Array 1 616578-617135 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LS483368.1 Streptococcus equi subsp. zooepidemicus strain NCTC6176 chromosome 1, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    616578	    32	 100.0	    34	................................	TTTAAAACGTATGAAAGCAGGAAGCTTTCGCCCG 	
    616644	    32	 100.0	    33	................................	TGGTGTGCCATCTCCATCATAGTAACCAGTATC  	
    616709	    32	 100.0	    34	................................	TTTAAAATTTTAAAGACCAAAGACAAAAGCAAGC 	
    616775	    32	 100.0	    35	................................	TTCTCTGGCACTATCTAGCGCCACAAAGTTTTGAC	
    616842	    32	 100.0	    33	................................	TGAGCTTGACATTTCTGCTTACCAGAAGAAAGC  	
    616907	    32	 100.0	    35	................................	TAAAGTTTGAATAAACAACAGCTTCCATACTAATC	
    616974	    32	 100.0	    34	................................	ATCCGATAGGTGATTTTACGGTGCTGACTCTCCA 	
    617040	    32	  96.9	    31	.....................T..........	GCGATACGTGCCTTTACGATGTTGCGACTCC    	T [617070]
    617104	    32	  68.8	     0	........C..TG....T.C.T..T.C.T.T.	|                                  	
==========	======	======	======	================================	===================================	==================
         9	    32	  96.2	    34	GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT	                                   	       

# Left flank :   GCTAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACGGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGGGTCACTCATAAAATGCTGTGAGACTCGCGCTAAAATAAGCTAAAAAATAGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCG
# Right flank :  TCTTTGTTTTTCATGAAGGGGTAAATCATATTGTATTCATCAAGCTGATTTATGCTTTTTATGGTGCTATGTCAAATAGATAAAAACCAATCTGAGGTTGTTGAACAGGATTGGTTTTTTCTTGTGATTGCATATCAGACTTTTCAAAAGAACAAGCATATCATCTCAGTTGGGCTGGTGCTTGATAGCTCCTGAGCTCTTATTTATATAGCTGGTAGGATGTTGCTGATGGCTTGGTAAAGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCCGCCCTACTTTGGGTAGAATGGAGATAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTTTATTTAGGCATTTTGTTAGATTCTGATGATTCTAGGTCTATTACTATTTTTGGCAAGAAACTATATTGGTAC

# Questionable array : NO	 Score: 9.24
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.40,-2.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : NA
//