Array 1 18968-26825 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOHR010000034.1 Clostridium perfringens strain 1805-168 NODE_34_length_29685_cov_73.5797, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 18968 29 100.0 37 ............................. CTAGGACTTAATAAAGTAGGTTGCCTCTTACCTAAAG 19034 29 100.0 36 ............................. CTATTAAAACCACACGCTTTAGCAAAAATTGCTATT 19099 29 100.0 36 ............................. GATCTTGTAGCTGGAATATTTAATCCAGCTTCTTAA 19164 29 100.0 36 ............................. TTACTAAAAATCCATTACGAACAACTGATATTTCAA 19229 29 100.0 37 ............................. TTAACTATGTTTAATATGTTTTTGGGAGTTTTGGATG 19295 29 100.0 35 ............................. CCTACAACATTAAGAGATTTAAAAGAATATTATAA 19359 29 100.0 36 ............................. GAAAATGTGTAATCCTTATAATTCTTATAGTTGCTG 19424 29 100.0 35 ............................. TTACTTAATAACTTATTAAAGTGGGTTGAAAGTAA 19488 29 100.0 36 ............................. GGAGTTTGGTTCCAGCAAAACGAAAAGATTAGGTTT 19553 29 100.0 36 ............................. TTTTAGGAGGTTTGACAATGGATGAAATAAGATATG 19618 29 100.0 36 ............................. AGTGCATTAGTTATATTTGGAGATGTAAATAATAAA 19683 29 100.0 36 ............................. TAAAAAGGGAGGTGTTAGTTAGTGGAAATTTTTAAA 19748 29 100.0 36 ............................. TATTAACTCTTTCTAATAAAACCTTTTCTCTTTCAG 19813 29 100.0 36 ............................. AACTAAAAATCCCTTCAATTCCTTCTACTAAAAAGG 19878 29 100.0 36 ............................. GTTCTATGGTTTTAAGATTTTTACTTAATCTTATTT 19943 29 100.0 36 ............................. GTGTAAATAAATTAGCTTATTAGCTGATAAAAAAGG 20008 29 100.0 36 ............................. TAGCATTTTCATGAATAAGATATTTAAGCATATCAG 20073 29 100.0 35 ............................. TTAACAATGATTGGTGCCAATTCACTTTCTATTAC 20137 29 100.0 36 ............................. ATTAGTGATGTTGCTTCTACTGTTCCTAATGTTCAA 20202 29 100.0 36 ............................. TTTTTCGTGGCTTAATTTTCATACGTCTGTTAACGT 20267 29 100.0 37 ............................. TTAAAGAAATTGCTAATAAGAATATTATAAAGTTTCT 20333 29 100.0 36 ............................. TGTTCATCCCTCTAAAGTAATATGATGTGATTATCT 20398 29 100.0 37 ............................. ATAGGTAAAAGTGTTGTAAGATTGCTAGTAACAGCAG 20464 29 100.0 37 ............................. CTATAGGGGCTAGCTTAGGAGATATGCAACGTAATAG 20530 29 100.0 36 ............................. TAGGAAAAACAACTGATAATGTTGTTGGTGGCAATA 20595 29 100.0 37 ............................. TTATAGTTTTTAATAGTATTGTTAGTGCTTGCTGCTG 20661 29 100.0 36 ............................. TTTCTGGAATAGTATACATTTCGCCTTTACCTGTTA 20726 29 100.0 36 ............................. TCAGCTAATTCAGAAAGAATGGGATATGTTAAGAAT 20791 29 100.0 36 ............................. AAGCAATCAATGCACTGAAAAATATTCACAATTTAA 20856 29 100.0 36 ............................. TGAACTTTCTCAACAGGTGATATATAATCATCATAT 20921 29 100.0 36 ............................. GGAACAAAAGAAATAAATAAAGGCAATCTTAATATA 20986 29 100.0 36 ............................. AAAAATCCAAATATACCATACAAATGTATTTTTTCT 21051 29 100.0 37 ............................. AAGTTAACTAAAGCTTTTCTAGGAGAACCAATTCCAC 21117 29 100.0 37 ............................. TCAAAAGTATGGTCAATTACTTGTTTATCAACATTAG 21183 29 100.0 37 ............................. GGTTAGTTAATGCATAAGCTATTTCCGTAAACTTATT 21249 29 100.0 37 ............................. CACAACTGAATTAATTGGCCTGCTTCTTGAACACTCA 21315 29 100.0 36 ............................. GTAGCTTCTTTTAATATTTCTCTCCAAGAAACCACC 21380 29 100.0 36 ............................. TGACTAAATCTTTCTTAAATTTAATTGAGACTAATC 21445 29 100.0 35 ............................. TTATTCCAATTCCGATTGGAAGTAAAGTAGTAAGA 21509 29 100.0 36 ............................. TGGTTATTCCAGGATTCAGAATGCCAATAATCCTGG 21574 29 100.0 35 ............................. CCAAGCGTAGCATTGCATGTAGCTAATGTTGGATA 21638 29 100.0 37 ............................. TTTGAATAGATACATCATGAGGGTAAATTCTAGTACC 21704 29 100.0 37 ............................. TATCTACATTTTGCTTTACAAGTTCTAAATCACTATC 21770 29 100.0 36 ............................. ATGGGAGAAGAAAATAAAAAGTATTATTTAAAAGCT 21835 29 100.0 37 ............................. CATACGGGGCAAAAAAAATTAGTTTATGATACAAATC 21901 29 100.0 36 ............................. ACAATTATGGGGGGGAAAGGCTTTATGCCTTCCCCC 21966 29 100.0 36 ............................. TAGATTAAAAAAAATGTATATACATTTTGTATATAC 22031 29 100.0 36 ............................. TTTTAAAGCTTTGCAAGAAGTAAGCAGAACAACAAT 22096 29 100.0 36 ............................. TTTTGCATCTCATCTATTAAATTCACATTATTTTTG 22161 29 100.0 37 ............................. TCCGCTAAGGCTATGAGATACTTAAACAATGATTTAG 22227 29 100.0 36 ............................. GATATGATATTCTTAAAAGTTCTATAAATTCAACTT 22292 29 100.0 37 ............................. TCTTACTTATTTAAAACTTTAGAAAATCTAATAAACA 22358 29 100.0 39 ............................. TATATGAGTAATATAAAAGTGAATTTCAAGTTTCTATGT 22426 29 100.0 36 ............................. AGTAATATAGCTGATTATTTACTGGTTAAAAGAGAT 22491 29 100.0 37 ............................. TTTTTCAGGTATCTAACTAACTCAACAGTATTATCAA 22557 29 100.0 36 ............................. ACTTTTACACTTTTTTAACACTTTTTATCACTTCTC 22622 29 100.0 36 ............................. TTACTTTTACTTTTCTCATCTAAAGCTTTTATATTA 22687 29 100.0 36 ............................. TAACTTCTATAAGTTTTAACTGTTCAAATAAATCAA 22752 29 100.0 37 ............................. TTATATGCCTCATAGTGGAGAATGTGCATATAATTGT 22818 29 100.0 35 ............................. TGTTTCTGTATATTCAGGAAATAGATTAACTGCCT 22882 29 100.0 36 ............................. CTAATTTCCCTTAATGTCTTATCTACTTTAGTTCCA 22947 29 100.0 38 ............................. TAAATAATTTTTAAAATAAGAAAAGGACCTTTACGGTC 23014 29 100.0 37 ............................. GCTGAAATACTAAAAGGTAGCATACTTATTGGAACAT 23080 29 100.0 37 ............................. TTATTTCTATATAATCAAATTGATTAATAGTAAATTG 23146 29 100.0 36 ............................. GTTTCTTTGGATAATGCTCCAAAGGTTATTCCTCTT 23211 29 100.0 36 ............................. TTTACAGTTGCTACGCAACATTCTTCAACTGCTCCA 23276 29 100.0 36 ............................. ATTGCATAGCAAGGAAACACAGGATTTATTAAATCG 23341 29 100.0 37 ............................. TTTTTTATAGCATTATATATAGTGTTTTGTATAAGAG 23407 29 100.0 36 ............................. TAAAGAAAGTACCAATAAATTTATCAAATAAAGTTT 23472 29 100.0 36 ............................. AAGGAATGGACCTGGTTTGAGCGTGGTATGGAATTT 23537 29 100.0 36 ............................. TAATATTGAAGGTTTTTTGCAAAGGTTTCTCTTACA 23602 29 100.0 37 ............................. CCAAAAATCATTTAAAATTAACATTCTTATAGAATTT 23668 29 100.0 37 ............................. AAGCAATAGCAACTCTTTTATTTTTTAATACTGCTAA 23734 29 100.0 36 ............................. TCCTGTGCATCATAGCTTCCTGTTTGGATTCTTCCT 23799 29 100.0 36 ............................. ACATTTTTTCTACACTTATAATCCCATTAAAATCTG 23864 29 100.0 36 ............................. AAAAGTTGTACTGTATTCATAATTTTTCTCCTTTTT 23929 29 100.0 36 ............................. TTCTAAATAAAAAAAAGAGTAGAAATTAATCTACTC 23994 29 100.0 36 ............................. TTTTCTGTAACGGATTGTACTCTTACTTCAATTTCA 24059 29 100.0 37 ............................. TAACAGCTATTTTATTTGTTAAATCTATTCTTCTTTT 24125 29 100.0 36 ............................. AAAAATATATGACAATAAGGAACAGCTCTTTTAATA 24190 29 100.0 36 ............................. CAAAAATAAAGACCATATCCAACGAATTTATAAAAC 24255 29 100.0 36 ............................. CAAGCTAAAAAGCTCTATAAAGAAACTAGAGTAAAA 24320 29 100.0 36 ............................. GCTTTTAAGAAGGCATATATAAGAGCTTTCGATAAG 24385 29 100.0 36 ............................. ATATTTCCTGGATATTGTTGTAGTCCTTCTATCCCC 24450 29 100.0 35 ............................. GCTAAAAATTACGTTGGCTTTGAGGTGGAAAAAAA 24514 29 100.0 37 ............................. TTACAAGCTTAAAGAATTACTTAGATTCTTCTCTTAA 24580 29 100.0 36 ............................. TGTATTTTGTTGCAAGTAACATTTGGGTTAAAAGTT 24645 29 100.0 36 ............................. ATCTTTATCATCTTCGGTTCTTTCAGATGCTATCAT 24710 29 100.0 37 ............................. TTATTCGTTGTTGTAAACCCTTATTTTAAATTTTTTT 24776 29 100.0 36 ............................. TGTAAATGCTCTCTCTCTTATATTTAATCCAGTTCT 24841 29 100.0 35 ............................. GCTAAAAATTACGTTGGCTTTGAGGTGGAAAAAAA 24905 29 100.0 36 ............................. GATTCAGATATAACTGTTCAGTTACCAGATGAATAC 24970 29 100.0 36 ............................. ACTAAAAAACTTAAAAAAAGAAACAAAGGTTTAAAC 25035 29 100.0 36 ............................. AAGGTGTAATATAATCATCAAAAAGGCTTTCAGAAA 25100 29 100.0 35 ............................. ACAGAATTATATTTAACTCTAGGGCAATTAAGAAA 25164 29 100.0 36 ............................. TCACTTTTAGAAGCAGGACTAACAATAAACTGTGCA 25229 29 100.0 36 ............................. CCGTCATTGCCCAAGATAGTAAAAACAAAATACTTC 25294 29 100.0 37 ............................. TATTCTTATCAAATAAGAAAGGATGAATGTTTAGATT 25360 29 100.0 37 ............................. GAAAAGCTTCGTGGAGATGTTTGTGTAATAGATGTAG 25426 29 100.0 36 ............................. TTAAGTCTAAATGCTTTGGCCGGCGTTAACTTAACA 25491 29 100.0 36 ............................. TTGCTCTTTTGCTCTTCTAAGAACTTTATAACACCT 25556 29 100.0 37 ............................. ACGCATAATGACACTATATACATAATACAAAGAAACA 25622 29 100.0 37 ............................. GTTGTAAAATCAAATTCTCTTTCAAAGATATCTCCTT 25688 29 100.0 37 ............................. TCAAATAAAGTAGTACTTAATAGAGCTTTATTATTTT 25754 29 100.0 36 ............................. GCCATATGGAGATGACCAAAGAAATGGTCTAGATCA 25819 29 100.0 35 ............................. TCAACTCTATATTTAATTAAAGTAGAACAAGAACT 25883 29 100.0 36 ............................. TACCAAGCAAGCCATAAAGGATAATTTACTTCATTA 25948 29 100.0 36 ............................. TGACTAGCATTAGTAATATTTAAGGCTAAGATATTA 26013 29 100.0 37 ............................. TTCAGGATGTTGAGATTTAAGAACACGACAATCAGGG 26079 29 100.0 36 ............................. TATGGATTTATGACTGGAATGTTTGCATGGTTTTGT 26144 29 100.0 36 ............................. TTATTCACACATCAATGACAGATGTTCTTTTATCCC 26209 29 100.0 36 ............................. TGTCCTAAATTAGATATTCAAATTGAAGAAGGAACA 26274 29 100.0 36 ............................. GTGTTCATTATTACGTTGATGATACTGGAGTATATC 26339 29 100.0 36 ............................. CAAAAACACCTTTTAAAATGACAGCTTACTGTGAAA 26404 29 100.0 35 ............................. CTATTAATGATATATCCGGATAGGCGGGGTTGAAT 26468 29 100.0 36 ............................. AGATTATGCAGCACTTTTTTTGCTTGAATATCGTTT 26533 29 100.0 36 ............................. TAAATTCATCTATAAAAAAGTTGTCTGAAGGAATTA 26598 29 100.0 37 ............................. TTTATTAATTTCTTAACTATATATTACTACAAACGTA 26664 29 100.0 37 ............................. AAATAATTAGCAACTTCATTCTTAAATCTTTTAATAT 26730 29 100.0 37 ............................. TTGCTTTTTAAGACACATTCTAAATATGTGCCTTCAT 26796 29 86.2 0 .................GAA....C.... | C [26823] ========== ====== ====== ====== ============================= ======================================= ================== 121 29 99.9 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTTATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACATTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTTAGCATTTTAAAATTTGGG # Right flank : TATATAAAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATGAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAATATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAATATATATGGTAACATTAAGTTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAGAAAAATAAACAAGATAAGTAATTTAAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGCTATCTGTCCATTTTTACTTAATTATTGATATATACTTGTTAAATTTAGAACTTTGAATCTAATAATCTATACATTTAGCAGTTTACATCTAATAGCTCCCTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //