Array 1 626954-627189 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016453.1 Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 626954 36 88.9 29 .ACA.A.............................. GCAATCGCGGCGTCAATGGTATTCGAAGA 627019 36 100.0 30 .................................... CTCGCGCTTCACGCACGCCAACTATGCCCT 627085 36 100.0 30 .................................... CAAAGCGTCGATCGGCGGTGGATCTGCAAT 627151 36 88.9 0 ...........................C..G..GG. | TAT [627177] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 94.4 30 GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT # Left flank : CCCGACGGCTATGCCGCAAACCCGGCCATTGGGCCACAAGTCGAAGCGCTCCGCGCCTATTTGCGTGGCGGCATCGGCGGCGGCTCGCTCTATTCTCGCTCTCTCATCCTATGGGCGGACAGCCAGCTTCATGGGGTGTTGGTGCCAGAGCAACGTACCAAAATCCTCGCGGAATTGATGGCAAACCAGCGACCGGATGGCGGCTGGAACCTGCCGAGCCTATCGACATGGCAGCGCATCGATGGAACGAGTTTGCCACAGGAAAGCGACGGCTACGCCACCGCATCGGTCGCCGTCATTCTACGAGAAACAGGCGATCCGTCCACTGCAACCGCCCTAAAGCGCGCGCAAAAATGGTTGGCCACCCATCAGGACAAAAGCGGCGCGGTTCCGGCAAAGTCGATCAACAAGGATCGGCAACCCGGCACCGACGCCTATCTATTCATGACCGACGCGGCCACGGGTCTGGCAGGATTGGCCATGCAACCAAAGCAGCCATA # Right flank : TCAAGCGCATGCTGTGGTCCAGAGACGATCTGCCCTGAGTAGCGCATTTGCGGTGACGATGAGCTTTCGCATGATGGCTGTGATGGCGATTTTGGCGGGTTTTCCGGCAGCGATGAGCTGCTGGTATTTGGCCTTGAGGTTTGGATTGAATCGGGCGGCGACCAGAGCAGGCATGTAGAGAGCCTGTCGGACATTGGCCCTACCGCCGCGGATGAAGCTTTTGCCTTTCCATTGGCCGGACTGGCGCGCGACCGGGGCAAGTCCGGCGAGCGAGGCAGCCTGCTTGTTATCGAGCGATCCGAGTTCGGGCATGGTGGCGATGATCTGGTTGGCGGTGAGTGTGCCGAGGCCAGCGATGCTGGTGAGAATGTGGTGGCGCCGGACGAGCTTTTCATCTGCGGCAATGACGGCCGCGATTTCAGCGTCGAGCGCAGCGATGTGGCGAGCGATCTGTTCGAGCCGTTGGCTGCACTGGCGCTTAAGCAGCGTGACGGTGAGGT # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATGAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 628381-628813 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016453.1 Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 628381 36 100.0 30 .................................... GCGAATATCTGCGCGCTCCCCGGCCTTTAT 628447 36 100.0 30 .................................... ACAACGCCCCGCCGGGCACGAAGCCAGACA 628513 36 100.0 30 .................................... GCTGAAGATGATGACGACGACATTGATGAC 628579 36 100.0 30 .................................... AACGGATGTTTGATTGACAGTTCGGCGAGC 628645 36 100.0 31 .................................... TGACGATCGGCGGCTGGGCGGGCGCTTTTTC 628712 36 100.0 30 .................................... ACGCCGACCGAAGCACCGATGGTCATTGCG 628778 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 7 36 100.0 30 GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT # Left flank : GCCTTGCCCGTTCCGGGTTGAGCTTGACGCAGGGCATATGGCCGAGCGCGACCTCCAGCGCGCGGTGGTAGATGCCGGTAGCCTCATAGGCGATCCGCTCGACCTCCCATTGCCCGGCCCATGCGATCAGGGTCTTGTGGCCCTTGGTGGTGTTGGGGAACTGGCGCTCGATCCCGATGGGATGGACATAGCAGTCCAACGTCGCTTTGGAGATGTCGATGCCGATGGTTTGTGGTAGAGAGTTGCTCATCTTTTTCGCTGTCCCATGCTTGTCATCCGGGCCTTGAAAGCCCCGGTATCCGTTCGGGCCTGATGAAAAAGAAAGGGGCGATCCTACTCTAACCCGGTCCCTTCACGACCAGCGGTTTTGCGATCCGTCCCCTTCCGTCCGGTCCGGGGTGGCCACCCCGGACCGGACATCGCATCCTGACCCGAACGGACCACAAAGTCATAAGACAAGCGGTTATAATTAGAGGATGCGGCTGATACTCTGAGCCAGA # Right flank : TAGATCCGTCGTTATCGCATTGAAAACCAAAGCGATAACGACGGATCGACCGCCTTCAAAACGACCCGAATCGCTAAAATAAAGCCAGCTGATCGGGGTTTTTCCGCTGCCGCCTGCGCCGTTGCCCTGAAAATCGCACGATATTCTCATATTGCCGGTCCGTGAAACTGAGGATGTGGACATCGCCATTATCGGGGAGCTTCGCTTCGACTCGCCGCATGTAGGTTTCAAACTGCTCCTTGCCGTTGCAGAAACGAGCATAGACGGAAAACTGGCTTTTCTCAAAGCCTTCGTCCAGCAGGAACTCGCGAAATTTGGTCGCGGCACGGGCCTGCTCCTTGGTGCCCACGGGCAGGTCGAACATCACGAAAATCCACATCAGGCGATATCCGCTTAGTTGGTTCGCGCTCACGGGAGTAGCGCGTCGAGCCCGGCCAGTTCCAGCGTAGAAGGCGGGACCGGAAGAATGATGTCGGTCGCCAGCCCGCTTTGAAACGCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATGAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //