Array 1 271-959 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQOE01000101.1 Salinivibrio socompensis S10B contig101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 271 28 100.0 32 ............................ AAGCTCTGCGGCATAACGCGCCAAGGTCCGAT 331 28 100.0 32 ............................ ACGTGAGTGGGACGAGAACCGCGGCGAGTATC 391 28 100.0 32 ............................ ACCTGCTTTTTGAGCTTGGCGCGTGCTTTTAA 451 28 100.0 32 ............................ GGACAGATCGAGCTGTTGGCTGGCTTCGTACA 511 28 100.0 32 ............................ AGTGAGTGTTGCCGATTTATACTCGCCGTCTT 571 28 100.0 32 ............................ TCGTCGCGGGCATAGACGTTAGGCAGGAAAAT 631 28 100.0 32 ............................ GTCCTCATTGGCCGGACACTCTGCGACCCACA 691 28 100.0 32 ............................ CCGACTGATTGCGCGCAGCAAGCTGAAAAAGC C [709] 752 28 96.4 32 A........................... CTGAATCGGAAGCACTCGAAAGAATGACGCCC 812 28 100.0 32 ............................ AAGTAACGTTAGATTTGTTCTTCGCTTGGAAC 872 28 100.0 32 ............................ ACGCTGAGCCGCAAAGAGCTGATTGCCATTTA 932 28 85.7 0 .....................G...GTG | ========== ====== ====== ====== ============================ ================================ ================== 12 28 98.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTGAATGGGATCGATACACTCGAATTCGGTGGTCAGAGCTTCATAACCGGTGTACGAGAACACCAACGACGATTGCTGAAACTATTGGGTCAGTTATACGAAACGGTTTATTCCTAAATTAGGTGCGGAAACTCGGGTCGTTCACTGCCGCACAGGCAGCTTAGAAAGCCCCGACAATGCAGCCAAGGCCGCAGAMGACAAGTHCGTCWMCTGCCGCAGCAGGCAGGACGTTTAGAAAAAGACCCGGACGGCCGGGGTCAGGGTTGGATTG # Right flank : GACACAAGCCCCGGCGCAATGTTGGATATGGGCACATTGCCAACGGGCGCCAGTTGCACTGCGCGCGGCATACATCGTGATAATAATTGGCCTTGTGCTGGCGCTTATGCCGACCTACGAACAGGCAGCGTCGATGACACAAGCCCCGACATATGGTTGGGTTTATCTCCGCAGCTGCTTTGAGTTTTCCTCCTTACCAATGTTTCTCTCGTCGTTGATGCCTGTCTAGGTTTTCCATAGAAATGACTAATTTAACGCATCCTTGAGTCAGTTAACTTTATGACCTTACTTTAATCGTTGAATTTATTTCTATTGAGTAATCAAAAACTAATCGACGTGGAGACCATTCCTGTCCAGCTTTTTTTAATTGATGGCGAGAATCTATTCTACGATAAAACGGTAGCGACATTTTGGTCGATGTTGTCTGTTGTTGAGTGGTAGGAGTGGAATATGAACATCAATAACACCATGAAGTTAGTGTTTTTTATTATTGGTGCCGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4043-3655 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQOE01000241.1 Salinivibrio socompensis S10B contig241, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4042 28 100.0 32 ............................ GCTGTAAAACGCACGCCAAAATCCGCAACAGT 3982 28 100.0 32 ............................ ATGCCAATTTCAGCGCCAAGATACTCAAGAAC 3922 28 100.0 32 ............................ CATTGGCACAGCATTTCCCACGTCAGCGCAGC 3862 28 100.0 32 ............................ AATAACCGCGATGACAGAACAAATCGCTTTGT 3802 28 100.0 32 ............................ TTGTTCAACGTTAGTGTCGGTGATAGCCATGC 3742 28 100.0 32 ............................ GTCATAAATGCTTCGTCAATCATGCTGACGAT 3682 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGAGGCAGGTTGA # Right flank : AGCAGGCGTTAAAAGTGCTGTTAGAAGAGGTCGTTCCGTCATTCCGCAGCCAATTAATGAATTAAAATAGTGTGATCTAGCGATCATTTACAGATTTTAGTGTCACAGACCTCTTGACCGTGGTCCCCAGTTTTGATCTATTACTGTTATTTAACGGTCGCTTATTATGCCTGCTCCTCAACCTGTTATTAAACGTCTCGATCACCTAGGCTAATCGCTGCTTTCTGTCATGAAATTGGCTTACCAGATATTATCGACCGTATCATTCCTAAGTACTCCGAGCACAAGGTTTCGCATGGTGATGCCGTCTTAGCGATGATCCTAAATGGGCTGGGTTTTCATAGTAGAACCCTGCATATGTTCTCCGATTTTTTCGAAACGAAACCCGTCTCCAAACTGCTAGCCAAAGACATTGAAGCGCACCATTTAACGGATGATGTGCTTGGGCGCACGCTTGATGCTTTATATGAAGCAGATGTATCCGTACTTTATCAAGTGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 226-18 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQOE01000088.1 Salinivibrio socompensis S10B contig88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 225 28 100.0 32 ............................ ACGCGGCTGTTTGAGTCGCAATTCGGTATGCC 165 28 100.0 32 ............................ ATTTTGCGGTCAAGTCCGGCGTGACCGCAAAC 105 28 100.0 32 ............................ TGCTCGTCAGCGTCTTCGCAACCGTCAAACCC 45 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATATGCACCTCCTTGGTATCAAGCCCACATAAGTACGCATAAGGTGAGGAACGCGGATCAATGAGAGCGGATGAGTAAATACCCTCTATTACCCTTCTTTTTTGGCTCTTTAAAAATAAACTGTAAATACAGTTAGTTACGGAAGGCTATTTTTAACAAGGGTAAAAGGCAATTTTTATCCTAATCGCCTGTTGTACCCGAGATTCCGCAGCTATTTTTAGAATTAATTTCGCCGAAGATGCCGACACGTTCGTGACAATTTCGAAATCTTGCTGCCTTTGAGGAACTAGCAGAGAGGCATGTGATTTTTGATGACGAGCCACGTTTGACCTCCTGATAGTAGTGAGAGATAGTTTAACCGAGTATTGATATCAGAAACCGACTTAGGTAGCCACCATTGAATGACCTAGCCACTCGTTACGTGATGGGCGTCACGTAATTTATTAGATAATTAGGTGCGGAATGACGGTTGTACCTGACGATTATTACGTTATTCTATA # Right flank : AATATACTTTTACATGTT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //