Array 1 767436-766344 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082196.1 Mycoplasmopsis synoviae strain A4 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 767435 36 100.0 30 .................................... TAGGTTATGTTATTAGTAAAAACAACCCAT 767369 36 100.0 30 .................................... TGGTAAAGCCTCCGATGATAGTATATTAAA 767303 36 100.0 30 .................................... TTCGCAACTCTAAAGTTTTAATCCGTGACG 767237 36 100.0 30 .................................... CTTGGAAGATTTTTTAGAGTTAGTAAAGAT 767171 36 100.0 30 .................................... CTATAGAGCAATTAGAGAGTCGTGATTATA 767105 36 100.0 30 .................................... TTTTGTAACTAAGCATGATGCTAGGGTACA 767039 36 100.0 30 .................................... TAAAAAATTTGGCGGTAAATAGTCATATAT 766973 36 100.0 30 .................................... TCATAACCTAAATTTGATAAATGGTTGATT 766907 36 100.0 30 .................................... CGGTTTTGATAAACGGAGATAGTTCTATTG 766841 36 100.0 30 .................................... CGTCACGCTTCTCTGTTAAATAGTCGGTAT 766775 36 100.0 30 .................................... TAATACACAATCAAAACAATGAACAGAAAT 766709 36 100.0 30 .................................... TAGAGTACTTTCAACACTATTGACTAGTAT 766643 36 100.0 30 .................................... TCAAATACACTAACAGCATAGAAAGGCTAA 766577 36 100.0 30 .................................... AATTTTCCCGCAATTATTTTAACCTCCCTA 766511 36 100.0 30 .................................... TCGTCGCTACCTTCTAAGTCGTATATTCCT 766445 36 100.0 30 .................................... TTAGTGATGGTGATAGTAGATATAACATAT 766379 36 97.2 0 ...................................C | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 99.8 30 GTTTTGGGGTTGTACAATTATTTTGTTAAGTAAAAT # Left flank : ATGAAAAATTAGTTTTAGAAATTAAAAATTTATTAAACAATAAAATAGGTTTTGAATTTGTATCTATTGAAGAAAATAATTTTAAATATTTAAAATATTTATTTAATTTAGAAAACGATAAATTTATTGATAATAAATCTTTAATAAAATGAATGGAAAATCAAAAATATAATAATCAAAAAATAAATTTAATTATTAAAAATTTTGATTTTGTTTTAATAAATGAATTAATTAAGTTTTCAAATAATTTTAATATTATTGTTTTAACTAATGATTTCTTTAAACATATAAATAATTTTGATTATATAGAAAGCGTTGCTTTTACAAATGAAGATCTAAATAGAATTGTTTCAATTGAAGAAAAAGATTCATTTGAATATTTTTTAGAAGAAATTTTTCAAGATTCTATAAGAAATATTGAAAAATTTGACTTTTTTTCACAAAACAATAAAGATTTAATAAAAAAATCATTAAAAATTAATTTTTTTTAATTAAATGCG # Right flank : ATTAGCCCCACAATTATTTTAACCTCCCTCATATTAGCACACTAAGATCTTCATCTTTAAAAGCGGAAATAAAATTACTTAGCAAAAAAATGGATAAAAGAAAAGCTGTTTCAATGGAAAAAATAACAAATCCTGATGAGTATAAAATTATTGAACATGTAAATCCATTAGGGATCAATTTAAACTGAACTAAAAAATTAGAAAATAATAATTAAATTTATTTTTTTGTTGTATAATGTTATCGTATATATTACTTACTTAACAAAATAATTGTACGATTCCAAAATAAGGCGCTTATGTAAGATGCAATAATGCACTTATATAAGCTGCCGTAAACGCCGAGGTAACTCGGTTTTTTTTATACAAAAATTATGGCAAAAAAAGTTGTTGAAATAAAAGAAACAGAATACTTATTTTTTCATTTAAATTCTTTAATTGTAAAAAAAGAAAACAACAAAATTGTTTTACCGTTGTCAGATATAGATACTATTTTAATTTCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGGGTTGTACAATTATTTTGTTAAGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //