Array 1 72546-72252 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCYK01000003.1 Bacillus cereus strain B4080 NODE_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 72545 32 84.4 34 ....T....CT.G.....A............. ACTGTAGATCCTGTATCAGATACATAAATGATAG 72479 32 100.0 34 ................................ TTTAATACGGCTAAAGATTTACTAGCTGGATTAA 72413 32 96.9 33 ....................A........... AGTAGACAGAAGATGAAAGAAGGAGATTTCTTT 72348 32 93.8 33 ...................G......C..... CCATTAACAAAAATATAAAAAGCATACGTGCCG 72283 32 71.9 0 ....T....C.......C.....AG..AGG.C | ========== ====== ====== ====== ================================ ================================== ================== 5 32 89.4 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : GATCCGATTGATATTACTAGTATGCAGATTACGAAAATTGTAAATTCTGAGCTGGGGAAGGATAAAGGATCAGATACAATGGAGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATCAATACACAGTTAGCAGAAAAGACAGGTTTTACTAACGAAGATGCGGAGAAAATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGTATCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGCTTGTTGGTGGAAGCATAATTCAAAACTTGGCCAGTACCATTCCGTAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTGACGAACCAAAATAATTGATGACTATAACATTTTGGTAAAAGAATTAGATAGTTTAAAAGTGACGATTATTGATGGACCACAATGAAGAAAACATTAGAATGATTGAAGGAAAGCGTATTTATTAAAAAGTTAATCAACCATTTATTAAAGAAAA # Right flank : TGGTAATATGCTTGATAGTAATTTAGTGTCTCTGCTGGAGTAAGAGGAACTGCTTCAATTCATACAGCAACTAGTGTTGATTCAATTGACATTACTAGTATGCAGATTATGAAAAGTATAAATTCTGAGCCTGAGAAGGATAAAGGTTCAGATACGATGGGATGAAGCATCGTGTTGATCTTGGAGCTTATATTTTTTACGGAAGTATTCATATGCAATGAGTAAGGAATACAGATTTTACCAAAGGGGATGCGGAAAATATTAAAAATGAACTGGTTACATTGTTTGGAAATGATGGGTCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGAAGTATAATTCAAAACTTGGCTAGTACTCTTCCGCAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTAACGAACCAAAAATAATTGATGACTATAACATTTTGGTAAAAAAATTAGATATTTTAAAAGTGGCGATTATTGATGGA # Questionable array : NO Score: 6.54 # Score Detail : 1:0, 2:3, 3:3, 4:0.47, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 73421-73123 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCYK01000003.1 Bacillus cereus strain B4080 NODE_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 73420 32 100.0 35 ................................ ATTTCCTTTCCATCTTCATCCTTCCAAGGTTTTGG 73353 32 100.0 35 ................................ CTGCCAAAACAAGTGTACAAACTCCTATACTTAGC 73286 32 100.0 34 ................................ CGTTTAGTAAAAATACTATTAATGATTTAACTAA 73220 32 90.6 33 .....................AGC........ CCGTTAACGAAAATATAAAAAGCATACGTGCCG 73155 32 71.9 0 ....T.T..C.......A....GAG...G.C. | A [73128] ========== ====== ====== ====== ================================ =================================== ================== 5 32 92.5 34 GTCGCACCTTATATAGGTGCGTTGATTGAAAT # Left flank : TAAGAGATTCCAAGGGAGAAAGCTAATAATAATATGTTTTAGATAGAGGATATAGTTAATTATTTAGGATTGAAATAGATATTTCGTATTCAACGCCTCAAGAATGCTATCTGGCAAAAGAAAAAGATTGAACGATGGTACAATGAAAAAACTTGATAAGTGGATAGAGAGACAAGAGGTAGTTAATTTGTTGTAAATTATGATTTAATACATAAAGGCGATTGTAAAACTATACATTTTTGTTAATCAGTTAGGTAATAGCTATGAAAATAGGGTCGAACATATTGGTGTAAAAGAATGAATTGATTTAGAAAGTCCTTTAATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCTTAGTACATTCGCACCTAGAATTCTTATACTTTATGATGGGAGTTTATGATTTTTATACAAATTACTTTATTAAATAAAAATATTTATATACTTTTGAATAGAATTAACGTATTTGTGGTTGATTTTGAACACAAATTGGT # Right flank : GGTAAGATGCTTGATAGTAATTTAGTGTCTCTGCTGGAATAAGAGGACCTGTTTCAATTCATACGGCAACAAGTGTTGATCCGATTGATATTACTAGTATGCAGATTACGAAAATTGTAAATTCTGAGCTGGGGAAGGATAAAGGATCAGATACAATGGAGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATCAATACACAGTTAGCAGAAAAGACAGGTTTTACTAACGAAGATGCGGAGAAAATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGTATCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGCTTGTTGGTGGAAGCATAATTCAAAACTTGGCCAGTACCATTCCGTAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTGACGAACCAAAATAATTGATGACTATAACATTTTGGTAAAAGAATTAGATAGTTTAAAAGTGACGATTATTGATGGAC # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTTGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //