Array 1 25812-24885 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYMG01000019.1 Enterobacter hormaechei strain MNCRE15 CRE15_contig_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 25811 28 100.0 32 ............................ AGCACGAATACAAAAGCAGTAGTCATCAACTT 25751 28 100.0 32 ............................ CTCAGCTGTAATGCGCTCCACGCTGTTGATAC 25691 28 100.0 32 ............................ TTTGCCGAGACCGTCGAGCAGGTCAAACAACA 25631 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 25571 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 25511 28 100.0 32 ............................ GGTGAGCGCAGCAGCATGACGGCGCTGAAGAA 25451 28 100.0 32 ............................ ATTGCACTGAAACTATCCAGCGCACGGAAAAA 25391 28 100.0 32 ............................ GTTATGGATTTCGACGCCAGTAGGGAATGACA 25331 28 96.4 32 ..........A................. TGACTGCCCAGGGTGATTTTGTACCGCCGAAA 25271 28 100.0 32 ............................ AGTCGAATTGTTGCCAGTCGGCTTTATCCATA 25211 28 100.0 32 ............................ TGGAGCCTGAAAGGTGATGCGCCAGCTCCGGC 25151 28 100.0 32 ............................ GACAACATCAACAATCGTCATTGCTGCCATCA 25091 28 100.0 32 ............................ GATGGGGAGCGGCAAAACACAGGCGCTGCTTC 25031 28 100.0 32 ............................ GCTACGGCTGCGGGTATGAATCCGGTTTTATC 24971 28 100.0 32 ............................ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 24911 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 16 28 98.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCTATCAGCCGCATGCCTCTGCTTGCAGGCAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTGAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATCTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : CCCGAAACAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGTATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 36696-35288 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYMG01000019.1 Enterobacter hormaechei strain MNCRE15 CRE15_contig_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 36695 28 100.0 32 ............................ GTGTTAACTCGCGATGGTGGTGGCCATGTTGG 36635 28 100.0 32 ............................ TCCATCTCGATGTAGACAAGGGTTTTCCCGTC 36575 28 100.0 32 ............................ AGAGATTGTTGACGACATCAGGATGATGGGGT 36515 28 100.0 32 ............................ AATCAGCAGCTGATCCATACAAGGGTTCTTTT 36455 28 100.0 32 ............................ CGTAGACACAGCGGCAACAAAGCGATCGTAAA 36395 28 100.0 32 ............................ TGACGACGGCACGACTGTCGCGATGTTTTTAT 36335 28 100.0 32 ............................ TCGCACGGACGGTGATCCGTTGGGCATGAATC 36275 28 100.0 32 ............................ GTCCAGGTCTGCGGTGAGCGCTTTTAGTTGCT 36215 28 100.0 32 ............................ ATTACCATCCGGGCCTTTACCGTTTACTGTTT 36155 28 100.0 32 ............................ GTGCGTCTCGGTCGATGCAAAGTACGTCCCGG 36095 28 100.0 32 ............................ ACAGAGTCAGAGACCAGGCCGCCACCGAACCC 36035 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 35975 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 35915 28 100.0 32 ............................ GCGATATCGACGTAGCTGAAAAAGAGACAAAA 35855 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 35795 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 35735 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 35675 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 35615 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 35555 28 100.0 32 ............................ CATAACGACACCTTTCAAAATCGTTAATTAAC 35495 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 35435 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 35375 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 35315 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================ ================== 24 28 99.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //