Array 1 249069-251776 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIUCB010000004.1 Klebsiella pneumoniae strain 1613163991 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249069 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249128 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249189 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249250 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249311 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249372 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249433 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 249494 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 249555 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 249616 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 249677 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 249738 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 249799 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 249860 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 249921 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 249982 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 250043 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 250104 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 250165 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250226 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 250287 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 250348 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 250409 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 250470 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 250531 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 250592 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 250653 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 250714 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 250775 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 250836 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 250897 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 250958 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 251019 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 251080 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 251141 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 251202 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 251263 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 251324 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 251385 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251446 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 251507 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 251568 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251629 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251690 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 251748 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //