Array 1 3901599-3903015 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020885.1 Xanthomonas citri pv. citri strain TX160149 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 3901599 31 100.0 37 ............................... AAATGCTTTCGACGCGCATAAAGCGCTGGCGCAGGAG 3901667 31 100.0 35 ............................... CTGTTCAAGCTCCGCCGCCTGATCCGCTTGCCGAG 3901733 31 100.0 34 ............................... CTCGGGTTTCGGGATGTGCTTCAGATCTGCGTCG 3901798 31 100.0 35 ............................... CGCTGCACGGATGCGCCAGGCGGCGAGGCGATCAT 3901864 31 100.0 36 ............................... TCGAGCGCATCGATGACGGTCACCCATCCCCCAATG 3901931 31 100.0 36 ............................... GTGCCACCGACAGCGACGCACGTGGACCTGCAGATC 3901998 31 100.0 34 ............................... CTCTCTCACGCCGCGCGTGCGAGATCCTGCGTGC 3902063 31 100.0 36 ............................... GCAGACTGCCGAGGCCGGCATGCTGGAGGGGCGCCT 3902130 31 100.0 37 ............................... GGGTTAACAACGCCTTGAAACGGCTTTGCCGCGACGC 3902198 31 100.0 35 ............................... GCCATCATGCTTTGAATGCGCTTACCCACGGCGAA 3902264 31 100.0 35 ............................... GCGGATATGTGATTAGACCCTTTTACGACTTTCAG 3902330 31 100.0 34 ............................... TTCGCTGGCATCGGTGGATGGAGCCTTGCGCTTC 3902395 31 100.0 34 ............................... TCATTGAACCCAAGGACCACTTCGCAGGGCGACT 3902460 31 100.0 34 ............................... TTGACCACATGTTCTCTCTGTGGGAGGAAGGCAC 3902525 31 100.0 34 ............................... TGTCGAGCGCGCACTGCTGCCGCGATGGCCGGAA 3902590 31 100.0 34 ............................... GGCTGGGAGCGTTACAAGTTTGAGCAGCCCGTAG 3902655 31 100.0 35 ............................... TGGTTCAGGGCTGGAAAGACTTGGATGCCCGCATC 3902721 31 100.0 34 ............................... CTGACTATCCCTGCATAGGCCACGACCTGCGAGG 3902786 31 100.0 36 ............................... AAGAAGACCAGTCTGCGGCGTCGCGGCATCCTGGGG 3902853 31 100.0 34 ............................... CTGAGTTCGTCGCCGTCCCGGTCGTCTGACGCGT 3902918 31 93.5 36 T...........T.................. CATGCCATATGCGGCGAGATCGCACAGCAGAAGGAA 3902985 31 96.8 0 .G............................. | ========== ====== ====== ====== =============================== ===================================== ================== 22 31 99.6 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : GACGCGGCTCAAGTCCCATGATGATTCTTGTAAGCTAGGACGTCAGCACCAGCTCTCCCGGGGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGGGACCGTGGCCAGCGCGTGCAGTTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTACGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAAAAAAAAAAAATAAATACATAGCGGATTCACGGGGTCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGGG # Right flank : CAATTTAAACTCGCCCCGCCAGCCGGACGCTGACGAGGTGCAGGTTGGACATGCTTGAGGCCTGCGTATGGCAAAGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGAACCATTATTTGACGATGATGGTCTGAGGCGTGCCTGCAGGCTTGCCGTCCACCATGACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCAGCCACCTGGCCATCCTGGTAGGTCAGCTTTGCCGACACGGCCACGTTGCTCGCGCTGCCGTCCGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTCGCCGGGGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACACTGGACACCGTCACTGCGCTACCCGTGGCAGCACCGCCATCGGTGCTGGCCGCACCGGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //