Array 1 38073-33891 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIOC010000017.1 Dorea longicatena strain MSK.10.4 NODE_17_length_77218_cov_366.938, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 38072 30 100.0 37 .............................. AAGAGATACTAACAAAAATGGATATGCTTTCAGCAAC 38005 30 100.0 34 .............................. TCCTTTGGTTGCAGTGACGGTACACTGTCTATTA 37941 30 100.0 33 .............................. TATTCTTGCAAGACCTACACAGCCACCTAAATA 37878 30 100.0 37 .............................. TGCATTTTGCAATATGTGTCGAAATCTTCCTTCCTTC 37811 30 100.0 34 .............................. AAAAGAATTACTCGATATATTTAAGTTTTACAAT 37747 30 100.0 36 .............................. ATGTTTCTCTGTGTTGTGCAACAACAATCTGAAATC 37681 30 100.0 35 .............................. CAGGCAGACACCATAAACGTTCCAACGTCTGTTGC 37616 30 100.0 34 .............................. TTCCCTTCTATAATCATTCCATTTCCATCATACC 37552 30 100.0 34 .............................. TTGTTTACACGTCTTGCAAAACCAACGGACACAG 37488 30 100.0 35 .............................. ACATTTCCAACTCTTCTGTCTACGCCAGACGATAA 37423 30 100.0 36 .............................. TATTGTCAGTGCCGGATTCTATCCCAAACCTTTTTT 37357 30 100.0 35 .............................. GAGGAAACGCTTGTCGGAAGTATTACAAGCGGAAA 37292 30 100.0 34 .............................. TAATGGAAAAGAATACAAAGATGCTTATGTAATG 37228 30 100.0 36 .............................. ATCTGTTCTATACGGTTGTCCTGTTTTTCTTTTGGT 37162 30 100.0 35 .............................. CATACTTACGATACCGATGAAATGTCAAAACTGAT 37097 30 100.0 34 .............................. GCTACAGAGGATTTGCGGAATGAGACACCGATGG 37033 30 100.0 35 .............................. GCATTAGCAATGTCAAATTCTACAGTCTTTTGGTC 36968 30 100.0 37 .............................. ACAAGGCTGAATCCGGGGCGAATATGGCAGTAACATC 36901 30 100.0 35 .............................. CTGAGGAAGTATTAGGTTCTCAGTGTGCGGATAAG 36836 30 100.0 34 .............................. GATTACAGAGCCGTGTTAGATATTCTTTGTGCTA 36772 30 100.0 34 .............................. TCCCGGAAGAAGCGGAAAAGGTAAAAGCTGTATT 36708 30 100.0 36 .............................. CAGAATCCTAAAAAATTCAACAAGAATCCTAAAAGG 36642 30 100.0 35 .............................. ACGCATAAAACATCAAAAAGTGATTTTGCCGTATT 36577 30 100.0 34 .............................. GACGAATTTACTATTGCTAACAATCCAGACATTC 36513 30 100.0 34 .............................. GCATTAATGCAAGTTTCGCATAGCCGAACCCCTG 36449 30 100.0 34 .............................. GACGAATTTACTATTGCTAACAATCCAGACATTC 36385 30 100.0 34 .............................. GCATTAATGCAAGTTTCGCATAGCCGAACCCCTG 36321 30 100.0 34 .............................. GACGAATTTACTATTGCTAACAATCCAGACATTC 36257 30 100.0 36 .............................. CAAGAGATACAGCAGAAGAATGCGAAGAAGAGTTTG 36191 30 100.0 35 .............................. TAGCTTCGTTTCCGCTTCATAGAATCCCCCTTCCC 36126 30 100.0 33 .............................. ACTGTCCGATCAGATATCCGGCTGTGAAATCCA 36063 30 100.0 35 .............................. GCCCGTACCACATCATGCAGTCCGGGAGATATTCT 35998 30 100.0 35 .............................. TCCTGTCAACAGCATTTCTGACAGCCTGTGTGTAT 35933 30 100.0 34 .............................. CTTCCATCGTATGTGTGGGTTCGACCGCCATAGG 35869 30 100.0 34 .............................. TCATATAAATTCATCTCGTCAAAAGCTCCGTTTG 35805 30 100.0 34 .............................. CCGCATTTATAAGGTCTACATTACTGCTGGCACT 35741 30 100.0 36 .............................. TATCAAGGTATGGCATATTCCATTTATCACAGATTT 35675 30 100.0 35 .............................. TGGTTCATAGTTCTCCTTTCCGTGATTCACACATT 35610 30 100.0 36 .............................. TATCAAGGTATGGCATATTCCATTTATCACAGATTT 35544 30 100.0 35 .............................. TGGTTCATAGTTCTCCTTTCCGTGATTCACACATT 35479 30 100.0 36 .............................. TATCAAGGTATGGCATATTCCATTTATCACAGATTT 35413 30 100.0 36 .............................. TTTCCATCCATCTCCATACCAAGACCGACTTTCACC 35347 30 100.0 36 .............................. CCGGCCAGACCATCCTCTTTGATGTTTGCATCATGC 35281 30 100.0 35 .............................. ATGATAATATCATCTTGGTTCTTCGCTTCGCTATA 35216 30 100.0 35 .............................. GAATACTACCGACGCGGCGATCCTGGCCCTGATCG 35151 30 100.0 37 .............................. CCCTTAGCGGTCTGTAATTTAACAGCTAGTTTTCCAA 35084 30 100.0 35 .............................. GACACAGGGAACGCTGTTGGAAGTCCCTGCATCCA 35019 30 100.0 34 .............................. AATCAAAAACGTTATTCTCCCATCTATTCAAATT 34955 30 100.0 36 .............................. GATGTGAGGTTGCTCGTAAATATTATGACGAGCAGT 34889 30 100.0 35 .............................. AACGGTATATCTTAGGACTGTGGTGTGTGGCCGAG 34824 30 100.0 35 .............................. TCCTGTCAACAGCATTTCTGACGGCTTGCGTGTAT 34759 30 100.0 33 .............................. CCGCTACTGATTTTATATGTATGAAAATTTTCT 34696 30 100.0 33 .............................. AGATTACAGGGAATAATGAACTGCAAAAGAGAT 34633 30 100.0 34 .............................. AAACAAGCGGCATTATAACCTCCATGCGCTAACT 34569 30 100.0 35 .............................. TTGCTTCCGCCTGTCCGGTCATGATTCCCAGATCA 34504 30 100.0 36 .............................. AAGGTTAGTTGATAAGATTTTAAAGAAATCGAAATT 34438 30 100.0 34 .............................. CACTATCAAGATATAATTTGTTTTCCTCTATTTG 34374 30 100.0 35 .............................. TATTATCGACTCCGCAAATATTACAAACCATTTTC 34309 30 100.0 36 .............................. AGCTTGAGCAGTCTCGGAGGAACAATTACCGGAACA 34243 30 100.0 34 .............................. CGTAAGAAAACAATTATAAAAAGACTTGCTAATG 34179 30 100.0 36 .............................. TAAAAGCAAATAAGACGCTACGCCGCTACTGCAAGA 34113 30 100.0 35 .............................. CGGCCTGATCTTTAAAAAGTCCGAGGCTGAGACCT 34048 30 100.0 36 .............................. AAGTGTGCGCTTATGAAAGAATCAAAGCCACTAACA 33982 30 100.0 33 .............................. ATATTCGGTGGTTGGTATTTTTATACGCATTTT 33919 29 90.0 0 ......................TG.-.... | ========== ====== ====== ====== ============================== ===================================== ================== 65 30 99.8 35 GATAAACAGTAACATGAGATGTATTGAAAT # Left flank : TCCGTTTTCATTGAAAGAAGGGATGTAATGAAAAGTAAGAAGCAGTTGAATTATAATTACGCATTCTTGTTTTATGATGTTGGTGAAAAAAGAGTACAAAAAGTGTTCAAGGTATGCAAGAAATATTTGACACATTTTCAAAAATCAGTTTTTCGAGGTGAAATGACTCCTTCGAAGTTTATTGAATTGCGTAGAGAATTGAATAAAGTTATTAATAAGGACGAGGATTTTGTATGTATCATAAAGTTAATGAATGATAATGTATTTGGTGAAGAAATATTAGGAAATGGAGAAAAAGATACAGGAGAGACGTTGATAATATAAATATTTTACCAGGTGTTATTTAAAGAAAATAAAAAAATTAGTTGTAAAATAAGGGAATATGTGTGATTATTATTTATAAAATAAAAATAGAGTATCGCCTGGTAAAAAGCTAGGAAAAGCTTGAAGATAGGGGATTTTAGATCCTCAGAAAAATGTAAAATGGCGTTAACTCGTTA # Right flank : GATAAAATAAATATGTACATTTAGTGGAAAATAAAAATGTACAATCAAGGTTAGCATGCTATTGTATTCATGGAGGTGTTATCCATGAACGAAGCATTAAAGACTCAGCTCAAAATTCTCAAATTGAGTGATATAAAACCAAACTTTTCAGAACTTGCACGGTTTTATGATCTGGATCGCAGAACTGTCAAAAAGTATTATGACGGATATGAAGGCAAAGCTGCTCACAGAGATAAATCAAGCAAACTGGATAAACATTATGATCTCATCAAACAGAAACTTTCTATCAGAGGTGCGAATGTCCGCGCTGTGTATGAGTTCATTCTTTCTGAGAGGGATCCAAATATCGGTATCTTTGCTGATAGATAATAATATAAGATGTATTAAAATCGACGGAATAGATATAGAACGGGCGATTTGAGAACAGATAAACAGAAATCAAGGATATTTTGAAAATAGTTGTTAAGTAATATCGGAAACTAAAAAATAAAATATAAGCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAGTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //