Array 1 1354955-1353137 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT906439.1 Streptococcus merionis strain NCTC13788 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1354954 32 100.0 33 ................................ GATTTTATAAGTTCAATTAACCCAGCTTATCAA 1354889 32 100.0 33 ................................ TCGGTGTCATAAACTACCTCCGAAACTCATTTT 1354824 32 100.0 36 ................................ TGCGGTGGCTAGTACAGCATTGACCGCGTATCTAAA 1354756 32 100.0 37 ................................ ATCTGGTTGATGTATGGCCGCAGAAAGTCCGGGAAAC 1354687 32 100.0 33 ................................ CAATTCAAGAGACGCTATTTTGAAACATGTTGA 1354622 32 100.0 34 ................................ AAGAGTGATTTCCATTTGTCCATGAAAAACTTCG 1354556 32 100.0 35 ................................ AGGCCAAGTATATGCTCTCAGGTATCGCTCAATGC 1354489 32 100.0 35 ................................ CCAATGCTGACGTGACGATAATTTCTGTGATTTGA 1354422 32 100.0 34 ................................ AAAGTAATCGTTACGAGACTAAGACTATTACCTT 1354356 32 100.0 33 ................................ AAGTACATATCTTGATGATACATTAGGATTTGT 1354291 32 100.0 37 ................................ TCGTTCTAGCTGTGCAAACACTGACAGGACTCCGACC 1354222 32 100.0 35 ................................ CCTGATACAGCTATCATGAGTAAAGACTATCAACA 1354155 32 100.0 35 ................................ TGCTGGCGGATAATCTATAAAGATGTCCTCGTACT 1354088 32 100.0 34 ................................ GGAACCAACATTAAAGCCTAAATCGACATAGACA 1354022 32 100.0 36 ................................ CCGTAATGATAGCTTCATTATAGCACAGGAGGCTAC 1353954 32 100.0 33 ................................ ACTATTCGAACTAGGTTAAAAACAGACTAAACC 1353889 32 96.9 33 T............................... AAGGGGCTTTTGATGATGAACCACCTAGACCAT 1353824 32 100.0 33 ................................ GGGTCTTACGATATTTTTTATTTGATAAGTCAT 1353759 32 100.0 34 ................................ GGAACAAGTCGTTGATGTAGCTGATGCGAATTGG 1353693 32 100.0 34 ................................ TCAATGAGCTATACATTGAAGCACTTGGTGGCAA 1353627 32 100.0 33 ................................ TTGCCAGCGTCTAGCAAAGTCGTCCATAGGCCC 1353562 32 100.0 33 ................................ TCTCCTTTATGGTATAATAGACACAGGGTATTT 1353497 32 100.0 33 ................................ GTCTGCAAAGTTCCAGCACTTGTCGCTCCGAGG 1353432 32 100.0 33 ................................ AGTACCAACTGGATCTCGAAATGGTGGCGCTAG 1353367 32 100.0 33 ................................ ATTTTGGCCAGATTGTCCATTGCCTGCAACTTA 1353302 32 100.0 34 ................................ TAGGTTGCTTTTTGCGAGGTTCCCAGCTCGTTTT 1353236 32 100.0 35 ................................ GGCTTGTAAACTTGTGCTAACTCGTACATAGATAG 1353169 32 78.1 0 ...........T.........C.....TCGCC | T [1353141] ========== ====== ====== ====== ================================ ===================================== ================== 28 32 99.1 34 GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Left flank : TAAAGCTATTCGAGGAGACTTGGACGCTTATCCGCCGTTTTTAATTTAGGAGATTTACGATGATGGTCTTGGTTGCTTATGATGTAAACACAGAGTCGGCAGCAGGTCGAAAGCGTCTGCGCCATGTTGCGAAACTATGTGTTGATTATGGTCAGCGCGTGCAAAATTCTGTTTTTGAATGTTCAGTGACACCAGCTGAATTTGTCGAAATTAAAGATCGTCTGTCCAAAATAATCGATATGGAATCAGACAGCATCCGCTTTTACCTGTTAGGCAAAAATTGGCAAAATCGTGTTGAAACGATGGGACGCGATGACAGTTACGATCCTGATATAGGGGTTTTGCTCCTTTGAAAAATACTTTGCGAACCCTTGTTACTCATAAAAGTACGGGAGGTTCGCGCAAAAAAATAGGAAAAATGGGTCATTTTTGCAGTTTTAGAAGCTAAAAAGTGCTTTCTAGATCGCCAATGTGGCCCACAAACGGTGTCTCTACGCGCC # Right flank : TAGTAAATTATGCTGTAAAGTTAAAAGATGATACGTTGTTTTTTAGAATTTGGCGCTTATAGTCGTTAAAGTCAATATATTGAATTTATCATCTAAAGTGTAAGTCTCTCGCTTTCAAATCGTTTCCATTTTTGGTATAATGTAAGGGATTAAAACTTAGGAGTTGTGTAACATGAATATTGGATTAGCGATTTTATTGATTGTCCTTGCCTTGGCTGGGGGAACATTCTTGGGCGCTTTCTTAGTGCGCAAGCAGATTGAAAAAGACTTTGCAGAAAATCCCCGTTTGAATGTAGATGCGGTGCGTGCTATGATGTCTTCTATGGGCCAAAAACCTAGTGAAGCCAAGGTTCAGCAAGTTTACCGTCAAATTAAAGCCTCTCAAAAAGAAGCGACTAAGAAGAAATAAGGATAGTGAAAGGGACTGGGATTTTGCCCAGTCTCTTTTGGAGATAAAGCATGGACAATAGACCCATCGGATTTTTAGATTCAGGCGTGGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //