Array 1 381-2450 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBV010000537.1 Acinetobacter bereziniae strain KCJ3K44 NODE_537_length_2657_cov_5.130830, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 381 28 100.0 32 ............................ TAAGTTCAATGCCCGGGGTACTCCTTTCAATG 441 28 100.0 32 ............................ ATCCTTTTCGAGCGAGCGCACAACCAGTACCA 501 28 100.0 32 ............................ ATGAACCGATCGAAAAGAGTAACTGTAGTAAT 561 28 100.0 33 ............................ ATTGCTTCACCTACCTCACCAACAAAGTTTTCA 622 28 100.0 32 ............................ TAAATTGGCTATGCATTATATTCACATTTCTC 682 28 100.0 32 ............................ CGCAGGGTCACCAGTTGAGAAACGAGTGGGAT 742 28 100.0 32 ............................ AAAAATGGCGTTTGAATCCGCAAATGTTTGAT 802 28 100.0 32 ............................ TACGACTTTGTATGTAAATGATGATGAAACAC 862 28 100.0 32 ............................ GTAATGCAGTCATTACGCCTTTCTAGTCTTAA 922 28 100.0 32 ............................ AATTTGTCCAACCCGGTACGTTAATTGGTTTT 982 28 100.0 32 ............................ AAATGCTTGGTAATGGTGCTGTGACTGGTGAT 1042 28 100.0 32 ............................ ATTAAACCAATGGTGATTATCAAGACTGCGAA 1102 28 100.0 32 ............................ TTTAATACTCTAATTGCCTTTTCGACTTCATA 1162 28 100.0 32 ............................ TTGAACACCAACAAAGAGAGGTAATTCATCAA 1222 28 100.0 32 ............................ AACCCTTCAAAATCAGCAATTAAATACATACT 1282 28 100.0 32 ............................ TTAATCTGAACGTAAGGTTCATAGGCTGAATC 1342 28 100.0 32 ............................ ATAAGGACGTGTGATGTGATAATGACAACCGA 1402 28 100.0 32 ............................ TAATGTTGTCAATAGCCGTACTTTTAGCGGTT 1462 28 100.0 32 ............................ TTGAGCAATTTTTTCGGCTTGCGCATCGTCAT 1522 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 1582 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 1642 28 100.0 32 ............................ TGTGTCCGCAACCAGTGTTTCACGGATAATCG 1702 28 100.0 32 ............................ GACAGTAAAAGTTAAACCCTTGCCATTTATGC 1762 28 100.0 32 ............................ TAAAGAGTGCTTAACTCGATATGATGATTTTT 1822 28 100.0 32 ............................ AGTAAAACAGGGTGATTTCTCACCCTAAAATT 1882 28 100.0 32 ............................ TAATACACCCATTGGAAGATTGACTTCCTCTG 1942 28 100.0 32 ............................ AATGCAGGGGGTAGACCATGTCTCCAGAACAA 2002 28 100.0 32 ............................ ATAGGCACGTTGAACAATTGCAGATTCAATTC 2062 28 100.0 32 ............................ AGAGTAAAAACAATGAAGCGGATAATGCACAA 2122 28 100.0 32 ............................ TTATCAAGATTTTCAATATTCTTGCAGGTTTT 2182 28 100.0 32 ............................ AATCAACCATTAAAAAGGTTGTAAAAGATATG 2242 28 100.0 32 ............................ AATAGCACAGGCAATTATACAAACTGAAAGTG 2302 28 100.0 33 ............................ ATTTACATAGTTCAGCTTAGTGATTAATTGGTA 2363 28 100.0 32 ............................ TACCAATATTTGGGATGATGGTACATTTACTT 2423 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : ATATAAAAATAATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATAG # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 228-2177 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBV010000595.1 Acinetobacter bereziniae strain KCJ3K44 NODE_595_length_2216_cov_8.368597, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 228 28 100.0 32 ............................ ATTAACAATTATCGATACTGATGAAAATAAAA 288 28 100.0 32 ............................ GGTTTCGCCCTGGCTAAACAATAATGATATAA 348 28 100.0 32 ............................ GCTAGGGCATCCAGTGGGAGGCTTATCGCAAT 408 28 100.0 32 ............................ ATGTATTCATAACTACCTCAAGTCGCATCTAA 468 28 100.0 32 ............................ AACACCAATTTTGTTGCGAAAGCGTTGAAACC 528 28 100.0 32 ............................ TGTTAAGCGAGGATAATCTACGACCTGAATTT 588 28 100.0 32 ............................ ACAGTTTCAAAAGCGCACTGAATGAATTCTTG 648 28 100.0 32 ............................ ACCAACCGACGGTTGTAAAAACGGTGAAGCAT 708 28 100.0 32 ............................ TATTAATCAATTGCTTATTAAGTTCAATGCAT 768 28 100.0 32 ............................ TAAGTTTTGACTTTTTTTAATGCGTAATATGA 828 28 100.0 32 ............................ AAAGACATTGTAATCTACAAGTCGGAACGTTT 888 28 100.0 32 ............................ TGTAGGGGTTAAGACTTCGATTTTATCTTGAT 948 28 100.0 32 ............................ CAAATGATTATGTGTTTACAGTAAAAGCTGAA 1008 28 100.0 33 ............................ ATTTCGATCAGTTACAGGTTCACTCTGCATACA 1069 28 100.0 32 ............................ TATCCATTGGCACTATATCAACGTAATCTATA 1129 28 100.0 32 ............................ TGACACATATGACCCCGAATTGCCAAGTTTAG 1189 28 100.0 32 ............................ AGCAACAGGATCAATGATAACCGCATTAGCAC 1249 28 100.0 32 ............................ TAGTGGTGTTGGTATTTCTTACAGAGAAGTAG 1309 28 100.0 32 ............................ ATATAGCCGAATGCTGTAATACCAAACTTGGC 1369 28 100.0 32 ............................ TGTTTCTAAAATTTGTAATGATTCACAAATGA 1429 28 100.0 32 ............................ TTAAACAATGGAAAAACCATTTATCACCTCAT 1489 28 100.0 32 ............................ GTGAGTGTCGTTAATTCGGTCTACAATCTCAT 1549 28 100.0 32 ............................ AAACACTCCTTATCCTGATAATGTAACTCCAC 1609 28 100.0 32 ............................ ATCCTGCACCTTCTACAATTCCATAGATAACT 1669 28 100.0 32 ............................ GATCTCGTTTGATTTTGTGGTTTCTTTCATAA 1729 28 100.0 32 ............................ TTTCAGACGATGTTCTCTTGAACCTGATTTCA 1789 28 100.0 32 ............................ ACAGCACCAGTTTGCAACATCATTAACTGCCA 1849 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 1909 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 1970 28 100.0 32 ............................ ATATCTGCTGTGCTAACTGTGCTTTCTCGTTG 2030 28 100.0 32 ............................ AATATAATATCCTGTCGTGAAATTGACATGAT 2090 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 2150 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 33 28 100.0 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : TGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATAG # Right flank : AACCACGCCGTTTTCATTGAAATCGCCATAGCTGTTCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2917-66 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBV010000504.1 Acinetobacter bereziniae strain KCJ3K44 NODE_504_length_2953_cov_10.484430, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2916 28 100.0 32 ............................ TTTAAACTCAACCTCAGCACGACACCAAGGAC 2856 28 100.0 32 ............................ ACAAAAGCAGTATTCACAACAACCAGTTCAAA 2796 28 100.0 32 ............................ AAACCGTATGACACGCAAATTAGCGCAAATTA 2736 28 100.0 32 ............................ GTTTAGCCACTTTTGACAATCAGACTGCTTGA 2676 28 100.0 32 ............................ GACATAGAGCCTTTGATATATATGGAATTACA 2616 28 100.0 32 ............................ TTTTACTTTAATATTTCCAGTGATTCTTTTTT 2556 28 100.0 32 ............................ TCTAATCATGAAACTTGGTGCGAAATTGCCAT 2496 28 100.0 32 ............................ TGATTACTAAAAAAAGGAGCCTGGATAAGGCT 2436 28 100.0 32 ............................ TACTGGATGCCCTAGCGGTTATACAAGTGGTT 2376 28 100.0 32 ............................ TAACTTTACCCCTAATGTTGTCAATGCTCGTA 2316 28 100.0 32 ............................ TTAATGTGCCCGGCTGGACAAACTGGAACGTA 2256 28 100.0 32 ............................ AAGTTTTTTCGTGAAGTTCTTGTTGTTCAATT 2196 28 100.0 32 ............................ GGCTTCGCCCTGGCTAAACAATAATGATATAA 2136 28 100.0 32 ............................ GTCGCCATTTGTATCAACGTTTGGTTTGGGTT 2076 28 100.0 32 ............................ AGCTTCAAGCACCATGTACTTTCCTGCATTTT 2016 28 100.0 32 ............................ AGTTGAAGCAAAATTATGTTGATCGAGTTTCA 1956 28 100.0 32 ............................ TGCTGATGCGCTTGCATTTATCAAGCTATATA 1896 28 100.0 32 ............................ TAAACGTCTTGAATTTACACATGCATCCGTAA 1836 28 100.0 32 ............................ TTTAGACGTTCTTTTATCACCATCGACATATT 1776 28 100.0 32 ............................ AGAATCTGGAAGTATTTTAGGGAATTTTGGAA 1716 28 100.0 32 ............................ ATCAGCAATTTGCAGACAGCAGTAATATTGTT 1656 28 100.0 32 ............................ TTGTTATTTACAATTTTGTACTCTTCTGGAAC 1596 28 100.0 32 ............................ TAACAAGCCTTATGATCAGGAAGATATTCAGA 1536 28 100.0 32 ............................ AAGGCGCTTAAAGAGCAAAGACAATTTTCTTT 1476 28 100.0 32 ............................ AATGTGATTTGTAATTTATATCGTATTACATA 1416 28 100.0 32 ............................ TATAGAGCTATTGAACACGGCGATACATTCCA 1356 28 100.0 33 ............................ TGACCGTTTAATTTTTTAGCCTTCTCGGCTTCA 1295 28 100.0 32 ............................ TTGAACGGATTTAACTTTAGTTGGATTATTGC 1235 28 100.0 32 ............................ TTTATACGGCATCCAATACCCATCCAACCAAT 1175 28 100.0 32 ............................ TTAACGGCGAGATCGACGAGACTGTACGCTTC 1115 28 100.0 32 ............................ TCATCAATGATCACTTTACCTTGTAAACCGCG 1055 28 100.0 32 ............................ TTGAACCAAACCGTAAATAGCTGCGCCTGCTA 995 28 100.0 32 ............................ TGCTGCGAATACAAATGTAGGCGTCATAGCAA 935 28 100.0 33 ............................ TAGCAACTGGCAACCAAAATCTAAAGCATGAAT 874 28 100.0 33 ............................ ATCCACTCCCATTCGATAGATGCTGATCTGCCT 813 28 100.0 32 ............................ AAAGCTTCTGTGTCTTCACAAGGCGTTATTAC 753 28 100.0 32 ............................ AATTAAGGGAATAAGTAGGATAGCAAAGAGTT 693 28 100.0 32 ............................ CAAATCAAACATTAGTACCTGTCTCAGACACA 633 28 100.0 32 ............................ TGTCTGAAGCAATAAGTAGTTATATTCAGAAT 573 28 89.3 32 .......A..G......T.......... TTCTCAAATTCAATCCATTTGTTATTTAGGGC 513 28 89.3 32 .......A..G......T.......... ATATCGGGAACGTACCTGAATTTGAGCTTGAA 453 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 393 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 333 28 89.3 32 .......A..G......T.......... TAACTTGAAATCAGAATTGCTTGCAAAGTAGT 273 28 89.3 32 .......A..G......T.......... ATCCTCTTCGTAAATATCAAAACCAATTCTTA 213 28 89.3 32 .......A..G......T.......... TGCAGAAGACTATATAGACAAAACTGTCGATA 153 28 89.3 32 .......A..G......T.......... TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 93 28 67.9 0 .......A..GT...AATCC....A... | ========== ====== ====== ====== ============================ ================================= ================== 48 28 97.5 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : TCACTGTTATAACTTTATTTTTTGTTTTAAAATTAC # Right flank : ATATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //