Array 1 159298-160521 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEOJ01000001.1 Pediococcus acidilactici strain FAM20622 FAM20622_scf0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 159298 36 100.0 30 .................................... TCACCTTGTGATTGTTCGGCAACATGATAA 159364 36 100.0 30 .................................... TGGTAAGTGTGTCTCTTGCCGCAGACTCAT 159430 36 100.0 30 .................................... TCCAAAAGCGTCCATAAATTCAGTTGAATT 159496 36 100.0 30 .................................... CCGAAAAGGAGCGTCAACGCTATAACCAGC 159562 36 100.0 30 .................................... TAACTTTACGCTGGGCTCCAGGAATCATTC 159628 36 100.0 30 .................................... CACTTGAAAAGTAAGAACTCTCTCTCATTT 159694 36 100.0 30 .................................... GAAGATAAGCAGTATTTTGATGAAACTATA 159760 36 100.0 30 .................................... ATTATCTCGCATTGATTCTGTGTAGATATC 159826 36 100.0 30 .................................... ACTAGATGAGAACAATGGCTTTGAAAAGTT 159892 36 100.0 30 .................................... TCGACTTCATGTTTACTTGGCACGTGCCAT 159958 36 100.0 30 .................................... TTGACGATTTGCCCGGGTTTCACCGTGCTT 160024 36 100.0 30 .................................... ACAACACTGCCGATGGATTAAACCGTAGTA 160090 36 100.0 30 .................................... TATAAAATTTGGCGGTTCGTGACTTCCCGC 160156 36 100.0 30 .................................... ATACTCTTTTAAACAATACCAAACACCATC 160222 36 100.0 30 .................................... TGCCAGTTATTGATGAATTCGTTGGCTTTC 160288 36 97.2 30 .................................T.. TAAATTACACGTTCATCATTAACAACATTA 160354 36 100.0 30 .................................... GTGGACTTACGACACTGCCCATGAAGTTGT 160420 36 100.0 30 .................................... CCGCATTGACCATGGAATATCCCATTTCAA 160486 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.6 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGGGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATGGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CTGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGATATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //