Array 1 30656-34103 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORZZ01000233.1 Xanthomonas fragariae strain XF 61 isolate XF 61, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 30656 28 100.0 32 ............................ TGACGTTGATCTACCGGCCGACGCCTTCACGC 30716 28 100.0 32 ............................ TCTCAGTCGGCAAGACCCATGTCTATGGCTGA 30776 28 100.0 32 ............................ TACTACCAGGAGGGTTGGCCAATGAAAATCTG 30836 28 100.0 32 ............................ GAGAGTGAAAAGTGGGTTTGCAGGGCTGGCTA 30896 28 100.0 32 ............................ ATAGTGCCTTGCCCGCAAACTTACCATGTTCC 30956 28 100.0 32 ............................ ACATCCCTGGTCTTCACAGAGTAGGGGAGGTG 31016 28 100.0 32 ............................ TTGCTGCATGAAGGTGTACCCAACGCAATCGC 31076 28 100.0 32 ............................ CTCTCCTCAGCCACGGACCAATGCAATAGCAA 31136 28 100.0 32 ............................ TGCTATGGCAGAACGGCTCAGAGTTTCGTACT 31196 28 100.0 32 ............................ CAGCGCTACCAAGATGCAAGCTACCGACATGA 31256 28 100.0 32 ............................ AAAACCATTTGTGCCCGTAGAGCTTTCCATCC 31316 28 96.4 32 T........................... TCGACGACGCCGAAGAGGTTCGCCAGTGGTCG 31376 28 100.0 32 ............................ TGCGGGACGTGCTCCGGCACAGACGCGAAAAG 31436 28 100.0 32 ............................ ATACTTCGACCGTATACGAATAACGCTCTCCC 31496 28 100.0 32 ............................ TAGATACCTCTAGGGGCGCTGGCGGGGTTTCT 31556 28 100.0 32 ............................ GTATGGAAGCACCCGCTTTAGCTGTGCTGAGT 31616 28 100.0 32 ............................ GCCGGGGAGAGAGGCACACGCAGGTTTCCGTT 31676 28 100.0 32 ............................ AAACTTGGACAGACAGTGCTACGATGACTAGG 31736 28 100.0 32 ............................ AAGCAGGAAACCCTGCGGCGTGGGAAGAGATG 31796 28 100.0 32 ............................ CCCAAACGAACTGGTCCAGGCTAGGATCCGTT 31856 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 31916 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 31976 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 32036 28 100.0 32 ............................ AGGACGTTTGAGTAGCCCGGCAGGGTCTGTTC 32096 28 100.0 32 ............................ GAAGCGTCTCAAGGCGCGCCTGCTGCGGGAAC 32156 28 100.0 32 ............................ GACGCAGACAGGCGCTGCGCCGCAAGAACCAC 32216 28 100.0 32 ............................ ATGGTCGCCAGGACGCCGCCGAACGCTTCAAG 32276 28 100.0 32 ............................ CGAGACGAAGCCGAGGCACGTGCCAGAGTAGC 32336 28 100.0 32 ............................ TAGGCAGCAAAACTGTTACTAACAGGGACACT 32396 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 32456 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 32516 28 100.0 32 ............................ GCGTTTTGCGAGCCTTCGTGTTTCGACGGATA 32576 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 32636 28 100.0 32 ............................ TCCCGCCGGTCTTTTATGGGGATAGGGCAGGG 32696 28 100.0 32 ............................ TATGCCGGTGATCGGGAGAAGGCACCCGTTAC 32756 28 100.0 32 ............................ ATGATCATCAACAAGGTGCTAGCACCCAAAGC 32816 28 100.0 32 ............................ GACCACTGGATCTCGTTTAGGTCTACCGTCCC 32876 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 32936 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 32996 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 33056 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 33116 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 33176 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 33236 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 33296 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 33356 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 33416 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 33476 28 100.0 32 ............................ ATTGCATACAAAGACGGCATCATCGCCTCGGA 33536 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 33596 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 33656 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 33716 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 33776 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 33836 28 100.0 32 ............................ GTGTCGGGATCTTCCTCAAATCTTGCAGGAGA 33896 28 100.0 32 ............................ TACTGCCACAAGAACCCCGGGATCGAGGATCT 33956 28 96.4 32 ..........................C. GGGATGTCCGGATGCTGGCAGTGACGCGTTGT 34016 28 100.0 32 ............................ ACATCAAAGGCTGCTACTGAAGCTCTGGATGA 34076 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 58 28 99.9 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACACTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //