Array 1 1532707-1534626 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051205.1 Chitinophaga oryzae strain 1310 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================================== ================== 1532707 29 100.0 37 ............................. CGAAGCTGTAGAGGCTATTGCATCCGCCGGTGAGGGT 1532773 29 100.0 37 ............................. CGCTTTCAGCATTACGGAAAGGTCTTCGGCGATACCC 1532839 29 100.0 37 ............................. CGGAACCAGCTCCAGGGACAGCTTGCCGTAGGAAATG 1532905 29 100.0 37 ............................. CCCGATAACCTTAAAGCTCTCGATGATGGCGTTGAAC 1532971 28 93.1 37 .................A-.......... CAAACGCATTCACAAGCCGGCGGATTTGGCCAAACAG 1533036 28 93.1 38 .................A-.......... CAGCAGTCGTTCTTCATACTCTGCTCTTCCTGGAAGGT 1533102 29 100.0 39 ............................. CTCCTTAACGCTGTACCTTGTGTACGTGGCAGACGGAAA 1533170 29 89.7 36 T.......C.........T.......... CGTAGAAAACATGCCCGCAGTGCTGCGCTGGTTTTG 1533235 29 96.6 38 .C........................... CTTTGCTAGTTTACAGATCGTTAAAACCTCGATGTCTT 1533302 29 93.1 38 .................AG.......... CACGGTAACCTGTAAAAGATCTTCATGCCCGCTTAGTT 1533369 29 100.0 37 ............................. CATGGTACATTCACCTTGGAAAACAGCCGCGGATATT 1533435 29 100.0 36 ............................. CTTATACCAGCTGACTACATTATCCCACTTCATCGG 1533500 28 89.7 36 ................-TA.......... CCGTAGAACATGTTCACGTAGCCCGAACCCGGCTAA T [1533523] 1533565 28 89.7 36 ............G...-.A.......... CATTAGTAGAGCCCTGCGGAATTTAAAGAGATAACC 1533629 29 93.1 38 .................AA.......... CCGATATGATGTTGTGGGCAACACATATTTTGAAGTTA 1533696 28 86.2 37 ...............-C.T.....G.... GAACTCTTTCAGATACCCAAATTCACCGGCTTGCGCA 1533761 28 82.8 98 ...............-A.A.....G..G. TCAGAATGAGGCGTTCCCGATTGTGGGGAGTCAGGTTTTAATTCACTTTTAAGAATTGAAATACCTACTACCAGCTAGGTATATCCTTCAATGCCTGG 1533887 28 86.2 37 ................-TAA......... CTCAATGCCAGAGTTCACAAGACACGGATTTAGGACA 1533952 28 82.8 37 ............T...T.-A.....A... TTTTTTCATCGCCATCCTGTGGACCGAGTCCGTGGCT 1534017 28 79.3 37 ..........T..A.A.A.-....G.... GAATACCTGCGCAATCGTTAATCATAGGGAAATATTA 1534082 29 82.8 37 ..........AG..G..AG.......... GCTGCGCTTCGTGTAGGTCGCTCCGAACAACAGAACG 1534148 29 93.1 38 .................AA.......... GAAAAATTTGTTACCGCAATTCGCGTCAATAGACCGCG 1534215 28 75.9 36 .........A.TT.T.A.-...T...... GCTTTGAACGTTAGCCTTGGGCGCATCGATGGAAAA T [1534222] 1534280 29 86.2 30 ........C.....G..AT.......... TTCAATGTCTATCTGTATTACAGACTGACG 1534339 29 75.9 102 C.C.....C...T.GGC............ TTGGCCGACGTGGTAAAAGCCACGGTGCATGGAATACTCATAATCGGGCCGTTGCTGCAATTGAAACAACATTCCCCACTTGTGGGTATCCACTACATTTTC T [1534357] 1534471 28 82.8 35 ..........C.TC..-.A.......... CTACGCATAGCCGTCTAGTTCATCTTCTTTAACGC 1534534 28 72.4 37 AG........C.....-TA......T..G TGATATTACCAAAGGATTTACGGTTGATGAAACAAAG 1534599 28 82.8 0 ..........C..A..-AT.......... | ========== ====== ====== ====== ============================= ====================================================================================================== ================== 28 29 89.5 41 GTTTTAATTGGACTATGGCGGAATTGAAA # Left flank : TATTCGGAAATTGTCTGGTATGTCCGAAGGAAAGGAGAGAAGAAATTATCCCAGCTTTGGCAAAGGCGATCATCAACTGGCGTATAACCACTAATCAATCGAGAACTTTTGACCCTATGGGTATTGTGGCGATCGTGATCAGCGATAATGCCAATCAGATCACTTACGCTATCCGGGGCGATCTTCGGGATGATATGGAAAAAAGGCTGGCGACTCCCGTAATTGACCTAAGCGCTAAAGCAGATTTTTTTGTTACACCTACAGCAGGGAGCTATGTGCCTGGTGCTATAGGAAGTGCCGATGCGCTGGAAAAAGCAGAGGAGAAGCTGGTGAAACTAATGGCAGCTTATCCGTATGATTGATGTTGATTTTTATTAATAAGTCGTCGATCTCCGGGGTAAATTCCTTTATTGGAGATCGACGACTTTTGTTTGAGAAAAATAGATGATTGATGCTTGGAAGTGCTTGATGGATGGGAGGCTGGTTGGAAGTTGTAACGG # Right flank : ATACGAAAAAGTCACCGGTATTTCGAATCCAATATTGCTTTAGCTAGTCGCACTGTTACGGATTTTTCTCACTCACCACTATACACACCTGCCACCACCTGCTCCCATCCCTTCATCTCCTCCAGCGCCCCCCACGTCAGGCTCCTGTCCGCGCGCAACCGCGCCTGGCAGAACATCTCCGCCATCTCTGGTGATGCCGTCTGTATCAATTCTATCGCTTGTATCGCCAGCGCCATTTTTTCTACGATGGTCCTGGCGGAACGTTCGTAATCCGACGGGCGTGCAAGCAACAGTTGCAACCCTTCCAGGTGCCTCTTCAATAAAGGATGTAATCCGGCGCCTTGTTGGAAATACTGCATCAGCGCAGCCACGCTCGCGGGTTCTTTCTGCATGGCCCGCAGCACGTCCAGCGCCTGGATGTTTCCGGAGCCTTCCCAGATAGCATTGACCGGCACATCGCGGTAAAGCCGCGGCAGGATAGACGTTTCCACGTAACCATT # Questionable array : NO Score: 4.67 # Score Detail : 1:0, 2:0, 3:3, 4:0.47, 5:0, 6:0.25, 7:-0.39, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTGGACTATGGCGGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-60] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //