Array 1 33614-32611 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RYXS01000058.1 Klebsiella pneumoniae subsp. pneumoniae strain GCID_CRE_0008 GCID_CRE_0008_NODE_10.ctg_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     33613	    29	 100.0	    32	.............................	CAACCTCAATTCCTAATGGCTGTCTAAGGAAA	
     33552	    29	 100.0	    32	.............................	CAGGGTTTGCCCTTTTGCACCGCGCAGCGGTC	
     33491	    29	  96.6	    32	............A................	AGCAACGTTTCCGGATTATATGGCTGGAACGT	
     33430	    29	 100.0	    32	.............................	TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA	
     33369	    29	 100.0	    32	.............................	TGGTGTTGTCCACGGTCACCCGCTGGCTGGAA	
     33308	    29	  93.1	    32	............CA...............	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
     33247	    29	  93.1	    32	............CA...............	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
     33186	    29	  89.7	    32	............CA..............C	CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG	
     33125	    29	 100.0	    32	.............................	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
     33064	    29	  93.1	    32	............CA...............	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
     33003	    29	 100.0	    32	.............................	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
     32942	    29	  93.1	    32	............CA...............	CAGCGTCTGAACGGACGAAACATCCCTGTTGA	
     32881	    28	  93.1	    32	.....-.......C...............	CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA	
     32821	    29	  93.1	    32	............CA...............	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
     32760	    29	  96.6	    32	..............A..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     32699	    29	  89.7	    32	............CA...........A...	CACTACCAGATCCGAATGGACACCCGTAATGA	
     32638	    28	  82.8	     0	............CAC........-....A	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  94.9	    32	GTATTCCCCCCGTGTGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTTTTTAAGTGATCGGAGGTTGCGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATCC

# Questionable array : NO	 Score: 5.54
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGTGTGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGCATGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [17-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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