Array 1 238708-239601 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXCM010000023.1 Coprococcus catus strain VPIC661 NODE_3_length_258781_cov_149.876_ID_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 238708 33 100.0 32 ................................. ATTCCTTTTATAATTGCCGATACATTATTCAA 238773 33 100.0 36 ................................. CCGAGTCCCTTTTTTGGCAGTTGAAGACAGAAAAAA 238842 33 100.0 33 ................................. ATTTTAGAAAGGTGGTATTATGAGTTTATACGA 238908 33 100.0 34 ................................. ACATCTTTATTGGCAAATCTCATATAAGTATCGC 238975 33 100.0 32 ................................. AACAAAATGGTTTCAGATGGGCTAGCAAAAAG 239040 33 97.0 32 A................................ TTTAAACGGTCAATCTCTTTATCTGCCAGTTT 239105 33 97.0 34 C................................ CAGCAGATTTAGGCTTAACTTTAGGTGCTTTAGC 239172 33 100.0 32 ................................. ACCGAAGGTGAAGTGATTCCGCTTTCTAAATA 239237 33 97.0 32 C................................ CCGATTTTTCAGAGATGAGCTGGGTCTGGAGA 239302 33 100.0 36 ................................. GGGATGGACGAATGCTGCGTCAAGCGACAACGGAAA 239371 33 100.0 34 ................................. GGTTTGAAACGAATTCACAGGGTTTTGTTGAAAA 239438 33 100.0 33 ................................. GAATGTTTAAAAATTGCGTATTAAAACCCGATG 239504 33 100.0 32 ................................. CACGGGGATGCGTTTATTTATGCAATAATTGA 239569 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 99.4 33 TATTTCAACTCACGACCTCACGAAGAGGTCGAC # Left flank : GCCAAAACGTGAAGCGCCAAGTATTTTCAACCTTCCGGAGACAGAAACACGGCGTTTAGCCTTGCGGGCTTCTTCTGCCTTCTCAGTAACTTCGAGGTAAATGGCTTCCGTCATTTTCCCAGAATGTTGATGGCTTTTTTTAATACATCAAGTGCATCCTGTGCATCACGTAGTTCATGCTTTAAACGTGCAATTTCCTTTGCTTCATCAGAAGCATAGTTGCCGGAACCACGGCTCTCAATGTCTCCGGTGTCACGCAGTTCTTTCTGCCAGCGAGACAGTGTCTGATGACTGATTCCTAAGTTTGAAGCGCAACCCTGCAATCCTAATTCTCTGTGATCATGATAATACTGGATTACATCCAATTTAAATTGTTTGTCATAGTGCTTTGCCATAATGAAATCCTCCTTCAGTGCGGTAACTACATAGTACCATAAAATTTGTAATTAAGGATTCTCATTTTGACTTGTACTATTTATATTCTAGCACCATACATCCTG # Right flank : CAGCAATTTCATACAACACTACGTCATTTAAAATTGTCTTTTTTGTGCTTATATTATATTTTTGAACATTTTTTATTATACTAAAATAGTTTTTTGAGTATAATTACATTCAAATACTCTTGGTTCACGGTGCGAATATTCCAGAAAATTTCTGTGTACTTAACATTCGCACTATAATATTAGTGTATCCGTAACATCAAATCCTGGTTTTACTCCAATATGCTCTACTTTATTTTTGTATTTATCCCCAAGATAGTAAAATCGTAAGCTATCAGTTTCTTTATCGATTATATTTTCCAAAATATTTTTCACCTGCCTGCATTTTGTTGTATCCATCTGACACTCAAAAACAGAGTTTTGTACACGTTGTCCATAATTAGTGCATTCTTTTGCTACTTTTCTCAAGCGTTTTCTGCCGGTTGATGTCTGCGTATTCACGTCATATGTAATCAACACTAACATTCAATCACCTACTTCCAGAAAAATGGAGGATATTCGTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATTTCAACTCACGACCTCACGAAGAGGTCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //