Array 1 70359-74286 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAHAO010000014.1 Klebsiella pneumoniae strain 23KXXI NODE_14_length_168248_cov_47.494853, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70359 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 70418 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 70479 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 70540 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 70601 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 70662 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 70723 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 70784 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 70845 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTATGAGGTGACG 70906 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 70967 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 71028 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 71089 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 71150 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 71211 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 71272 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 71333 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 71394 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 71455 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 71516 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 71577 29 100.0 10 ............................. ACATAGCGCC Deletion [71616] 71616 22 51.7 0 CGA.A.G.A...........T.------- - Deletion [71631] 71638 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 71699 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 71760 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 71821 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 71882 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 71943 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 72004 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 72065 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 72126 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 72187 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 72248 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 72309 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 72370 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 72431 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 72492 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 72553 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 72614 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 72675 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 72736 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 72797 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 72858 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 72919 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 72980 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 73041 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 73102 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 73163 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 73224 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 73285 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 73346 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 73407 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 73468 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 73529 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 73590 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 73651 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 73712 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 73773 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 73834 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 73895 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 73956 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 74017 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 74078 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 74139 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 74200 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 74258 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 66 29 98.5 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [11-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //