Array 1 148390-145734 **** Predicted by CRISPRDetect 2.4 *** >NZ_VVYK01000012.1 Bacteroides caccae strain BIOML-A26 scaffold12_size180485, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 148389 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 148312 47 97.9 30 ..............C................................ ATAACAAGAACGGGGAAAGTGATAAGGCCG 148235 47 100.0 29 ............................................... TGGCAGATGGTAATGACGGCACGGACGGT 148159 47 100.0 30 ............................................... ATATCCGGGACACAGTAAGAGACACAATCC 148082 47 100.0 30 ............................................... TACGATAACCAGAAGATTGAGCATCATACA 148005 47 100.0 30 ............................................... CAATACCCTTACAATAAACCATTGATTGAT 147928 47 100.0 29 ............................................... ACTCATATAAGGATTATATCCGGCTTCTT 147852 47 100.0 30 ............................................... TAAGTAGCATAGCTAACCTACCAGAGGTTG 147775 47 100.0 30 ............................................... CAAGGAAGGCGTAGAACTCACCGAGCAAAC 147698 47 100.0 30 ............................................... ACAAGTACTAAATCTTCAAGAAGAAGTAAT 147621 47 100.0 29 ............................................... CCGCGCATGCTTGATAATACTACCGACTA 147545 47 100.0 30 ............................................... CGGACACTGATAGATTTGCGCGTATCAATA 147468 47 100.0 29 ............................................... AGCATGGTTAGTTAGAATGCAAGAAGAGT 147392 47 100.0 30 ............................................... AGATATGTCCAAAGTAAAATTTCCAATATT 147315 47 100.0 30 ............................................... TATAAAACAAAAAGACGTAAGATTAACAGT 147238 47 100.0 29 ............................................... TTTCGCTCTATTTGGGTAACGTCTATTTG 147162 47 100.0 29 ............................................... AAATAAGAAATCTCTTTAGCAGACCGCGT 147086 47 100.0 30 ............................................... CAAACAATGCGGACAAACGCCGCATTTAAC 147009 47 100.0 29 ............................................... AGCAGCATGTGGAAAATGCTACGAATGTA 146933 47 100.0 29 ............................................... CATTAAATAAGGATTCAATCCAGCTTCGT 146857 47 100.0 30 ............................................... GAAGTACAAGAAAATAAAAAGCAAGAGGTA 146780 47 100.0 30 ............................................... CGTATACACATCTAATTACATCGAAAGAGC 146703 47 100.0 30 ............................................... CTAATCGGAGTCATTACAACGCTAACAGTA 146626 47 100.0 30 ............................................... AATAATATTAACGCACCTATTAAAGATAAT 146549 47 100.0 30 ............................................... CAGCAGCGTGCGGGAAATGCTACGAATGCA 146472 47 100.0 30 ............................................... GCACTACCTGGAGATGTACATGAAATTCAG 146395 47 100.0 30 ............................................... TACTTCATTATAAACAGACCGAGAAAATAA 146318 47 100.0 30 ............................................... AAGCCAAACAAAATAACAATACTTAAAATT 146241 47 100.0 30 ............................................... ATGTCCGAGGACCATATTCTGATACACCGT 146164 47 100.0 30 ............................................... GTTACATAACATCCAACATTACAATTCACT 146087 47 100.0 30 ............................................... TTCAATTTTTTCTGTGTCTTCTCGATATGG 146010 47 100.0 29 ............................................... ATGGATAAAGACTAAATGTTTCAAAGGTG 145934 47 100.0 30 ............................................... TTAAATTAAACATTCAACCAAAGAAGAAGT 145857 47 100.0 30 ............................................... TTGTTAGCCTTAACAAAGACGGTTCATTTC 145780 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 35 47 99.2 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : TTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATACAAAAAAATGTATGAATTGAATAATTTGAACTATAGAACAACATATTATGGTATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : ACAATCGCCATTAGCCGCTGTATTTCAATAAGTTAGATCACAATATAGAAAAAGAAAATGAGCTGTAAATTCATTAAAAAATCCCGTAGTCTTACGGGATTTTTTATTCAAAATAACTCTAATTGTTGTCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAGCT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //