Array 1 26092-24872 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFHM01000012.1 Mesotoga sp. H07pep.5.4 contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 26091 30 100.0 36 .............................. ATGATCTCGTGACCCTGAAATCCTCCCATAATCGCG 26025 30 100.0 36 .............................. TGTACAGAATCGCTTCGGGGATCGTCTGAGTCCTTG 25959 30 100.0 36 .............................. TTGAAGGCAGTTTAATCATGGTACTAACTTTCGTTA 25893 30 100.0 40 .............................. ATCGGGAGAATTGGAGAGGATTGCCGAAGACATCAACAGC 25823 30 100.0 36 .............................. CTTTGAGTTTTGCGACCGGATCTAAACCGGGTTCGG 25757 30 100.0 34 .............................. GTTGTTTTTGAAGGTATTTGTAATCTTCTTCTTA 25693 30 100.0 37 .............................. TTAAGATCGATGAAAAGATACTGATTTTTCTTCCCCC 25626 30 96.7 36 ..............C............... GCTTTTGTATCTACTTCAATCAACAAAAGAATGGCG 25560 30 100.0 35 .............................. TAGAGTCTAGGTACTCGTTGTAGAACTTTTCAAGC 25495 30 100.0 39 .............................. TGAGATGAAGAAAGAACAGCTTCAATCTCAGGTTGAGGA 25426 30 100.0 36 .............................. GAAAATTCCAGAAATATAGTTCTCAATCATGAATAT 25360 30 100.0 35 .............................. AATGATGGATCGTAGATGATTGGTGCGTAGATGAA 25295 30 100.0 39 .............................. TGCGATAGACATTAGAAGGGCTGGCGTGACCTTGACCGA 25226 30 96.7 35 ..A........................... ACGGTAATCGCTTCTCTTGCATATGCAGAATCAAA 25161 30 100.0 37 .............................. GAAGCAGAACAAGACTCTGAAGAATCAGATCCTCAAG 25094 30 100.0 36 .............................. TCCATGACATCGAGAAGTATTTTTAGAGTGTTGTGC 25028 30 96.7 34 ..........................G... GTGGCAGTTATAATGGTAAATCATGCGTTGCTAT 24964 30 90.0 33 ..T.............T.......T..... GTCACTGCAATCATGTAGCCGAAGAGGTCGTCG 24901 30 96.7 0 ..T........................... | ========== ====== ====== ====== ============================== ======================================== ================== 19 30 98.8 36 GTCCCCATATATCCTTGAAGGTATCTAAAT # Left flank : TCCTTGAAGGTATCTAAATGGAGGTATCACTGCTGCTGTTCCCAAAGCCTCCATC # Right flank : CCAATCAAGTCAATACACCTCAAGAAGGAAAATCCGCAGTCTTTTGCATGAGCGAATTCTTGGTTTTTCTAGGAATCCTAAACAACTGTTTTTTGGAAAGTAGGCAGTACATTATTGGCCAAGCAAAATCCAGAACCCAGAATCAATCGCTTACCCTTAATGTTAGGGTGCTCCAATCTGCTATTTCTACCAGATTAGCGATCAAAGAATTTTTTTGCAAGAGTGAATTCCCTGTTTTTGCAAGAATTCCAAACAACTTTCCACCCGGGAGATTCTGTTAATGAGTTTTCATTCGCGAATTCCTAATTCTAAAACTCAGACCTTCAAACAACAGCAAATGACTGTGGTGAACAAGACGATCAATCATTGCCGAAGTCATCTGTTCATCGTAGAAGACTGAGGGCATAGTAAGAGTCCTTGAGCGAATTTGCGGGCTAATTCGGAGGACGGGGGACCTTTGACAGACAACGTTGTCTTCAGCAGCGTTTAGCGGGTCCTTG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCATATATCCTTGAAGGTATCTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 3309-59 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFHM01000035.1 Mesotoga sp. H07pep.5.4 contig_34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 3308 30 100.0 40 .............................. CGGCAGACTCGGAGTCTATCTTCAGAGTTGCCGCGGTGCT 3238 30 100.0 35 .............................. TCTGCTCTTCCGTGACAAGCAGGATCGCGCTTTGC 3173 30 100.0 37 .............................. TTGAGAGGATAGAAGGCTTAGAAAATGAATTGAAAAA 3106 30 100.0 39 .............................. GATTGTCGTCTTCAAAGTAGTCTTTGCGGAGGTTCCCGG 3037 30 100.0 39 .............................. TCAGAACGCGGCATCTATATCTGCGCTCCTGCGATCTCC 2968 30 100.0 38 .............................. TGGAATTCATCATGACTACAATCCGAAGGTCGAAGAAG 2900 30 100.0 38 .............................. TGGCCATTCTTCGAAGTTGGAAGGTTCTCGGCTTGTTC 2832 30 100.0 38 .............................. CATATCCCGTTTGCTATTGGTACTCGACCTTGAAATCC 2764 30 100.0 36 .............................. TTCCCTTGAGTATCCTTCGTATGGAGTCACGACTGA 2698 30 100.0 34 .............................. TCGCACCACTTCCAGATATTTCCCCACGGATTCT 2634 30 100.0 37 .............................. TGGCTGGCGGTTTCGAGCAGACAATAGACTTCGATGC 2567 30 100.0 38 .............................. CGATGCACTGGACGACGTACAGATACGGACAGCTTCGC 2499 30 100.0 38 .............................. TGTACTCTGAAAGGGGGATGAATAAATGGCTTTCTATC 2431 30 100.0 39 .............................. CGGGTACAATCCGTCTAGCGGTGGGTACGAAGCGCCCTC 2362 30 100.0 39 .............................. TTTTGACTATGACCTAGCTCCTATTAGTGATAGTTTTGC 2293 30 100.0 37 .............................. TCTTCTCGCGTGGATCCTGCCTGTCCTTGCTGCACAG 2226 30 100.0 40 .............................. GCGTGACAAAAGGCACAGAAGCGAAGCTGTCCGTATCTGT 2156 30 100.0 38 .............................. TCGAAATTGATTGTGTTGGACGGATCCCGTCTTCTCAA 2088 30 100.0 38 .............................. AGGAAGATGGAGCACGGGGCATATTGTCTGAAGGTGGA 2020 30 96.7 40 .......................A...... CTATATCACATGCGTGATAGGTTTCTTGATTAAGCAACTG 1950 30 100.0 40 .............................. GATGACTTTATCCAACCTCCAAGCATCCTGCCTATTTCAG 1880 30 100.0 36 .............................. TCTGAATCCCACCACTGAACCTACTCGCTATCGCGT 1814 30 100.0 33 .............................. TCAGAAAGGGTACTTCCGCTGGCACGGAGCAGA 1751 30 100.0 36 .............................. TCGGCATGAACTGAAACAAGCCTTGAGCTCCTTTCC 1685 30 100.0 35 .............................. TAATTAGAACAATTCAAAAGTATGAGATGCGTTGA 1620 30 100.0 36 .............................. AAGGTCCAATCACGATCGAATCAGACAAGTTCATTG 1554 30 100.0 37 .............................. CGTTGTTCAGATACCAGAACCTGAGAGACGGGATAAC 1487 30 100.0 36 .............................. TCGTATGTATGTTGCCATCTTCCAAATTGCAGGTAA 1421 30 100.0 34 .............................. TGATGCATAACAGATTCGAAGAGGCTATCGAAGA 1357 30 100.0 36 .............................. TCTTTCCTGGTTGCTCTCAAAATTCCCGAACGACAT 1291 30 100.0 36 .............................. TCCGGCACGAATACCAGCACTATATGCAATGTGCAA 1225 30 100.0 35 .............................. TAGCCTCCGAGTGCAGCTTGACGTTTGAGTTGTGA 1160 30 100.0 39 .............................. CTATTGAAACAAAGTCTGGCACAACAGTCTATGTCAAAG 1091 30 100.0 36 .............................. TATCAGAAAACTGGTAGGGTTGTCAAACGCGGGTAT 1025 30 100.0 41 .............................. TTGATGGAGTCAATGAGCTAATCAGGTCAGAAAACTATATA 954 30 100.0 34 .............................. TATATATCATCTGTCAAGTAGACAGAGTACTTGA 890 30 100.0 41 .............................. GACATTCCTGTAAATCTAGGCTTCAGAAACGGAAACATCGA 819 30 100.0 36 .............................. ATCTCTAACTGAAGAAGAGAGAGAGATTAAATTCTC 753 30 100.0 35 .............................. TCTTTAATCTAAAAGAATCACACCATTTCAACCAG 688 30 100.0 36 .............................. AGAATTGCTAACTAATCATCAACAGTGACACTTTCC 622 30 100.0 36 .............................. TTGAAAAAGATTTGCGCAACATTACAGTAGGTTATG 556 30 100.0 35 .............................. TCCTTCCAGTTGATGGGATTGACGACTATCTTGCC 491 30 100.0 37 .............................. TTGCAGCCTCGGAAAGTGTTCTGGTGTAAGATGACAT 424 30 100.0 38 .............................. TTACTTGCATCAGATTTACGAGTCTCTCAAGAAGAAGA 356 30 100.0 35 .............................. ATACTATTCAGCTTCTCGCAGAAGAAGTCTATAAC 291 30 100.0 37 .............................. TCTCCTGAATCTTTCGTTCTATGAGGCTGTGGTTTGA 224 30 100.0 40 .............................. CATGCCATATAGCCATCATCTTCTGAGCCATAGGGCTTCC 154 30 100.0 36 .............................. ACGCTTCGGGTATCTATGTAGGCATGACAATTCTTG 88 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 49 30 99.9 37 GCTTCCAGACTACCTATGAGGAATTGAAAC # Left flank : CTATGAGGAATTGAAACACCCCAAACACGAGAAAAGCTTTTATCTGGTTTGCCC # Right flank : CCGGCAGACTCGGAGTCTATCTTCAGAGTTGCCGCGGTGCTGCTTCCAGACTACCTATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 41539-42095 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFHM01000032.1 Mesotoga sp. H07pep.5.4 contig_6, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 41539 30 100.0 37 .............................. CTTGGCAAAACATAAAAAACGTCAGATTCTGTGCTAG 41606 30 100.0 36 .............................. ATTCGCAATTATCCAAAATTTGTTTCCTGTAATTGC 41672 30 100.0 37 .............................. TCAATATCGATACAGTTCCCCTCTGGATCTCGGATGC 41739 30 100.0 36 .............................. AAAATCAGGGCGCTTACCGCTAAGAGAAAATCCTAC 41805 30 100.0 36 .............................. GAGATAGTAGGCTATATCCGATTCATTCTCTGACAG 41871 30 100.0 35 .............................. GTGAAAGGGGGTTTCCAGTAGCAAGTTACTTCGTG 41936 30 100.0 35 .............................. GTTTTCAATGTCGAATATGCGGCCAGGATTGGATA 42001 30 100.0 35 .............................. TGAACGTATTGATACTTTGATTAGGGATCTTACTG 42066 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 100.0 36 GTCCCCATATATCCTTGAAGGTATCTAAAT # Left flank : TGGTGGTAGTGATGTATGTTCTTGTGGTTTACGATGTTGCGGTAAAAAGAATAGACAAGATTAGAAAGCTTCTCAAGAGGCAGCTGAACTGGGTTCAAAACTCTGTCTTCGAAGGAGAATTAACCTCTGCTGGATTTGAAGCAATGAAGAAAGCTATTTCCAGAGTAATAAAGAAGGACGAAGACAGTGTATTGATCTACAAGATAAAAGATGAGAAATGGGTTAACAAAACCGTTATTGGTCTTGAAAAGGCGGACACGAAAAACTTCTTATGATTGAACTCTCGTCGGCTGAAATTCCTTCGTCATTTTGTTGCTAAAAGAGTGATTCTAAGTTCTCGACAAATGCCTATATCCCCTTTTTAAAAGCCCTTTCAGCATGTCGTCGGGTCCCAAGGAGATTCGCATCATGACAGCCCGACGATAAAGATAACCACTTTCTTTTGAGAGAATCGACTGCCGTCGGCTATAATTGGATGTAATAAGCCCTATTTTCGGGGG # Right flank : TGAAATAAAGGGGGATTGCAGCTCCGGCAACTTGAGTCCCCATATATCCTTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCATATATCCTTGAAGGTATCTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 256135-257237 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFHM01000031.1 Mesotoga sp. H07pep.5.4 contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 256135 30 100.0 36 .............................. TGGTTGGGAGCTTGAGGCTTCAGGAGAAGTATCCCG 256201 30 100.0 37 .............................. AAGCGCTGGATTTTTTGCCCAGCAAGAGCTAGAGTAC 256268 30 100.0 38 .............................. CGACATCTAATCATGGCCTAAGAAAGCCCGAGTATTCC 256336 30 100.0 38 .............................. CCCGCAAGCCACTCTCATTCGCTGGCCATTCGTGTTCA 256404 30 100.0 35 .............................. CCGGATGGGAGACTGGAAAGGAACTTGGCAATTGG 256469 30 100.0 37 .............................. AGCTGATCCAGGAATGTATCTGTCTTGAGACCTGCGA 256536 30 100.0 38 .............................. CGGATATCTGGGTCGAAGAAGCAAGCGAGATCACTCAG 256604 30 100.0 36 .............................. TCTGATGAGCCCACGGACTCTTTCCCCTGAGTCTCA 256670 30 100.0 39 .............................. TGCCCCTTGTGTGGGCGCACCTGGTACAGCGCAGCCGAA 256739 30 100.0 35 .............................. TTTGATTGCCATTGAGACAGCCGATCTCCATGTCC 256804 30 100.0 36 .............................. TTGCCTTTCTCTGCGGCCTTCCACTGTAATCGTCTT 256870 30 100.0 41 .............................. TGCAACTGCCGCTTTCAAAAACATAGCCGCAAAGGGCGAAA 256941 30 100.0 36 .............................. CCTCCTAGCATGAAAAAACCGCCCGAAGGCGGTTAA 257007 30 100.0 37 .............................. GAGAAAGAGGAGGGCCGGAACGATGGCATGCGATAAA 257074 30 100.0 38 .............................. TGACGTAATCGATGATGACGAGAGAGAAGAACTTGAGG 257142 30 100.0 36 .............................. TTGGATTGTTGAGTATGTCGCTTTTGAATCGTCCGA 257208 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 17 30 100.0 37 GCTTCCAGACTACCTATGAGGAATTGAAAC # Left flank : CTTTACAAAATAGAAAAGCAGATAACAGGCGAGCGTGGATACATTCCCTGGAAGGAATAAAGTGTGTTCATTCTTCTCGTCTATGACATTGGTGAAAAGAGAGTGAACAAAGCTCTAAAAATCTGTAGACAATATCTGGACTGGGTTCAGAATTCCGTATTTGAGGGAGAGCTAACAAAGGCAGGCCTCGAAACACTCAAGAAACGCCTAGGAAAAATAATGAACAAAGAAGAGGATTCTGTAAGAATCTACAAGCTCAGGTCAGAAGATTACTTAACCATGGAAATACTCGGAATAGATAAGAAACAAGTAGCTGACGACGGAATTCTTTAGCTCCGTCGACCCCTGATAAATTGAAAACACCTGGGGATCGACAGAAGCATATCAATTCAGCTCTTCAGTTTTGTGTGCAATTCATGAGAAAATAGTCTTTGAAAAACAGGCAAAAACTCATATTGCCTCAAAATGCTGAAAATCCTTTATAATCTATATAGTAATGG # Right flank : CTGGGCCAAATGGCTCTCCAATGAAAGAATCGTCTTGCTTCCAGACTACCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 14934-10485 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFHM01000021.1 Mesotoga sp. H07pep.5.4 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 14933 30 100.0 35 .............................. CGCGCCTGATGTAACCGGCTGGGAGCTTGAGCAGC 14868 30 100.0 36 .............................. CAAAACTTTCCACCCAGTTGCAAAGACTCACGGGGA 14802 30 100.0 37 .............................. TGTGGAACTCATGAGAATGGTCGATCTCCTGCTTCTC 14735 30 100.0 36 .............................. GATTATTTGGGAAGAGGAACAACAGAAGAAGATCAA 14669 30 100.0 43 .............................. TGTAGCAGATGCGGTTTAGTTGTTCAGCAGCTATGAGGGTTGA 14596 30 100.0 38 .............................. TAAACTCTGAGGAGGTGAATGAATGAAGATCTTCACAA 14528 30 100.0 35 .............................. TGTAAGAGATGATGAAAGAGACGACCGCGATTATC 14463 30 100.0 34 .............................. GATTGAAAACTCGAACAGCACAATGCGACATTTG 14399 30 100.0 40 .............................. TCGGCAATTTATTGTGAAATTTGACGGAAATCATAGATAA 14329 30 100.0 37 .............................. TGCGTGTAGAAAAGGCAAAGGCACTCATGCTGGTGTC 14262 30 100.0 38 .............................. CTGGCGAATCATCACGCATTGAGAAGATCGAAGAAGAG 14194 30 100.0 38 .............................. TGTTGCTCACGAGAGAACTAACCCAGTCAGCAACCTTG 14126 30 100.0 37 .............................. TTCTCTTGTTGAAATACCAGCGAATATCCCTGTGAAA 14059 30 100.0 38 .............................. ACGATTCCCTTTGCATCAGATGGTTTCACTCGCTTCTA 13991 30 100.0 39 .............................. TCTTCTTCGTCATAATCATCTGCTGGTTCTTGCTTCTGG 13922 30 100.0 39 .............................. CCTTCTTTTAGGACGGCCGAAAGAGCCGGATAGTCACTC 13853 30 100.0 35 .............................. AGTCTTGTCTATGACATCCTTCAAATGATCAATCG 13788 30 100.0 35 .............................. CGAATGTGATGTCTGATTGCTCCTTCTTCTACTTC 13723 30 100.0 40 .............................. TCGGGGAATGTAATAGAAAAGCCATGAGCGCATCTCTATG 13653 30 100.0 38 .............................. CCGAAATAACTAACCTAACGTAACAGGGAGGTACTTCA 13585 30 100.0 38 .............................. TGTACTCTGAAAGGGGGATGAATAAATGGCTTTCTATC 13517 30 100.0 38 .............................. TACACCATGAAAGGAGGTGAGACAGTGAAAATAATCAA 13449 30 100.0 36 .............................. TTGAATCTCTGGCAAGTTTCGCAGCGAAGTATTCGG 13383 30 100.0 34 .............................. ACCGTCCAAGGTCACAGTATGCACCCTAGGTTCA 13319 30 100.0 38 .............................. GGGGAAGCAATCAACATGGGGCAAGGCTCATATGGAAA 13251 30 100.0 36 .............................. CTTTCTCAGAGAAGTGCTTCTCTTCGGCTTCCTTTT 13185 30 100.0 35 .............................. TCTTGATGTTTGCTTGTGCGGCGTCGATATCCTTC 13120 30 100.0 36 .............................. TCGTGTCGTTGAGTACGATTCACGGGTACCCCGGTT 13054 30 100.0 39 .............................. TTCCTACATCCAGTGAGTTGAGGCCAGCAATAATCTTCT 12985 30 100.0 36 .............................. TTCTATGATTTTGATATCAAGGAATGTACATCATGA 12919 30 100.0 38 .............................. GTGTTGCTGTGAACTGTACTGAAGCGGGATTGTTTGCA 12851 30 100.0 40 .............................. TCTCCTGAATCTTTCGTTCTATGAGGCTGTGGTTTGAATA 12781 30 100.0 38 .............................. TACGGAAGCACAGATGTAAGAGACGAAATATACTATGA 12713 30 100.0 38 .............................. GAAGATGGATCTATCCGGCCACCCCCGCCACGGCAAAG 12645 30 100.0 35 .............................. CCGACACCGGATCGACTGACGACACTGTCCGGCTT 12580 30 100.0 38 .............................. TCAACTACGAATCAGCATGGCGCAAACCGTTCGGTGAA 12512 30 100.0 34 .............................. TTCACAAGGTAAGGGAAGAGATAACAGAAATGAA 12448 30 100.0 36 .............................. CCTCAATTCCAAAGAAGATCCCTGGCCACTCCTTTT 12382 30 100.0 39 .............................. TCCTTGCCGTGTAAGTTGTTCCACCATAATCAATTTCTA 12313 30 100.0 38 .............................. TTTGTTTCTACAGTGGCACCAGTAACGCCGTTGATAGC 12245 30 100.0 34 .............................. CAGAAAGGTATAAGCTATCACGATGGAGTATTTA 12181 30 100.0 36 .............................. TACCAATTGATGTATGAATCAGATGCTAAACTATTG 12115 30 100.0 38 .............................. TGCAGAAGATGGTTCGGACGGGCAAGTAATGGTAGAAA 12047 30 100.0 36 .............................. CCGAAACTGATGAGTTGACTTTACCAGAATTGCTGA 11981 30 100.0 36 .............................. TTGTATAATACTACTTTGAAACTGTCAACCTTGGCC 11915 30 100.0 40 .............................. TTGCCTTGTCCCACTCCATAGTCAAACCTCCCTCAAACTC 11845 30 100.0 36 .............................. GGATCCCAAAGCGTGAAAGGCCGAAAACTGAAGTGG 11779 30 100.0 34 .............................. TCACGAACCCGACTACCCTATTACATGGAGGGTT 11715 30 100.0 36 .............................. ATGCAGATCATGAAGGGACCGATCTTGAGGCTGTAT 11649 30 100.0 35 .............................. TCGAGTAAGCAAAGGAGGAACTTCTCATGGGAAGA 11584 30 100.0 37 .............................. CGTTCGTTGACTGGTTCCTTGTGAAGTTTCCGCTTGC 11517 30 100.0 36 .............................. ATGTACCAAAATTGTTACAAACCGCGGAAAACCATT 11451 30 100.0 36 .............................. ACGTCGGGAAGACCACAACAAACATAGACCTTATGG 11385 30 100.0 36 .............................. CGTGGCGCTACTCTCTATAACTCTGTTCAGGATGCC 11319 30 100.0 36 .............................. AGCTGTTTCTCGGTCGCCACTTTCTCGACGGGAAAC 11253 30 100.0 36 .............................. TGCGCTAATAAGGTCTAACGTCAGCTTCTCCATTGC 11187 30 100.0 36 .............................. TCTCCTTGGCCTTGTTGATATTCCAAATGCCAACCT 11121 30 100.0 41 .............................. ACTTCAAAACTTTTGTTTAATCATATCACTTAATCTTTCGA 11050 30 100.0 35 .............................. TATTGTTCTCCATGAACACAAGAGCCTTCTGAATG 10985 30 100.0 36 .............................. CACGTCGAAGAACACGATTCTACCCGCGAGGGCAGC 10919 30 100.0 35 .............................. TAGACAAGGTTCAACTTCTCAAGGGCGAACCTACT 10854 30 100.0 36 .............................. ATACCTTCTCAATGCGGCACGGGGTAGAATCAAGTA 10788 30 100.0 41 .............................. GCAGATACACAAGAGACGCTATCCAGGAAGAGAGAGACCAG 10717 30 100.0 41 .............................. TCACGTACCAGTCGTCTTTCATGTCGCTTTCGAGAAGTCGG 10646 30 100.0 36 .............................. TGAAACCGCAAGAATGAGGTACTATTCGGGAAGAAG 10580 30 100.0 36 .............................. CGTTGTATGTCAGACAGATTGAAAGGTGGATTAACA 10514 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =========================================== ================== 67 30 100.0 37 GCTTCCAGACTACCTATGAGGAATTGAAAC # Left flank : GAGTGGAAACTGATGAATCGAAAGGCTGCGTTCAGGTTGCTCAGATTGATCTAGATGGATATGATATTGAACTAAACGAGGAATTTCCAGTAATAAAACTCTCAAGATCTCATTCGGCAATCTCCCACGTGCTCGCCGACAATCAAATAGATAGCTCTGCCTTAAGTGGCAACATAGAACCTCTTATTGGACTTGAAACAACTAGAGAAGAGAGATTCGGAGCAGAAATCTCAGCAGCTCAAATATGCTGGACACCTGGTACTAAATTCAGTAAAGATCATACTTTTTTGATAGGCGAAAAAGGAATCTGGAAATCCAAATCCTGATTTACTTCTCCGTCGACCCCTGATAAATTGAAAACACCTGGGGATCGACAGAAGCATGTCAATTCAGCTCTTCAGTTTTGTGTGCAATTCATGAGAAAATGGTCTTTGAAAAACAGGCAAGAACTCATATTGCCTCAAAATGCTGAAAATCCTTTATAATCTATATAGTAATGA # Right flank : TCTCAAACGGGGTTGTGGGGATAGCGGGTCGGTGGTTGGAGTGTGCCAAGATCAGTTGCAAGTTCCAGTGTGAGTTGTGAGTAGAAAAGTCCAACGAAATGGGTCTCAGGTCTCGGAAGATCAAACAAACCGGTTCTCCGTTCACCGAGGAGAGCCGTGAAGCAATAGTATCGAGATTCCGACCAGGAGCTTTGTCGGAAGAACGGAATCTAGCCTTTTCGGAATAACCGTTAATTGTCATCCCGGACTTGATCCGGGATCTGTTCCAAGAACGAACAACCTGGACGCGCAGCGTCGGAACGAAGAACCAGTCTTCCCGAAGGACGGATTCATGGTTTTGGACGAAGGACGGCACTTCCCGGCGATCAGCAGGTCTTATTGAACTCGTAAGTCCCCATTTTGCTTTCCGACAAAGTCCGGACTCGCCACCGAAGGTTATTGGCTTCTCGATTTCTATTCCTCTCATCAGAAGATTGGTAAACTCTCGAAAAGGTTTCTTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 2 25307-23439 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFHM01000021.1 Mesotoga sp. H07pep.5.4 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 25306 30 96.7 36 C............................. ATCTCTCGATCTCTTTCTTCATATCTTCCTCGGTCA 25240 30 100.0 36 .............................. CAAAGAATCCATCTTCTCCCTTCCACCAGAGAACAT 25174 30 100.0 34 .............................. TACCGTCTAAGAATATTCTCAAGGTATAGTTGCT 25110 30 100.0 35 .............................. TTGCGTCGGAAAACTCTTCTTTCTTCTCGTATTCG 25045 30 100.0 35 .............................. TTAGTAATATCAGAGCGATAGATGGCGGCAAAAAC 24980 30 100.0 35 .............................. CAGTATTTTTGAGATAAATTGAGCTAAGAACACCG 24915 30 100.0 34 .............................. AGTAATACCAGCCTTTTGAATTTGGAATGTTTCG 24851 30 100.0 36 .............................. TCGCCGTCTGGTGAACAATGCTCATCTGATCGCGTA 24785 30 100.0 36 .............................. GCGACATGGGAAACATCTCAGGCTACGCGCTCAAAC 24719 30 100.0 37 .............................. CCACAAGCTAAAGAAGAATCTGAGAGACGATCTCTGC 24652 30 100.0 35 .............................. TTAGTAATATCAGAGCGATAGATGGCGGCAAAAAC 24587 30 100.0 38 .............................. CCATTACAGCCGAGCACGCCTATTACGGATTCGGCAAT 24519 30 100.0 36 .............................. TGCAGTCGGCGTTGCATGGGACTATAACGCCGAATC 24453 30 100.0 36 .............................. GACATTGACTCTCACGACTTGGCAGATGTTGATAAG 24387 30 100.0 34 .............................. GCAGTTATAGGCATAGCATAGAATACAGTCAAGT 24323 30 100.0 38 .............................. CCGATTGCAATTTCCGGGAATTTCTTAGCCTTATCAAT 24255 30 100.0 33 .............................. CCCGTATTCAAACACTTGATCATTGAAAATTGC 24192 30 100.0 36 .............................. TAGCTGATCTCTTCGCTGATGATCAAGTCAAGAAGA 24126 30 100.0 36 .............................. CTCGATCGGGAAAATATGGAAGTTTCCAGATTTCTC 24060 30 100.0 36 .............................. CATAAGTCTGCTATACCTCATTAGAGATATAGCAGT 23994 30 100.0 36 .............................. TGTTCCTGGTTAGTTCTGAGTATTGAACTCATGTGT 23928 30 100.0 36 .............................. TGTTTATCTTTTCTCCAACTTTCCAGGAGAGCCCCT 23862 30 100.0 36 .............................. CAGGCAAGCTGAAGGGATCCGCATAGTCCGAGACAA 23796 30 100.0 36 .............................. ATGCCTGTAATGTCTTTTCGCCTACTTTCTCTTCTG 23730 30 100.0 34 .............................. TTCTGTTTCTGGATCTTCTGTGCCACTTTGTGTG 23666 30 100.0 36 .............................. ACGTAAATACTAGATCTAATTGCATCATTTTCGATT 23600 30 100.0 36 .............................. GTTAGTTCAGTTGCAGTAGCTCTCCCGTGTTTCACG 23534 30 100.0 36 .............................. ACGTAAATACTAGATCTAATTGCATCATTTTCGATT 23468 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.9 36 GCTTCCAGACTACCTATGAGGAATTGAAAC # Left flank : TCGCACTATAGTTTAGGTTTCCACAACGTGGACA # Right flank : TCCAGAACATGGGGATGGCTGCAAGCCTTGATAGGGCTTCACAGGTTCCTAGAAAGCCGAATCCATTCATCAATAAACTGGTTTGATCGTTTCAAAAAAACAATATATGCTTGGATTTTGATTTATTTGTTACAAGAGATATAATGAATATAAATTATGCCTTGTGAAGTCTTTGCCGGAACAATTATGGATAGCTTGAATGGGGTATTAAGTTGTCACTTTCACATTAATTGTCAAATGGTGTTATACAAAGATGAAATGAGGTAATGGTTTTGCAGTTGCTTGCGATAAGTAAGGCTCCGTACTGCGTTCCTCGAAAAATCATCTTGATGCATTTGTCGCCGAACAGAATGACGAATAAGCGAGAACAATATCGCTTACTAAGGGTTATTCGACTCTCATGACAGCAGACGGGAGAAAGAAAACCTATTTCTGCAATCCGGCAGAGAAAGATTTCGCAATTCAGATTCAGGAAAACCTCAACAGAAAGGCAAGTGCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //