GGCCCGGAAGTGCGTCATCTGCAAGTCGAATTTAC 41086 32 100.0 33 ................................ GCCACTACGGGCACGATCAAGCACAGCCACAAC 41021 32 100.0 34 ................................ ACCGGCCAAGCGTGCGCGCAATCGCAAGATCCAG 40955 32 100.0 36 ................................ ATAAACTCGACGCGCATCGACACGCGCCGCCGCCAC 40887 32 100.0 34 ................................ GTGCGGGAAGGGGGAATCACTTACGCCCGCCACG 40821 32 100.0 35 ................................ GCGGCCAGGAAGTCGGCCACCACATCGCCGAACCG 40754 32 100.0 35 ................................ CGTCTTGTTGCATGCGGGCCACCTCCGCGGGCATC 40687 32 100.0 34 ................................ CTGTGGTGCATATCGCGTGGTACAGAAGCCGGGA 40621 32 100.0 34 ................................ AGCACCGACCCTGTGCCACCCGTTGAGCTGGAGT 40555 32 100.0 34 ................................ GATTTTTCGACGAACGCGCTTCCTGCCGACCCTC 40489 32 100.0 36 ................................ AGCGCGACTTTCGCCGGGTCCAGATTGACATACCGA 40421 32 100.0 35 ................................ CGTCGCAAACGTCAGCCGGCGTCCGGTGCCCTGAT 40354 32 100.0 35 ................................ GGCTGACGAACGCAAGGCTATGTCTGTCGGCTCCG 40287 32 100.0 34 ................................ CGGGTCAATCATCCCGTCAAGGTCAATGCCCAGC 40221 32 100.0 37 ................................ GATGACCTGGATCTCGAGCACCTGGCGGGTGTCGAGG 40152 32 100.0 34 ................................ GTAATGGCCTCTGACGGTTTGACGGTGCGGCTTG 40086 32 100.0 37 ................................ GGCGAGTCGGCGCGGCAGAACTTTGACCGCGCCACCG 40017 32 100.0 35 ................................ AACACCGTTGGCGCGACGGGGCCGACTTGGATTGC 39950 32 100.0 36 ................................ AACTCCGCACCCATCGACGCCATCACCCCGCAGCAC 39882 32 100.0 34 ................................ ATCGACAACGATGAGGGCGTTATCTTCCGCCCAA 39816 32 100.0 35 ................................ TACATCAACCGCTGACATGATCCCGAGCAACTGCC 39749 32 100.0 36 ................................ ACCCCAGCGTCCGGCGAACCAAACCAGATCTTGCGA 39681 32 100.0 34 ................................ GAGATCCTCCACGCCCGCTTCGCCAACAGCGTCG 39615 32 100.0 35 ................................ AGGTTGATCGTGACGGTGCCAAGCTGAGGGCCGGC 39548 32 100.0 35 ................................ GCACCATCAAATACCAGCGCCGGGTGGCTGGACTC 39481 32 100.0 34 ................................ GGTTGACTGGCACGCCCTGGTTGCGGACGATGCC 39415 32 100.0 37 ................................ GCGCTGGTAGTGCTCGACCAGGGCGCGCAACTCGTCG 39346 32 100.0 34 ................................ ACCTTCTCCGTCGCCATCGCCCTCACCGCTTCCC 39280 32 100.0 36 ................................ ACCATGTATCGAGACGGCGTGCACGGTGGCTGGATA 39212 32 100.0 36 ................................ GGGATCGGCTGGATTTTCGATGATGTCGTCCGGGGG 39144 32 100.0 34 ................................ GCGGCCTGGCGCTCGTATCTCCGGGAGGTGGCGC 39078 32 100.0 35 ................................ ACTTGCTGAGGATACGTTGCATTGGGGCGTCACTG 39011 32 100.0 32 ................................ GTGCCACGACGTACCCGGGTCTGGATTGATGT 38947 32 100.0 35 ................................ TGGCGCAACAGGTAGTTTTCGCGGCGAGCCGGGCT 38880 32 100.0 35 ................................ AGACCCTCGATATACGCGACAACGCGCCGCCCTTC 38813 32 100.0 35 ................................ GCTGCCGTTATGGTGGCGGCTGTGTTTGACGTGGC 38746 32 100.0 36 ................................ TTTTGCTGACCGCTCGATTTGCTTGGTCTTGCGCAG 38678 32 96.9 0 .................A.............. | ========== ====== ====== ====== ================================ ===================================== ================== 98 32 100.0 35 GTCGCGCCCCGCGTGGGCGCGTGGATTGAAAC # Left flank : TTTCTGTGGAAATAGGTGCCGCCATGATGGTTCTCGTCAGCTACGATGTCAGCACCACCAGCACCAGCGGTCAGAAACGCCTGCGCCGGATCGCCAAGGCATGCCGGGACTACGGCCAGCGGGTGCAATATTCCGTGTTCGAGATCGAAGTGGATTTCGCGCAGTGGACCTTTCTCAAGAGCAAGCTGTGCGACCTGATCAACCCGGAGCAGGACAGTCTGCGTTTCTACTACCTCGGCAAGAACTGGCAGACCAAAGTCGAACACGTCGGTGCCAAAGCGGTGCTCGACCTGAAGGGCCCGCTCATCCTTTGAATTTCCGTTCGCGAACCTGTAGCGGTCAGCCAATACCCGGCAGGTTCGCGACACCTCAAAGCCACCGGTTCTCCCGGCATCCGGGCGCGGCGTACAGCCACCAGGCCGCGTTTTCGCGGCAACACACCCGCGGTTCGCCGAGATCCGGTATTTTTCGTATTGTCTTCATGCTGTTGTGAGGACGCA # Right flank : TTCACGCCGAAGGATCGCTGCTTCAGGCGCTCCGCGTTCTTCACAGCGGGTGGGCTTCACCAATCACTCGCGCGCGGATCCGCTTGGGCAGGTCACGGGGTGTGACCACATCAACGCGAACGCCCAGCATGTCTTCAAGCTCTACCTGCAGGTCACCCAAGTCGAACAGAGTCGTTCCAGGTTGTGGATCCACGAGCAGATCGAGATCACTGCCGTCCTTGTCGGTTCCATGCAATACCGAACCGAACACCCGCGGATTGCGCACACGAAACCGCGCGACCGCGTCGCGGATCAACTGCTCGCGGTGTCGAAGTGCGTCCGAGGGTTTCATGAATCACCTGAATTGAACCAGTACTAGCATTCGACCAAGGGGGGATTGGAATGCAATAACGTTTGAACATCCGGCGCATTGCTTCAAACTCGAGCGAACACGCGACGCGCGCCTCAACGCTGGAACCTCCACGAACAGATGTTTTCATAGTCCGTGTTGTGGTCAGCTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGCGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.10,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //