Array 1 90899-90401 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FNGX01000002.1 Streptococcus equinus strain Sb09, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     90898	    36	 100.0	    30	....................................	AGCAATGACCCGACTAAATACAAGTGGGGC	
     90832	    36	 100.0	    30	....................................	CAAAGAAATCACATACCATGACGGGTACGC	
     90766	    36	 100.0	    30	....................................	CTTTGTCTTTATAATTGATTGAAACACGGT	
     90700	    36	 100.0	    30	....................................	CTAATAATTCTAATATCTTGAAAAGAATCA	
     90634	    36	 100.0	    30	....................................	TCGTATATATTGATAAGATGTCGATGTATG	
     90568	    36	 100.0	    30	....................................	AATGGCTTGATTAGCTGGAAAACAGCTTTT	
     90502	    36	 100.0	    30	....................................	ATAAGTACAAAAGGTGAATGACAAAAGGGT	
     90436	    36	  97.2	     0	..............................C.....	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  99.7	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCTAAAAC	                              	       

# Left flank :   AAAACTTTCTTTATGATTAAACCAGATGGCGTGAAACGCGGACTTGTTGGTGAAGTACTTAAACGTATTGAACGTCGTGGTTTCAAAATTGAAAAATTAGAAATGCGTATGGCAACTCCTGAGTTGTTAGAAAAACACTATGAAGACTTGGTTGACCGTCCATTCTTCCCACTAATCGTTGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATGTCAGGAGAAGAAGTGATTACTTCTTGGCGTACAATGATGGGTGCAACAAACCCTAAAGAAGCTCTTCCAGGAACAATCCGTGGTGATTTTGCTCAAGCACCAGCTGAAGGCGCTGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCAGTCGAACGCGAAATCGCCCTTTGGTTTGGGGAATAAAATAATTAAATAAGGAATCATTCGGAGCTGAAGTCAGGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAATGGTCCACGAG
# Right flank :  GTTGTATCTACTAAATATGAATATAACAAAACCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCGATGAATTGAGTTTTTATTATCTTTGCTTAAATAATAACGCTTTCTGCAAAAATTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATTGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGCATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAACTACACAGCTAAAGATGGCGAAACTTA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-5.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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