Array 1 17745-16922 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AFOG01000063.1 Escherichia coli O104:H4 str. TY-2482 Contig63, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     17744	    29	  96.6	    32	............................A	GGAACTGGCGCTGCTGGAGCAAAACCCGGTAT 	
     17683	    29	 100.0	    32	.............................	AAAAGGGCCGCATTGACGGCCCTGTGTTATCG 	
     17622	    29	 100.0	    32	.............................	TTAGCTGTTAGCCAAACATGTCGACCTGTTTG 	
     17561	    29	 100.0	    32	.............................	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA 	
     17500	    29	  96.6	    33	............................C	GTATTCCCCCAGTCACCCCCGCCACCAAAATCA	
     17438	    29	 100.0	    32	.............................	ATTTTTCAGACTCATCAAAATAATCCTTTAAT 	
     17377	    29	 100.0	    32	.............................	CATTGCCTTTGCAGCGTCTTTCCGATCATTCA 	
     17316	    29	 100.0	    32	.............................	AACGTGAGATACGCCTCCCAGCGGCGCTCGGT 	
     17255	    29	 100.0	    32	.............................	CCGTCAAACAGTATCACCGCGTTAACGCCCGC 	
     17194	    29	 100.0	    32	.............................	CCACACACGTCGAGCTGGTGGGGGTTAATGCT 	
     17133	    29	 100.0	    32	.............................	ACACCTCTACTGACGTTCCTGAACAAGAAGAT 	
     17072	    29	 100.0	    32	.............................	AAACCGGACGAGGGCGCGCTAAAACGTGATTA 	
     17011	    29	 100.0	    32	.............................	CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 	
     16950	    29	  93.1	     0	..........T.................A	|                                	
==========	======	======	======	=============================	=================================	==================
        14	    29	  99.0	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA
# Right flank :  CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATATTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATGTTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [2-2] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.24   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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