Array 1 1775831-1776348 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGXC01000001.1 Pigmentiphaga kullae strain K24 Ga0310531_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1775831 29 93.1 31 ............GG............... GAGATCGCCGCGTTCTGGGCGCCGCGCTTCG C [1775856] 1775892 29 93.1 32 ............GG............... AGCGGACGGGCGCTGTCGTTCGGCGGCATCAT 1775953 29 96.6 32 ...........................T. GCTTCGGGTCCAGCGTGACGAACGCGACGCCC 1776014 29 100.0 32 ............................. CGCAGGGCGTCCAGCCTTGGCTCCTGGCGCTT 1776075 29 100.0 32 ............................. GACTCGGCGCGCGGCTGGAGGCTGCGGCATGT 1776136 29 100.0 32 ............................. CAGGCGCAGCAGGAGACCGAGAATGTCCACGA 1776197 29 96.6 32 ..........T.................. AAGTTCTGCCCGTCGTAGCACTTTTGGGTAAA 1776258 29 96.6 32 ............C................ AAGGGCGAGCAGTTGAACAATCAGGCGGTGCA 1776319 29 75.9 0 ...........TCCC.......AA....A | C [1776341] ========== ====== ====== ====== ============================= ================================ ================== 9 29 94.7 32 GTGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : ATGGTGCCCCTGATGGCCTGAAGCCATCAGACCATGCAAGGCTGAAGGATGCGCTCAATCTTTCTTTGTCCATCGAAAACCGTTTCGATTTGGCCCATGACGCCGCTCATGCGGCCGGCTTGGCTGCCTTGGGACTAGAGATACCGATCAACGAATCGCTATCTGGTATTTCAGCTGTTGCCCCGGACGTAGGTTTCGGACCCTCGTGACGACAGGCCAGAGGGTTGCAGCCAAAGTCGATACACTTGGGTCGTCGACGGTTTCGATCGTTGGGTGGCAGCTTCGTATGCAGGTGGAGCAAGGTCTTGCCGCGGTTGCGAGGCAGGAGGTTCGGCGAGGTTGCTGGCTGCATGGATGTTTTGGGGCAGTCGTAGAGACTCGAGGGCTACGAAGTGCTCTAGTGTGGTGTCTTGCTTGTCGGGGGCAGGGTTCTTTAACAAAAAGTTGGTAGATTTTGGGCATCCAATTTTTTCCTTTGAAAACAAGTGGTTAGAATTGGT # Right flank : AGAGGATGGAGGAAGCAAATTCTGCCTTCCTGCGCGTCCCCCGGTACAGCTTGTCCGGACTGCCCTATGGCTGGCAGCCCGCCCCCGCAGCCCTACATCACCAGCTTCGTCGGCAACAACACCTCGAACGTGATCCCTTCCTCCGACTTGCCCGCCGTGCCGCGCTGCGAGCTGAAGTAGAGCCGGGTACCGTCGGGCGACACCGCGGGGCCGGTGATTTCGCTGTCGTCGTGGCCGACCAGTCGCATCACGGCCTGCGACGTGCCATCGTCGCGCAGCACGCCGATCTCCAGGTTGCCCGCATCCTCGGCCACCAGCATTTCGCCGAACGAGGTGATGGTGATGTTGTCCGGTTCGTCGATGCTGTGGGTCTCGGCCGGACCCAGCTTGCCGTCGAAGATGACTTCGAGGGTGCGGTGGGCGGTGTCGTAGGCCCAGATGCGGCTGTTGCGGGACGTGACGAAGAACACGATGCCGTTGAAGAACCAGATGCCTTCGGC # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : GTGTTCCCCGCGGGAGCGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //