Array 1 449214-446702 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021879.1 Desulfosarcina ovata subsp. ovata strain oXyS1 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 449213 36 100.0 33 .................................... GTAAAGCTTTGTACCCTTTTGTTGCCGGATCCG 449144 36 100.0 33 .................................... CAGAACCGCGACCCAGAGCCACCAAGTCGCCTT 449075 36 100.0 34 .................................... CTGGCAACTTTCTCTTCTGTGTAGAGATAATTTT 449005 36 100.0 33 .................................... GGTTTTGTCTTCGCCCATATAGCGAATTCTAAT 448936 36 100.0 34 .................................... TAAATTAACTAAGCTTATGTAAAGACTTATGGAG 448866 36 100.0 33 .................................... AAGGATGTTCTGGTCACAGTATCTGAGAAAGTC 448797 36 100.0 33 .................................... AAACAGCACCGATGCTTCTCCGTTAAAACCAGG 448728 36 100.0 34 .................................... GATCATCGGCACGCACACCGTAGAAATCTCTGTA 448658 36 100.0 32 .................................... TGAAAAAGCTCGCCGTTAGGCTTATACCAACG 448590 36 100.0 33 .................................... TCAGTTCTTTGATGCGGCTTGTGAGCCGTTTTT 448521 36 100.0 32 .................................... TATTGGGTTGGGCCCGTTGAAGATCCTTCTCG 448453 36 100.0 34 .................................... AAACTTCAATTCGGCCGTCGGCAGTTATTCGAGC 448383 36 100.0 32 .................................... TCAAAGAGATGTCCGATGAAACCGCCACCGTG 448315 36 100.0 34 .................................... AAAACGTTGGTTACCATTGCCCCAAGAAGTCCCG 448245 36 100.0 32 .................................... GTTTTTCCGCCGGTTACTTTACCAGATAATCT 448177 36 100.0 33 .................................... TTCGTACCGGTTACCGGTTTACCACAATCAGGA 448108 36 100.0 35 .................................... TAACCCATATAGCACTCTCCTTATAAATTTTGGCC 448037 36 100.0 33 .................................... TATGAAGAGGGAGCCGTGATAAAACTGGCTCCG 447968 36 100.0 32 .................................... TTTCAAGAGGTTTTCCCCTCCGCAGTTACGGC 447900 36 100.0 33 .................................... CTAGTAGTATCTCCTGTCAACGAACCGGTATTA 447831 36 100.0 33 .................................... GTAGGATCTTTGATTTCATTGACATTTCCTTTT 447762 36 100.0 32 .................................... GGAGAGGAAATCGTCAATCGTTTCGAATCCCG 447694 36 100.0 32 .................................... TGACATGACCACCCTGATGGGGCAGGTCTACG 447626 36 100.0 32 .................................... AATCACTTTGGTCTGGGGCGACTCCGGCAAAA 447558 36 100.0 33 .................................... AAAGCTCCAATGCCTGTACATCGTCGATGCCGT 447489 36 100.0 32 .................................... TGAACAGACAGATGCACCAGGGAATGCAGGTG 447421 36 100.0 32 .................................... GTCAGGTTGCTGTTCGCAAGGTCCAGGGTATG 447353 36 100.0 32 .................................... AAAGACTCCTGCTTCTTTTTTGGCTCAATAAG 447285 36 100.0 34 .................................... GTCATTTCCTTGTCTGTTATAATTTTTTATTGGG 447215 36 100.0 34 .................................... CATATCCGATGGCTTGCCAAGATGTTTTCAAGCG 447145 36 100.0 32 .................................... GTGGATTAACCACTTCTCCGACAACAACGATT 447077 36 100.0 31 .................................... GTCGGGATCCATCCATATTACTTCGTTCAAG 447010 36 100.0 32 .................................... TTTTTTACCGATCTCATCAGCAGGCAACTTTT 446942 36 100.0 31 .................................... ATTAGCTCGGATTCCATATGTTCCTATTTCC 446875 36 97.2 32 .....................C.............. TTCGGAGAACGTCCAGCTTACTTCGGGTCCGG 446807 36 100.0 34 .................................... TTTATCCGGAAGGGGGGTTAACAAAAATTCCTCC 446737 36 91.7 0 .....T....C..........C.............. | ========== ====== ====== ====== ==================================== =================================== ================== 37 36 99.7 33 GGTTGGATGGTTTCCCTGAACTGAAGGGATTAAGAC # Left flank : ATGATAAAAATCATTGGGCTGGAAGATTGAAATTCTTGCTGAGAAAAGGATTTGAACGTTTTCATCTAAACCTTGATCCATTATTCGCATATGCAAAAACCAATTTAAGCTCTTCAGATGCGAGTTTGATATGCCAGATCGGTTGTGCTATTATGAATGAAAATAAGATTGAAAGTTTAGAAGAAAATGAAATTTGGAAATGGATCACCCCTATGTCATGATAGCATCATTATGAAAAATTTGGTGTATTGTTACTACGGCGATTAACTGATTCAAATTTCTACATTCCGGACATCAATTTTTCTAATAGCTAAAATTGTATGAAAAAATGTAACGTATTGAAATAAAAGATGTTTTCGTGTTTTATTTAACTTCCCCATAATGAATTGATTTTATTCTGAAAAAATATGATTTTCACGCTAACTCGAAAAAGCCGGTTTCATGTCCAAAATGGCATAGTCTATCATGCCGATATTATTGTTGTATTTGATTTGGCCAGA # Right flank : CTTCAAGCAGGAACTATGTGTCACAAATTCAGGGGTTGAATGGTAAGACAGGTTTATAGTGAAATGGAAAGATGTCATTCAAATAAAAATACCACCTGGTTCGTCACCCGGCATGCCGGAGCGCAGGAGTGGGCCTTTGATGAAGGCTTGAAAGTCGATCAGGTAGTGGATCATCTTGATACGGACGAGGTGAAGAAGGGTGATATTGTTATTGGCTCCCTGCCGGTGAACATGGTCGCATCATTAAATGAGAAAGGAGTCCGTTATTTCCACCTTATATTGCAGATCCCCAGGGAAATGCGGGGAAAACATCTGTCTGCTGATAGAATGCGCTCTTTTGGGGCTAGAATTGAGGAATATGTTGTCGTAAAACGGACAAAAAAAATAGTGGACAATGACATCAATGAAAACTTCGCACGCTAAAGGACCATCAAAAAAGGCATTTAGACAGCAACATATGAAGGCCGTTTTTTTGCATATGTTCGGCTCGCGTAGTATTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGGATGGTTTCCCTGAACTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.50,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 495738-498994 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021879.1 Desulfosarcina ovata subsp. ovata strain oXyS1 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================== ================== 495738 32 100.0 37 ................................ GGCACAGATATTTCATCAAGTAGTTGAGCAAGTTCGA 495807 32 100.0 34 ................................ CTGTACCGTGGCATCGGTCACATGTGTACCAACC 495873 32 100.0 34 ................................ TGGCTCGATCACCTGGAATAGGTGCAACCCCTTC 495939 32 100.0 34 ................................ TCAATCATAGCGCATGAGGTGTAAAAAATGACCA 496005 32 100.0 34 ................................ ATTCCCGGACCAGTAGAATTTGTAGACGTAGATT 496071 32 100.0 34 ................................ AGTTCAACTATGATGATCTGACGTGGCGCGAGTG 496137 32 100.0 33 ................................ AGACATTACGCGCGACCTACTGTTGCAATCAAC 496202 32 100.0 34 ................................ CGGGTTTCAAACGGCCAGAACTGATGGAAAGAGG 496268 32 100.0 33 ................................ CGGTAATACCGATGGGGCCGATTGATGGGATTC 496333 32 100.0 36 ................................ TGAGATACACCTATTGATTCAAGCGCCTCACCAACC 496401 32 100.0 34 ................................ CACCTAACCATTGTGTTCACGCCCCGTGATCCAG 496467 32 100.0 33 ................................ TTGAGCCCGTCGAATAGTTCGTTGGAAAAACTC 496532 32 100.0 33 ................................ AGAACCGGAAACACCGAAAACACGGTCACAAAG 496597 32 100.0 33 ................................ CTGGCTGCCGGCAGCAACCGTGTAAAGAGTCCC 496662 32 100.0 35 ................................ GAATTGAGATACTTCGCGCAAAGTCACCCAATGGT 496729 32 100.0 35 ................................ TCAAATAATCCATTTTTATCTGCATGAACGCGTCA 496796 32 100.0 34 ................................ AACTTTTGTGAATCCTCCCGCGTATCCCATACGC 496862 32 100.0 35 ................................ TTCCGCGATGGCGTCTAAAACGTCGTCGATGTCGT 496929 32 100.0 34 ................................ TCTTGACGGCGTTGAAGACACACTCGATCAGCTC 496995 32 100.0 34 ................................ AAATCGTGAGCTCCTCCCGATCCCAACTGGGTCT 497061 32 100.0 33 ................................ AAGCGTCTGGAGCTTTTTCTCTGCGGTTGCCGT 497126 32 100.0 34 ................................ GGTCATTGTTTCGATAGCCGTGGAATCCCATCCC 497192 32 100.0 35 ................................ TCGCGTAGGATTGCATCGGTAACCCCATCTCCCGG 497259 32 100.0 33 ................................ GATCCTACCGCAAGATAGCAATCATCGACGTGC 497324 32 100.0 34 ................................ AGCATCGAAAAATCGAGCATAGAGTTTGCGCTCA 497390 32 100.0 36 ................................ CGTAACATCGCCACTGAGGTCTGTTGACCCTGTAAG 497458 32 100.0 34 ................................ AGTCGACTGGTAATCGATGGCCATTATGAGCCGC 497524 32 100.0 33 ................................ GGAAATCCGCTCTTGATCCCGTCAAGCATGTTC 497589 32 100.0 33 ................................ CCTACCCGGTGCTTTTTAAGGACGCGGAAGGCG 497654 32 100.0 33 ................................ CCAGAAGACATCGTCTCCATGGTGCAGGAATGG 497719 32 100.0 34 ................................ ATTGAACGCTTTACAGCGAACCCCTTATAGGATC 497785 32 100.0 34 ................................ TGATGAGCCAACCTAACAGCAAAAACAAAGGAGA 497851 32 100.0 34 ................................ ATTTTTTTTTATCCCTCTCTTTCAAACTTGAAAC 497917 32 100.0 35 ................................ AATGATTGAGAACGGTTACAAGAACATCGGTAAAC 497984 32 100.0 34 ................................ AGTGGTTATCAATCAATCAATCCGACAAAGGAGA 498050 32 100.0 34 ................................ TGATTGGCTTTGGATTTCGTTTCGCCCTTGCCAA 498116 32 100.0 34 ................................ AAATTTATCAGGGAATTCAGCAACATAAGCGAAA 498182 32 100.0 36 ................................ CCCTCATAAGGCACCGGATCTCGGGTGCTATAGGTC 498250 32 96.9 34 .......A........................ TGATTTCTTACCTTCGAGGATGATCTTGATGTAG 498316 32 100.0 34 ................................ CAGGGTAGCTATGATGTATCTGTGCTCGAATCCA 498382 32 100.0 34 ................................ GCTGCAAGATTGAATCAATCGGGACGCTTGAGAG 498448 32 100.0 34 ................................ TACGATCTTATGACCGGCAAGGACGATGTCTGGT 498514 32 100.0 33 ................................ CGGATGGTGTCCAAGCCGTTGATGACGGCAATC 498579 32 100.0 33 ................................ GATATTGTCCACCCACCAGAACGCCAGTGGGAC 498644 32 100.0 33 ................................ CGCTACCGGGACTATAACGCAGTCTGGGTCTAA 498709 32 100.0 34 ................................ TACGTCCATATCACCTTAAGACCGGCCGAATTAC 498775 32 93.8 90 .................G.......C...... ATTGATACGACAATGATTTATGTGCGGGCCAGGCTGTCGGCCCTCATCACGAGGGCGTTTTTGTACGGGCGAAAAATTTTTCGCCCCTAC 498897 31 81.2 35 .G.-.C...A.........T..........T. AGGTCGCCGGCGGCGGACAGCAGGAAGGTTACGAA 498963 32 90.6 0 .........C.....A.G.............. | ========== ====== ====== ====== ================================ ========================================================================================== ================== 49 32 99.2 35 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC # Left flank : TTATGATGGTGCTTGTCAGTTATGACGTGTCGACGATTGATGAGGAAGGACCGGGTCGTCTGAGGCGGGTGGCCAAAATCTGCAAGAACTACGGTCAGCGTGTGCAGTATTCGGTTTTCGAATGCATTGTCGACCCGGCGCAATGGACGGTTCTCAAACAGAAACTGACTGACCAGATCGAAACAGGCACCGATAGCCTCCGGTTTTACTTTCTCGGGGCCAATTGGAAAAATCGCATCGAGCATGTGGGCCTGGAGAAAAGCTTCGACCAGGAAGGTCCCTTGATCGTGTAAACGCAATTTGAGCTCCAATAACACCCGATGCGAACCCCAAACGGACAAGATTTTACCGGGATGTTCGCGTTGTCGTTTATCTGACTGATTTAAATGCAAATAGAAAAATGAGGGATTTTTTCAGTGAGAACTTTAACGGCCTTGAAACGTCATATCGCGGATGACCGCAAGATTGTACCTATAGAAACAGGACGTTAAAGTGCAGCA # Right flank : CTTGAATGGCGGACGTTTACGCGTTGTGTTGGCCACAACGCCGGGTCTACCAAAGCGTGCGGATCGGATACTGCCGGATGAGGGAGTCGGGTGTCAGGATAGTTAACGAACGTTCAATAGCCTGGCATACCAACATGCGGTCAAATGGATCCTTTTTCAAGATTACCCAGAGAAAAGCGCAGGTATCCAGAAGGAAACTCATTCATTTCGAGCTGTGCGGACGAAGATATCTTAAATGGTCAAGCAGCTAAGCTAAATTTTACTTCCTTATTGCTGAACCAATTGTGATATTCATCGTTGATTTTCAAAGTTGTGATAATAGCCAGATTGAGGGAACCTTTCTTCGCCCAACTCATTCCGTTCTTCTTTTGGCGATTTGAAACGACGAGGTCGTTCATCTTTTCACCCACATTACTTGAGTTCCGAAGATTTAACCGTTTGCGCATATCATAGTTGGGAATCGAGGATTTATTCCGACCCAAATAGTCAATGAGCTTTTG # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 2815971-2813832 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021879.1 Desulfosarcina ovata subsp. ovata strain oXyS1 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2815970 37 73.0 36 AGCCCC.TG....T.T..................... CGGTATGCCTTTAATGCTGGTTATTGGCATGGAGGT A [2815954] 2815896 37 100.0 37 ..................................... GTACCAATGGCCGACCATCAGCATCCCGCAAATAAGG 2815822 37 100.0 35 ..................................... CCGCATTGTATTACACCGGGTTACAGGATTCAAAG 2815750 37 100.0 37 ..................................... TGGTAAGGTTTTTCTCAACCGTTTATCCAGCAAAAGT 2815676 37 100.0 36 ..................................... GGTATCAGTTTAACCCTATCCCCCTTGATAACAATG 2815603 37 100.0 35 ..................................... TTAACCGCCCCGGAAACCACCTCGGCACCGGTCAT 2815531 37 100.0 35 ..................................... AGATCCAACGCAGTCTTTACAGCATCTGATGATGG 2815459 37 100.0 35 ..................................... TTGGTACTTCTCTTCGGGCCACATACCAGCTTGGT 2815387 37 100.0 35 ..................................... CCGATTGGGGAAACCGGTAACGGTCTCCAAGGTCT 2815315 37 100.0 36 ..................................... TCCGCATCTCTTGCGCATTCGGCATCACACATGACA 2815242 37 100.0 36 ..................................... AGGATACATCATGCAACCCTGCCCAAAATGCAAAAA 2815169 37 100.0 35 ..................................... CCCAAACAACCTGCTTGCCAGTAACGGCGCAAAAT 2815097 37 100.0 35 ..................................... ATGGAATGATTAACTGAGGAGTAAAAATGAAAAAA 2815025 37 100.0 36 ..................................... CCATCCCTATTGAATTGAGTCTCATAGGATTCCAGA 2814952 37 100.0 34 ..................................... TCCAAGGATTTCCCGCCCCAATCTTCCCGGCATA 2814881 37 100.0 35 ..................................... TCACCGATGCTGTCAGGGGCGCCTTGAAAGAAAAT 2814809 37 100.0 36 ..................................... CCATCCCTATTGAATTGAGTCTCATAGGATTCCAGA 2814736 37 100.0 35 ..................................... TTTGTACTCGGGTTCCGATACCGCAACTATCCATT 2814664 37 100.0 35 ..................................... TTTCCGTTAAATACTTTTTCGGTCATTTCGGTGAA 2814592 37 100.0 35 ..................................... TTCACATATTGTTTTTACTGCCGATATGGTTGAAA 2814520 37 100.0 34 ..................................... GTGACAAAGGGTGGCGAGACTGTTTTGAAGGCCA 2814449 37 100.0 36 ..................................... ATTCAGGCGGTATCCCTCCGGTGATGATATTCCTGG 2814376 37 100.0 37 ..................................... TGGAAATGATTGGAGTGTGGCCCGCAGATAAGACATG 2814302 37 100.0 35 ..................................... TTAAAGACGTTTCAATAGCAATGAATGCTTCCGGT 2814230 37 100.0 34 ..................................... CCATTACGGTCGGATTGCAGGAATACATATCCGG 2814159 37 97.3 36 C.................................... GAATCCTCTTCCCCCCTCTTTGGTGTAGAATGCCTC 2814086 37 100.0 36 ..................................... AGCATGGGGAATGGTGTAGCACCTCCGATGGTTCAT 2814013 37 100.0 35 ..................................... ACAACAACGATAAGCTTGTTGGACTCACGCCTTTG 2813941 37 100.0 36 ..................................... TCAGTATCCCCACCCTGGAAGGCACTCACCGGGCCG 2813868 37 97.3 0 C.................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 30 37 98.9 35 GTTGAAGAAACCGATCCAACAAAACAAGGATTGAAAC # Left flank : CATTTGATCCGAAAGGCCAAGGCGTTAATCGAGAGTAGAAAACTCAACGAAAGGCGAGGCGGCAAGTTAATTTTGGCACATTTGAATACCCTGATCGAATTTTCAAAAAACAAACCGCCACCTTTAAAATGGGAGCGTTTTTATAACTCCTTGTTGCTCATCCTCAGCCTTTTTGAAGACGACACCGATGATGCCGGACGCCTGGCCAGGCAAATAATACGAGAAATTGACGCATTGTGGACCTTTCTCGAACATGATGGCGTCGAACCCACCAACAACCGTGCCGAACGCTCTCTGCGCTTTGGCGTGCTATGGCGCAAATGTAGTCTGGGAACGCAAAGCGACAAAGGCAACCGCTGGGTCGAACGAATCTTGTCTGTAAAAGAAACCTGCCGACTGAGAGATAAAGCCACATTCCCGTTTCTGGTCGAATGCCTGGAATGTTACTTTGCAGGCATCTCTGTTGATGTGAGTTGGATCTAAGCCTCTCTTCAGCTAAT # Right flank : TGTCTGCCAGCGATAATCTGATTTTGTCTTCTTCCTGACGATCTGAAAATGTCAGGTTATCCCCGCCTTAATTTTCTTCCACAATAGGTTTAAAACCTATCTTCTTCTCTTTTTCTTCACCAATTTTCTTGCCTAAATCCGGGCCCCCAAATAATACCAACTTTTGTTACATTGGCACGTAGGAGGAGCGTGCCCAATGTCCAGGATAAAGCGGAAAAAATGTCGGCATTGCCATCGGTTATTCGTTCCTGACCCGCGAAACAGAAAACGTCAAAGGTACTGTCGCAGACCCGCGTGCCGTAAGGCCAGCAAAGCCGATAGCCAGAAACGGTGGTGCCAAAAACCAGAGAACGTTGATTACTTCCGCGGGGCGGATAATGTCGAACGGGTTCAGCGGTGGCGCGAGACCAATCCAGGATACTCGCGCCGAAAGCCCAAAACCTGCGTCGATGCGTTACAAGATCCCTTAAATCGACAACATGCAGAAAATACAGACAATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGAAACCGATCCAACAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA // Array 4 2819517-2817526 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021879.1 Desulfosarcina ovata subsp. ovata strain oXyS1 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2819516 37 100.0 35 ..................................... CCACATTGTATTACACCGGGTTACAGGATTCAAAG 2819444 37 100.0 36 ..................................... ATTTCATGTCGGTTCGATTCCAGCCCCAAGTATCAA 2819371 37 100.0 36 ..................................... AACTATACGCTTGAAGTTCTGCAGCCCATTTATCAG 2819298 37 100.0 37 ..................................... TGGGAACGGCAAGGTTTTAATGCGTTAACGACTGCTA 2819224 37 100.0 36 ..................................... TGGTAAGGTTTTTTTCAACCCTTTATCCAGCAAAAC 2819151 37 100.0 36 ..................................... CATAGAGAAGTGATAATCTGATAACAAACAGTCGGT 2819078 37 100.0 35 ..................................... AACTCAGCCGTAGCACGATCAGCCAATTCCATAAG 2819006 37 100.0 35 ..................................... TAATAGGTTCCCTCCCAGGATGCAGTCTGAAGATT 2818934 37 100.0 35 ..................................... ATAATCCATAATACTCCATACATTCTTTATACTTA 2818862 37 100.0 34 ..................................... TGTGGAAGATCCGCTGGCAGGACAAGAAAGATGG 2818791 37 100.0 36 ..................................... CCAAAATGTGGCTCGATGCGGGTGTTGACCGTTCGG 2818718 37 100.0 36 ..................................... CCGCATTGTATTACACCGGGTTACAGGATTCAAAGG 2818645 37 100.0 35 ..................................... GTATTTACCGGATAGGATCCCGGCGTAGATTTCTT 2818573 37 100.0 34 ..................................... GTGTCATGAACACCTTTCTCTATCCATGCCATAA 2818502 37 100.0 35 ..................................... TTGATCATCTCCATGGTTCACCAATCTCCTTACGT 2818430 37 100.0 35 ..................................... ACGCGAGCTTCAACGACCTCATTGTAGGTTTCCTT 2818358 37 100.0 34 ..................................... TTGAGGAACGCGTACAGGGCTGAGCCCTTAGGGG 2818287 37 100.0 36 ..................................... ATTCCCTCTGATCTACGCGAGGTGTTAAGTGCTTGA 2818214 37 100.0 35 ..................................... ATCCCTTTGAATTGGCTTTCATCACTGTGCGTCAT 2818142 37 100.0 35 ..................................... GAGCAACCATTCATGGACTCCCATGAGGCCAAGTC 2818070 37 100.0 35 ..................................... TCGAAGATCTTGGATGCCATCTTTGAGCTGGCCTG 2817998 37 100.0 36 ..................................... ATGATTACATTTATCTTCCCATTTCAAGTGAAGTAG 2817925 37 100.0 35 ..................................... CCAACTTCAGGGACAAACAACCCATCAGCATCATA 2817853 37 100.0 36 ..................................... TGATGTTAGATTGCGGGTACTTTGAACGAAAAACCG 2817780 37 100.0 35 ..................................... CCCATTAATGCTGGGCGTCGTGCTCGATAATAGCA 2817708 37 100.0 35 ..................................... TTTGTACTCGGGTTCCGATACCACAACTATCCATT 2817636 37 100.0 35 ..................................... AACATTTCCTTGGAAATGGTTGCGGTGGTGAGGTC 2817564 37 83.8 0 ............................CG..C.CGG | TG [2817535] ========== ====== ====== ====== ===================================== ===================================== ================== 28 37 99.4 35 GTTGAAGAAACCGATCCAACAAAACAAGGATTGAAAC # Left flank : GTGGATGAAATTCTATTTCTGGATGATGGTACCGCCGCACCACTTGATTACAAGTTCGCCGAGTATAAAGAAAAGCTTTTCAAAACCTATCGAATGCAGTTGGTTTTTTATGGTAGATTGATCCAGGATAATTTTAATGTTCCGGTTAACAGGGGCTTTATCGTGTATACCCGCAGTCGTAACAAGTTGGTAGAGGTCTCTCTTGCGGATACCGATTTCAAGGAACTTGACAAAACCATCGAAGGATTGTGGAATGTAATTGGCCGCTGCAGGTATCCCCAACCTACCCGATATAAGCGGCGTTGTCCGGATTGTTGTTACAGAAATATTTGCGAAAGGAATATTTAGAACAAAAACCTCCTGATATCTGAATGTTAAACATACTTTGCCGAGGTGTGATCCCATGGCTGAATGGGTAAAAAAAGTAAAATTTTGCTTTATAATGGTCGGGAAGAAAACAGACAACATACTGAAAAACAGGAGCAAATTCAAAAATCGGC # Right flank : GGTATATTGGGCGCTCAATCCGGCGCACTTTTTTCGCTCCGCTAACCTCTCGTAATTTCAACATTCCCATACAAAATCAATAACTTGTTGAAATAATTAAAAATATCTAGACTTTCCATTTCTGGTATGCTATCGTGCTTTTCATGAAGTCCGATAGACCCATTTCAGATGCCGATTGGCAAGCTACTGCTGAACCGGTACGCCAGTACATCGTTTCTCTGGAAGATGAGCTGCGGGCGATTAAAACTCAAAACGACAAGCTGGAGAAAAACAACGAGAAGCTTGAAAAGCAAAAACGCCAAAACTCGACCAACTCCAGCAAACCGCCCTCATCCGATCCGCCCTATAACAAACCCAAACGCGAAAAGCCCAAAGGCGAGCGCAAACCGGGCGGACAAAAAGGACACCCGGGGCATGGGCAAATGCTGCTAACGCCCAACAATACTCAAAATGTGATGCCCAAGTGCTGCGGTTGCGGTCTCCATTCATCAGATTGGGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGAAACCGATCCAACAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //