Array 1 54164-53463 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSP01000232.1 Streptomyces scopuliridis RB72 contig-121000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 54163 29 100.0 33 ............................. GGGTGGGTTCCTGAGGACCGTGACGCGGAGGAC 54101 29 100.0 32 ............................. GACCACCGCACCCGCGCCCCGGCTGCTGCGCT 54040 29 100.0 32 ............................. GTGACCCGGGACTCGGAGGGCGCCACGGTGTA 53979 29 100.0 32 ............................. GAGCCCTGCCTCCCGAGCTTCCTCACGTGCCG 53918 29 100.0 32 ............................. CTCGTACTCGCGGGCGAGCCCGTAGTCGTAGG 53857 29 100.0 32 ............................. TCCTCGGCGCTGAAGAAGGAGCCGATCAGCAA 53796 29 100.0 32 ............................. CGCTGCGACCTGTGCGTCCACCGGCAGGAGGG 53735 29 100.0 32 ............................. TCGGCGGAGGCCGCGGCGAGATCGGCTGCCAG 53674 29 100.0 32 ............................. TGACGGTCCTTGACCTGCTGTTACGGGGTTCA 53613 29 96.6 32 ......A...................... TACCGGCTGGTGCGGCCGGTCGGCGGTCAGCA 53552 29 100.0 32 ............................. TGCTGCGGGAAGCCCATGCAGCGCGACGGCGA 53491 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 12 29 99.7 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GGCCACGAAGTAGCCGCAGGACGCAACTACGGAGACGCCGACGAGGCGGTCATCTGGTGACCGTGATCGTCCTCACCAACTGTCCCGCCGGCCTACGGGGGTTCCTCACCCGCTGGCTCCTGGAAATCTCCGCCGGTGTTTTCATCGGCAACCCCTCAGCAAGAATCCGCGACATCCTCTGGGAGGAGGTCGAGCAGTACGCAGGCCAAGGCCGCGCCCTACTTGCCCATACCACCAACAACGAACAGGGCTTCACCTTCCGTACCCACGATCACGCCTGGCATCCCGCCGACCATGAAGGCATCACCTTGATCCGACGCCCGGACACCAACACCCGCCCGGTAACCGCCGAACCGCAATCCGGCTGGAGCAAAGCAGCCAAACGCCGCCGATTCGGAAGAGGCTGACCCGATCCGACGTCACTTTTGAGGGAAATGTCGAATTCGATGAAAGTGCTTCAGAACCGGTTTCCTCTGCGCTAAAACCCCAGGTCACGGAGT # Right flank : GTCTCCGCGGAGACGGCACGGAGCCGTTCGCCCTGCTCGGCTCTGGCTCAACTTCTGTGACGCGACCACTCTCAGTGATCCGCCTTGCCTTCGAATTTCCGGGCGGCAGAGTCCAAATGGCTCGTTGGGAGAGGGCGGTAGCGCGTGTTCGTTGCCAGCGAAGGCCCGCGAAGTTCATGGCGGCGTGTGTCAGGGTCCTGGCATGACCTCGACACCGGATGGACGCCCTATCCCACCCGCACGTGCTGGCGAGCGCGCCATGCTCGAATCGTGGCTCGACTTTCACCGTGCCACTCTCGCCCTGAAGTGTTCGGGCCTCAAAGACGATCAATTACGGCTGGCCTCGGCTGCGCCGTCGTCGATGACGCTGCTGGGCCTCATCCAGCACATGGCCGAGGTGGAACGCAACTGGTTCCAACGTGTGTTCGCAGGCCAGGACGTGCACGCAGTCTTCGGGGAGAGCAACGTCGACGGCTTTGCACTTGAGGATGGCCGAGGAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 63789-64731 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSP01000232.1 Streptomyces scopuliridis RB72 contig-121000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 63789 29 96.6 32 ............................T CCGGTTCTGCTGGACCCCTACGGAGGCCCGCA 63850 29 100.0 32 ............................. TCTGCCCCGGTACGGATACGTCCGTGCCGGGG 63911 29 100.0 32 ............................. CACCTGGGCCGTGAGCTGCACCTGATCCTGGG 63972 29 96.6 32 ............................T TCCGGTAAAGGTTATGCAGAAGTACCGCAAAA 64033 29 100.0 32 ............................. GCCTCGGGGTCTGCGTCTCCTTCGAAGTATTC 64094 29 100.0 32 ............................. GGGGGTAACGCCGTGGCTGTCCGTACCGTTCG 64155 29 100.0 32 ............................. CGCGGGGAGCTGGCGGGGGATGTACGGCTGAA 64216 29 100.0 32 ............................. GGCCAGGGCCGCATCCTCTGTACGGCTCTTCA 64277 29 100.0 32 ............................. GCGTTTCCCTGCCCGCCTGAGCGCCTGCGGGC 64338 29 100.0 32 ............................. GCGGTGTCCTCCGCCTCGCCCACCGCGCGGGT 64399 29 100.0 32 ............................. GCGTTTCCCTGCCCGCCTGAGCGCCTGCGGGC 64460 29 100.0 32 ............................. GCGGTGTCCTCCGCCTCGCCCACCGCGCGGGT 64521 29 100.0 32 ............................. GCGTTTCCCTGCCCGCCTGAGCGCCTGCGGGC 64582 29 100.0 32 ............................. GCGGTGTCCTCCGCCTCGCCCACCGCGCGGGT 64643 29 100.0 32 ............................. TGCTGCCACGGGTCGAGGACCAGTCCGGCGCG 64704 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGCCAGCCACACGCACAGCAGCCGGGCATCCCGCGCCCCGCCGGGCAACGCCTTGGCGATCAGAGCCCGCACGTTCTCGGGCAGCCAGTTGTCCCACAGCAGCCCGGCCACCGCCGCACTGTCCGCCATATGCCGCCACAGCGGTAGCCACCCCTCAGTGTCCCGATCGTGCTTGGCCCACACAGACCGCACGGGTCCCACGAGCCGGCCCCCAAGCCCCTCACGAGGCTCCTCCATCTCAACGGTCATGGCAGATGAATACAGGTAAACCACCCACCAAGACGGCCATATACGAAAAACATCCGTACACAACACCGCCCCGGATAAAATCCCCGCGGTGGTTCAGGGCAACCCCTACCATCTGGCGTTGCCCTAACCCGACGGGCCGCCGCGCACAAGCACAGAGACCCACACAATGCCCCCTACACACCTTTTGCCGGAATTGATGGAACTGCTCGGAAACCACGCCCGCCGTGAGTAACGCAGCAGGTCACGGAGT # Right flank : C # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5275-4392 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSP01000043.1 Streptomyces scopuliridis RB72 contig-42000000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5274 29 100.0 32 ............................. GCGGTGTCCTCCGCCTCGCCCACCGCGCGGGT 5213 29 100.0 32 ............................. TGCTGCCACGGGTCGAGGACCAGTCCGGCGCG 5152 29 100.0 32 ............................. GACCCGACCTTCGGGCAGGTTCCGCTGGACGC 5091 29 100.0 32 ............................. TCGCAACGGCGGCCCCGGCCACGAGGCCATCG 5030 29 100.0 32 ............................. GACCGGCCCGATGGACTGCCCCACACTGTCGA 4969 29 100.0 32 ............................. TGGCCGGATTCATGGACGAGATCAGAGGCGCC 4908 29 100.0 32 ............................. CACGAATCCCCGTCCTCGACCAGCAGCACCTG 4847 29 100.0 32 ............................. AGGCCGTTCAGCAGCGGGTGTTCGCCGGGCTG 4786 29 100.0 32 ............................. ACCTGCGCACAGATGGTCGCCGACGCCTGGGA 4725 29 100.0 32 ............................. CCGAGTCGCCGCGTGCCGGCGAGGTCGACCTC 4664 29 96.6 32 ............................T ACGGTATCCCTCTGCCGTATTCATGGAGGGGA 4603 29 100.0 32 ............................. AGGACCGCGTCGCCGTCCACGACCATCAGCGG 4542 29 100.0 32 ............................. GTGTGGCCGGGCAGACCGAGCCAGAACCGTTC 4481 29 93.1 32 .........A...T............... CAATTCGCCTGTCCCGGGGCCACTCATCCCGT 4420 29 93.1 0 .............T...........C... | ========== ====== ====== ====== ============================= ================================ ================== 15 29 98.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CCCGCGGGGATGGTCCCGCGTTTCCCTGCCCGCCTGAGCGCCTGCGGG # Right flank : AGGTAGCTGAACCAGCCGAGGCCGTGGGCTTCCTGCTTACCTCATCCTCGGGGGCCCGTCGAGTCGAACATGGCCGCCCGGGATGATCGTCTCTCCCAATTGCCCCTCGGGAATTCTTCCGCTGCCGCCAGCATTCAGTCATTCAATAGCACTATTGGCACCGGAGATGGCACCCATAACCCCGCATGTGCGGGGAGCACATATTGCTACCAACCAAAAAGGGGCCATCCCTTGAAGCAAGGGAACTTCATCGGATTCATGATGACAGGTCACTGACCGCCGACACCCAAGAGCGCGAGGAGACTTGCTACGCCGAAGGGCTGAACCCTGCTGGATTCAGCATTGGAACCGACCCGAAGCCCTCTCAGCAGGCACTACCCTCCGCGTATGCCTTTCCGAGGTCTCTACCAACTAAAAAGTTCAGATCACGGGCTCCGTCTCGTTAGAGACGACCGCCGATGACTGATCGTCGTGTCACCTCAGATCTCCGGTCCCGATGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //