Array 1 275-28 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEAO01000052.1 Micrococcus luteus strain DE0323 NODE_52_length_392_cov_235.346505, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 274 36 100.0 34 .................................... CAGGGCATCAACCGTGTACTCGCCCCCATGTGGG 204 36 100.0 35 .................................... GGCGACTGGGAGACGAGCGGCAACCGCAACCCTGA 133 36 100.0 34 .................................... CCGGCGCAGTGGTGGTCCGTGCAGGACTACCTCG 63 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 4 36 100.0 35 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : GCGTCCACATCCGGAACGACGTGCCCAGTCACCGTGCGCTACACCACTCTATGGGGCACTACTGGGAGCGGACTTCGTTGAGGCCTGGCCGTCGCCAACGACCCGGACGAGGCCCTC # Right flank : CGTCGACGGGCGCTTCATGTACGCCGCC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [13.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 28-777 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEAO01000005.1 Micrococcus luteus strain DE0323 NODE_5_length_148953_cov_183.904560, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 28 36 100.0 34 .................................... TGCGTGTAGGAGCCGCCCAGGTGGCCGGCCAGAA 98 36 100.0 39 .................................... GGTGCGCAGTGCGTGGACCCTGCCCTGCATTATGGTGCG 174 36 100.0 35 .................................... TGGTTGCGGTTGATCCATTCCACGCCTGCCGCCCG 245 36 94.4 34 ......C................G............ GCAAGCGGCGGGCCGCGATGACCGGCCCCATCCC 315 36 97.2 35 ...........C........................ GGGGTGCCCGGCTTCCACGTCATCGTGGACGTCAG 386 36 100.0 34 .................................... ATCAAGGGTCTCGGCGCGACCGCCGCCCCCCTCG 457 36 100.0 37 .................................... AGGTCGAGGCCCGCGTCGGTGGGGTGTGCCCGGGTCG 530 36 100.0 35 .................................... CCGGGCGGGCCGTCCCGGAAACGAAACATCTCGCG 601 36 100.0 36 .................................... TCACGGAACAGGGCGACGGCGGAGAACCGTTGACCG 673 36 97.2 34 ............T....................... GAGGAGTCGGTGGTGCTGATCGGCCCGCCGCGCT 743 35 88.9 0 ............T..................-..CT | ========== ====== ====== ====== ==================================== ======================================= ================== 11 36 98.0 35 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : AGGAGCCGCCCAGGTGGCCGGCCAGAAG # Right flank : TCTCTAGGTGTGATGTCCAGGGAGGTTGTTGAGCCTGGTGGCAGGCGCGGCGCCGATCGCGGAGTGGACGCGATGATGATTGTAGAAGTGCAGCCATCCAGGCAACGCGGCCCTGCGCTCCGTCTCTGAGCTGTAGAACCGGGCGTAGGCCCACCCGTCAGCGAGCGTGCGATGGAACCGCTCAATCTTCCCGTTCGTCTGCGGCCGGTAGGGCCGAGTCCGCTTGGGCTTGATCCCGAGCTCGGTGCAGGCATCACGCCAGGCATGCGAGTGGTAGGCCGAGCCGTTGTCCGAGAGCACCCGCTCCACCTCCACGCCCAGGCGCGCGAAGTGGGCGACCGCGCGGCGCAACACCGCGATGGCCGTCTGGCTGCGTTCATCGGAGTGCATCTCGACATAGGCGAAGCGGGAGTGATCATCGATCACGGTGTGCAGAAAGCCCACCCCGAGCCGGGGCTGGTATCGGGCATCACGGGTTCCTTCGCGGTCCGAGGTCGCCG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [11.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //