Array 1 32-527 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTZG01000023.1 Coprococcus sp. OM06-25 OM06-25.Scaf23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 32 32 100.0 34 ................................ TCTCAGCCTTTGAAACGAAGAATACCTCCTTGTC 99 32 100.0 34 ................................ TTATCATGATAATCTCCTTTGATAATTTAAAATC 165 32 100.0 35 ................................ CCAGCTATATGCATTTGAGTTGATAATATCAACGA 232 32 100.0 34 ................................ CACAGGACTGCTTGTGTGCCTGTCTCAAACTCTG 298 32 100.0 33 ................................ CGTTCAACAACACCAAGGCAGGCACAAAGGAAG 363 32 100.0 34 ................................ AAAGGTACGTGTTCATTTTGACATAGTAGATAAA 429 32 100.0 35 ................................ ACAAGTAGTCGGATATAAAAACCTTGAAGAAATTA 496 32 93.8 0 ....A...............A........... | ========== ====== ====== ====== ================================ =================================== ================== 8 32 99.2 34 GTCGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Left flank : TTCTGTGCTTTGTTTGGTCGCTCCGTTCGTCG # Right flank : TCCAAATATTCGGGAGGTAGATTATGGCAGCACGCCTTGCCATTCGGGAAAAGCAGTTAGAGACTTGGATTGCAAATATTAAGGACTGCAGGAACAGCGGTATGAAAACAAAGGGCTGGCTTGCTGAAAATAACATATCAAAAGATCAGTATTACTACTGGTTCAAGCAGCAGAGACTGGCAGTGTGCATGCAGTCCTCTGGTTTTCAACCAGAATTGCCTGTTAAATCGGAGAAAACACAGATAGTCAAATTGGAATGCACTGATTATCAGTTTACAATGTAAATTTATAGAATGATGATATATTAAGGGAGAAAGAGATATGAATGATAAGACAAATGCTTTAAAATCCGCCATCTACGGCCTCGCCGTAGGTGATGCGTTGGGCGTTCCATATGAATTTAAATTCAGGGGCGCATTTGAATGTACAGATATGATAGGCTACGGTACGCACAATCAGCCGGAGGGAACCTGGTCGGATGATACCAATATGGCGCTTGC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA // Array 1 169-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTZG01000022.1 Coprococcus sp. OM06-25 OM06-25.Scaf22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 168 32 100.0 34 ................................ TCTTAAACCTCCGGGGAGAGGCAAGGCGCAAAAA 102 32 100.0 33 ................................ TTTTAATCTCTTTGCGTCCATTTCTTATACCTC 37 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 3 32 100.0 34 GTCGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Left flank : TACCCTGTTTTTTTGTGGAAATGAGGTGATAAGAATGTTATTATTGATAACCTATGATGTTAATACGGAAACATCTGCAGGAAAAAATAGATTGAGAAAGGTTGCAAAACAATGTGAAAATTATGGCCGACGAGTACAGAATTCAGTTTTCGAATGTATAGTGGACCAAGCACAGAGCGTTAAATTGAAAGCCTTGTTGTCTGAAATAATTGATGATACAGTGGACAGTCTCAGGTTTTATTATTTGGGAAGTAAATATCAAACTAAAGTTGATCATATAGGATGTGATAAGGGGATAGATGTTGATCAGCCATTAATTTTTTGATGTTGTGCGTAATGATAGTGAACATAGAATTACAAGGTCATTCGCACCATGAAAAATATACAGCTGAGAAGCGTATCTATCTATATATGCATAAGAAACAGATTTAATTGTAAAAAACAATAATATTATTAAGCGGTTTTGTATAGTTTTTTAAATTTTTTTGTGCAAAATTGCT # Right flank : TATTAG # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : NA // Array 1 59447-60268 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTZG01000012.1 Coprococcus sp. OM06-25 OM06-25.Scaf12, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 59447 36 100.0 28 .................................... AGATAGGCTCATGCTTGATGATGACAGT 59511 36 100.0 30 .................................... TATAGTGGTTTCAAGCACTTTGATGTAGTC 59577 36 100.0 30 .................................... GGATTGCAATAAAACTTAATGCCCCTGTTT 59643 36 100.0 30 .................................... CTGTGGGTAGCATATGCGTGCAGTCCACTA 59709 36 100.0 30 .................................... TTATGCGCATGTATGTGCTAGCGTCTGCAT 59775 36 100.0 30 .................................... ATCGCGCCGTAGCATATATTAACACGGCGT 59841 36 100.0 30 .................................... ATAATGTGTTCGTTGATCTCGTTGATTGCC 59907 36 100.0 29 .................................... CCACGAATTTGATTTATTTGATAACCAAT 59972 36 100.0 29 .................................... CATAAAGCTTTCAACCTTTTCCACAGCCT 60037 36 100.0 30 .................................... TCGGTAGCAAAGACTTTCTGCAGGTGTGCC 60103 36 100.0 29 .................................... AATTGGAAGTATAATAGCTGTCCAAATAA 60168 36 100.0 29 .................................... CTGCCCACCACCACCATAATGTATGCCCT 60233 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 ATTATAACATACCAAGAATAAAAAGGGAAATATGAC # Left flank : TACATGGAGAAAAACATGTAATACATCATGCCATAGATAAAATGGTAGCAAGTTATAATTCTATTTTGATGGGTAATAAGGATGAACTTGAAATCCCAGAATTGATAGAGCTGGAAAGACATAATTATGAGTAAATTTATGAGATTGATTGTATTTTTTGATATTCCAACAAAGACGAAGAAGGATAGAAGATGCGCATACAGTTTCCGCAAATTTCTGTTGAATGATGGATATTGTATGTTGCAATATTCGGTATATGTTCGTGTGTGCAATGGGATGGATGCGGAAAGAAAACATGAAGGGCGTCTGAATGAAAATCTTCCAGAAACGGGTTCTGTAAGAATGTTGGTTCTCACGGATAAACAGTATTCTTCGATGAAAATACTGGTGGGAACAACAAAAAAAGAAGAAAAAGGTAGCATAAATTTGCTGGATATCATATGATTTTTTAATGTGAAAAAGCTAGGATTTGTTGAAAATCCTAGCTTTTTTGCTACCCT # Right flank : CATCGTTCACAATGCAATAGATACAAAGAAAGCCGGAACTTATGAAGTGACATATCAGGTAACAGATAGTCAGGGTGCTACTGCTACAAAGACGGTTAAAGTAACTGTTAAGCCTGCACCGGTTAATCCAGATACAGATAAACCGAATACCAATAAGCCAAGTAATGATAAAGGCAGTGTAGAAACAGGCGATAGAAATAATCTTCTATTGTGGGAAGTCATGTTGATTGGTTCAAGTATCCTTCTGTTATACAGTCTGTATCGTAAAAAACGAAAAACAAATCAATAACAACTTATGAGGGTAGTTGCCTAAATACAGGCACTGCCCTCTTTTCACAAGAAAGCCTTTTTGAGTTAATTGGAGAAAGTGTTGTTCATGGGGCCAGGCACCAATGGTGCTGAGTTAATTGGAGAAAGAAAAAAATATTTACACTGAATATTTTAGCCTTTTGGGGCTATAATTTTCAATGGCAACTTGAAAACCTGATAGAAAACACATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAACATACCAAGAATAAAAAGGGAAATATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 49-977 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTZG01000037.1 Coprococcus sp. OM06-25 OM06-25.Scaf37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 49 32 100.0 34 ................................ CAGATACCGAGATATTACGATGGCATAGACCTTT 115 32 100.0 33 ................................ AGTTAATATCCGATATACAGTTCTTACAATGTT 180 32 100.0 35 ................................ CTAGTGGGAGTTATACGGTAGGTGGTAATACTCCT 247 32 100.0 34 ................................ ATATGGCAGGATAAAACATATACATGGTTTTGCA 313 32 100.0 34 ................................ GTACGTTATTTTGTCTCCCTGTTCGGCAGTTTCA 379 32 100.0 33 ................................ TGCTATAGCTGTCGACTTGATAAGGGAGCTTAT 444 32 100.0 33 ................................ ACAAGTGCCATTGTCAGCCTACGACGTTAGCGC 509 32 100.0 36 ................................ GATGAAGTAGGTGCGATTTGGAACAGCCGAAACTAT 577 32 100.0 37 ................................ GATATTAACGTAATGCTTGTAAGTATCGTAATTCATC 646 32 100.0 33 ................................ TTCCGCTCATTCACTATCACTCCTACTTAAACG 711 32 100.0 34 ................................ CGCTAAGAACTTATCCCAATCTTTTATTGATTTA 777 32 100.0 36 ................................ ACTGTATGCTTCAAGAAGCTTGATAGTGAGGGTAAC 845 32 100.0 3 ................................ AAC Deletion [880] 880 32 100.0 34 ................................ AATGCCTATGCCTAACTTGTTATTTGCATCTGCT 946 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 15 32 100.0 32 GTCGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Left flank : CGTGGATTGAAATTACAAGGACAGAAGAGATTATACATACCATAAGAGG # Right flank : CTGGATGAAGCACTTAAGGATGGCAACATGGATGACGTCGCTCCGTTCGTCGGAGCG # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA // Array 1 36-648 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTZG01000041.1 Coprococcus sp. OM06-25 OM06-25.Scaf41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 36 29 96.7 0 .............................- - Deletion [65] 65 30 100.0 36 .............................. GCGTTGGAGATTGATGATGAGGAGGTGAAAGAGAGT 131 30 100.0 39 .............................. TCTTCACAATATACGCTATGTGGGCTTTGTAGTCAACGT 200 30 100.0 36 .............................. TAGCATTTGATAAGTGGCTAAAGTGTGGAGGTCAGT 266 30 100.0 36 .............................. AAACTCTGAACAGTGCGTTTTTTTCTTGTACGGCGT 332 30 100.0 35 .............................. AAAATGGGCGAAAGAAAACAATGAGTACGAAATGT 397 30 100.0 17 .............................. TTTTAGGATAAAGGAGG Deletion [444] 444 30 100.0 35 .............................. TTTTAGGATAAAGGAGGTATAAGAAATGGATGCGT 509 30 100.0 35 .............................. TCCCACAAGCGTATATTGATGCAGTATCAAAAGGT 574 30 100.0 15 .............................. GCAGTATCAAAAGGT Deletion [619] 619 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 99.7 28 CGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Left flank : ATCAGAAGCGGAATAGGAGAGAATATGGAAAAAGTC # Right flank : AACCA # Questionable array : NO Score: 8.68 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.56, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : NA //