Array 1 324867-326487 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEIT010000002.1 Streptococcus gordonii strain NCTC7869, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 324867 36 100.0 30 .................................... GAATTACCAGATCTGGTATGTCCTATCAAA 324933 36 100.0 31 .................................... CATCAAGACTTCACTTACAACGGCGAAAGCG 325000 36 100.0 30 .................................... AGCGACCCTGTAACTTCCGTAGCGGTTTAA 325066 36 100.0 30 .................................... CCATTCCTTAGAAGAGAAATAGAGCTTTCT 325132 36 100.0 30 .................................... ATACTATCGCTGTAGTGGTTGGTCATTCTA 325198 36 100.0 30 .................................... ACAATTATCTTACCTCAAATCTTTTATTGA 325264 36 100.0 30 .................................... TTGTTGATATAAATAAAATCGGAGTCTTTC 325330 36 100.0 30 .................................... TTTGTTTAGTAGGCGTAGCTTGTTCTAAAC 325396 36 100.0 30 .................................... TAAAGTGGCTATGGAGTGCTTATGAATCTA 325462 36 100.0 30 .................................... CAGAGAAGGTCAAGTCTATTAAGGGTGTAT 325528 36 100.0 30 .................................... CACTCACCAACTTTAATTTCAATGGTCTTT 325594 36 100.0 30 .................................... TTTCGCAAAATCCTACGCATTCATGACCAG 325660 36 100.0 30 .................................... TCCCAGAAAATAAAAAAGGCCGAATCAAAG 325726 36 100.0 30 .................................... TTTTGATATACTATACATAAGCCCCCAAGG 325792 36 100.0 30 .................................... CTAAAAGACTTGAAGTAGACCACATCAAGC 325858 36 100.0 30 .................................... TTTCTTCTTGTTAAAAATTATGATGCATGT 325924 36 100.0 30 .................................... TACATACAAGTTATTTTACGAGTGGCTCAA 325990 36 100.0 30 .................................... TAACCTGCCTCTTCAGCCAATCCCTGCGCT 326056 36 100.0 30 .................................... CGTACATAAGTCGATGAATATTTCAGGCGC 326122 36 100.0 30 .................................... TCTTGCTTGCCCTGTATGACATTCCATACC 326188 36 100.0 30 .................................... TTACGAACCGAAAAAGACTGATAGCCCCGA 326254 36 100.0 30 .................................... GAACAATTCTTTCTGCTCTTGCGCTTGGCT 326320 36 100.0 30 .................................... CGAGCATTGGATTGAATTGGTAAGAACATT 326386 36 100.0 30 .................................... TTAACAATCGAATTTAGCGCAGAGATCCTT 326452 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAGCTTAATGACAAGCCAGAAGTCAAATCCATGATTGAAAAACTGGTAGCTACGATTACAGAATTGTTAGCATTTGAGTGCTTAGAAAATGAACTAGACCTAGAGTACGATGAAATCACCATTCTAGAGTTAATCAATGCTCTAGGAGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTATCCAGGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGACCGCCTATCTATCAGAGGATGAGTTAATAAATCTGATAGAGTATATCCAACTCAATCAACTGAGAGTCTTATTTGTTGAACCTCGAAAAGTCTATGATTTCCCGCAATATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAAGAATTGGAACTTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : TAATATTAAGATTTAATTCAATTCAACCATATTAGCTAGAGGTTGGTGGGGAGTTCAAATGAGAAAGCAGATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGTGTTCCTTGGTCTACAGTAGCGGACCTTAGAAAAGGGAAAACCAGTATCGATAAAATGGCCCTGCTTACAGCCGAGAAATTAAATGATTTTGCGGAAGAATTAGAAGCGGAAAAGGACGATAAGTTTTACAATTAATCTATCCAAAAACAACCACCTATTTAGGTGGTTTTTTCAGTATCTATCACTGCTTACTAGAAGAAGAACTTGAGCTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTACGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //